RNA–Protein interactions for RNA: ENST00000394850.6

TTC7A-202, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best) BASIC

Gene TTC7A, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-202ENST00000394850 CLIP2Q9UDT6 1046 aa17.24■□□□□ 0.35
TTC7A-202ENST00000394850 GJB2P29033 226 aa17.24■□□□□ 0.35
TTC7A-202ENST00000394850 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
TTC7A-202ENST00000394850 CFAP45Q9UL16 551 aa17.24■□□□□ 0.35
TTC7A-202ENST00000394850 MARCH6O60337 910 aa17.23■□□□□ 0.35
TTC7A-202ENST00000394850 PDE1AP54750 535 aa17.23■□□□□ 0.35
TTC7A-202ENST00000394850 C14orf93Q9H972 538 aaKnown RBP17.23■□□□□ 0.35
TTC7A-202ENST00000394850 FLIIQ13045 1269 aa17.23■□□□□ 0.35
TTC7A-202ENST00000394850 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
TTC7A-202ENST00000394850 VAMP4O75379 141 aa17.22■□□□□ 0.35
TTC7A-202ENST00000394850 ZNF165P49910 485 aa17.22■□□□□ 0.35
TTC7A-202ENST00000394850 PLEKHM2Q8IWE5 1019 aa17.22■□□□□ 0.35
TTC7A-202ENST00000394850 UBXN4Q92575 508 aa17.22■□□□□ 0.35
TTC7A-202ENST00000394850 TCOF1Q13428 1488 aaKnown RBP17.22■□□□□ 0.35
TTC7A-202ENST00000394850 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
TTC7A-202ENST00000394850 CCDC70Q6NSX1 233 aa17.22■□□□□ 0.35
TTC7A-202ENST00000394850 GAS2L3Q86XJ1 694 aa17.22■□□□□ 0.35
TTC7A-202ENST00000394850 MRPL50Q8N5N7 158 aaKnown RBP17.22■□□□□ 0.35
TTC7A-202ENST00000394850 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
TTC7A-202ENST00000394850 ANXA1P04083 346 aa17.21■□□□□ 0.35
TTC7A-202ENST00000394850 IL16Q14005 1332 aa17.21■□□□□ 0.35
TTC7A-202ENST00000394850 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
TTC7A-202ENST00000394850 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
TTC7A-202ENST00000394850 UBE2HP62256 183 aa17.21■□□□□ 0.35
TTC7A-202ENST00000394850 USHBP1Q8N6Y0 703 aa17.21■□□□□ 0.35
TTC7A-202ENST00000394850 NUP153P49790 1475 aaKnown RBP17.21■□□□□ 0.34
TTC7A-202ENST00000394850 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
TTC7A-202ENST00000394850 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
TTC7A-202ENST00000394850 CCDC186Q7Z3E2 898 aa17.2■□□□□ 0.34
TTC7A-202ENST00000394850 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
TTC7A-202ENST00000394850 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
TTC7A-202ENST00000394850 CFAP100Q494V2 611 aa17.19■□□□□ 0.34
TTC7A-202ENST00000394850 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
TTC7A-202ENST00000394850 ERICH2A1L162 156 aa17.19■□□□□ 0.34
TTC7A-202ENST00000394850 C17orf53Q8N3J3 647 aaPredicted RBP17.19■□□□□ 0.34
TTC7A-202ENST00000394850 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.19■□□□□ 0.34
TTC7A-202ENST00000394850 V9GYY5 206 aaPredicted RBP17.19■□□□□ 0.34
TTC7A-202ENST00000394850 SFPQP23246 707 aaKnown RBP eCLIP17.19■□□□□ 0.34
TTC7A-202ENST00000394850 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
TTC7A-202ENST00000394850 KIF18AQ8NI77 898 aa17.19■□□□□ 0.34
TTC7A-202ENST00000394850 CHAMP1Q96JM3 812 aa17.19■□□□□ 0.34
TTC7A-202ENST00000394850 CFAP43Q8NDM7 1665 aa17.19■□□□□ 0.34
TTC7A-202ENST00000394850 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
TTC7A-202ENST00000394850 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
TTC7A-202ENST00000394850 FBXO31Q5XUX0 539 aaPredicted RBP17.18■□□□□ 0.34
TTC7A-202ENST00000394850 ESYT1Q9BSJ8 1104 aa17.18■□□□□ 0.34
TTC7A-202ENST00000394850 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.18■□□□□ 0.34
TTC7A-202ENST00000394850 GNAT3A8MTJ3 354 aa17.18■□□□□ 0.34
