RNA–Protein interactions for RNA: ENST00000394805.7

MATR3-201, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-201ENST00000394805 PIK3R4Q99570 1358 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 CYP2E1P05181 493 aaPredicted RBP10.6□□□□□ -0.71
MATR3-201ENST00000394805 USP25Q9UHP3 1055 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 SIGLEC1Q9BZZ2 1709 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 ACEP12821 1306 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.6□□□□□ -0.71
MATR3-201ENST00000394805 USP48Q86UV5 1035 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 USHBP1Q8N6Y0 703 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 SPG7Q9UQ90 795 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 MAP2P11137 1827 aaKnown RBP10.6□□□□□ -0.71
MATR3-201ENST00000394805 ANXA1P04083 346 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 CCT4P50991 539 aaKnown RBP10.6□□□□□ -0.71
MATR3-201ENST00000394805 FLIIQ13045 1269 aa10.6□□□□□ -0.71
MATR3-201ENST00000394805 CWC27Q6UX04 472 aaKnown RBP10.6□□□□□ -0.71
MATR3-201ENST00000394805 NOL7Q9UMY1 257 aaKnown RBP10.6□□□□□ -0.71
MATR3-201ENST00000394805 METP08581 1390 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 ZKSCAN5Q9Y2L8 839 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 PTPRCP08575 1304 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 PIK3C2BO00750 1634 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 MBD3O95983 291 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 UBTFL1P0CB47 393 aaPredicted RBP10.59□□□□□ -0.71
MATR3-201ENST00000394805 CHMLP26374 656 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 PRDM10Q9NQV6 1147 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 CNPY2Q9Y2B0 182 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 HECW2Q9P2P5 1572 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 SYAP1Q96A49 352 aaPredicted RBP10.59□□□□□ -0.71
MATR3-201ENST00000394805 IL25Q9H293 177 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 PDCL3Q9H2J4 239 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 ATP10DQ9P241 1426 aa10.59□□□□□ -0.71
MATR3-201ENST00000394805 TTC12Q9H892 705 aaPredicted RBP10.58□□□□□ -0.72
MATR3-201ENST00000394805 ARHGEF40Q8TER5 1519 aa10.58□□□□□ -0.72
MATR3-201ENST00000394805 CLEC17AQ6ZS10 378 aa10.58□□□□□ -0.72
MATR3-201ENST00000394805 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.72
MATR3-201ENST00000394805 TTC21BQ7Z4L5 1316 aa10.58□□□□□ -0.72
MATR3-201ENST00000394805 PRR36Q9H6K5 1346 aa10.58□□□□□ -0.72
MATR3-201ENST00000394805 HCLS1P14317 486 aaPredicted RBP10.58□□□□□ -0.72
MATR3-201ENST00000394805 