TTC7A-202ENST00000394850 BIN1O00499 593 aa17.18■□□□□ 0.34
TTC7A-202ENST00000394850 NAP1L1P55209 391 aaKnown RBP17.18■□□□□ 0.34
TTC7A-202ENST00000394850 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
TTC7A-202ENST00000394850 PATL2C9JE40 543 aaKnown RBP17.18■□□□□ 0.34
TTC7A-202ENST00000394850 PRIMPOLQ96LW4 560 aa17.18■□□□□ 0.34
TTC7A-202ENST00000394850 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
TTC7A-202ENST00000394850 USP26Q9BXU7 913 aa17.18■□□□□ 0.34
TTC7A-202ENST00000394850 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
TTC7A-202ENST00000394850 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
TTC7A-202ENST00000394850 POLR3GO15318 223 aaPredicted RBP17.17■□□□□ 0.34
TTC7A-202ENST00000394850 URI1O94763 535 aaPredicted RBP17.17■□□□□ 0.34
TTC7A-202ENST00000394850 ZSCAN22P10073 491 aaPredicted RBP17.17■□□□□ 0.34
TTC7A-202ENST00000394850 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
TTC7A-202ENST00000394850 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
TTC7A-202ENST00000394850 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
TTC7A-202ENST00000394850 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
TTC7A-202ENST00000394850 TSC1Q92574 1164 aa17.17■□□□□ 0.34
TTC7A-202ENST00000394850 COL17A1Q9UMD9 1497 aaPredicted RBP17.17■□□□□ 0.34
TTC7A-202ENST00000394850 KIF14Q15058 1648 aa17.17■□□□□ 0.34
TTC7A-202ENST00000394850 CCT2P78371 535 aaKnown RBP17.16■□□□□ 0.34
TTC7A-202ENST00000394850 TMX1Q9H3N1 280 aa17.16■□□□□ 0.34
TTC7A-202ENST00000394850 ZMYM4Q5VZL5 1548 aa17.16■□□□□ 0.34
TTC7A-202ENST00000394850 SETQ01105 290 aaPredicted RBP17.16■□□□□ 0.34
TTC7A-202ENST00000394850 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
TTC7A-202ENST00000394850 ISM2Q6H9L7 571 aa17.16■□□□□ 0.34
TTC7A-202ENST00000394850 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
TTC7A-202ENST00000394850 ACBD3Q9H3P7 528 aa17.15■□□□□ 0.34
TTC7A-202ENST00000394850 CWC15Q9P013 229 aaKnown RBP17.15■□□□□ 0.34
TTC7A-202ENST00000394850 RUFY1Q96T51 708 aa17.15■□□□□ 0.34
TTC7A-202ENST00000394850 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
TTC7A-202ENST00000394850 ESCO1Q5FWF5 840 aa17.15■□□□□ 0.34
TTC7A-202ENST00000394850 PTPRCP08575 1304 aa17.15■□□□□ 0.34
TTC7A-202ENST00000394850 CPA1P15085 419 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 UVSSAQ2YD98 709 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 LEKR1Q6ZMV7 388 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 NOL7Q9UMY1 257 aaKnown RBP17.14■□□□□ 0.33
TTC7A-202ENST00000394850 FAM135AQ9P2D6 1515 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 AXDND1Q5T1B0 1012 aaPredicted RBP17.14■□□□□ 0.33
TTC7A-202ENST00000394850 TMCO3Q6UWJ1 677 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 PKP1Q13835 747 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 KRT32Q14532 448 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 CEP85Q6P2H3 762 aa17.14■□□□□ 0.33
TTC7A-202ENST00000394850 CCP110O43303 1012 aa17.13■□□□□ 0.33
TTC7A-202ENST00000394850 NOM1Q5C9Z4 860 aaKnown RBP17.13■□□□□ 0.33
TTC7A-202ENST00000394850 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
TTC7A-202ENST00000394850 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
TTC7A-202ENST00000394850 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
TTC7A-202ENST00000394850 ZBTB9Q96C00 473 aa17.13■□□□□ 0.33
TTC7A-202ENST00000394850 LRRC2Q9BYS8 371 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms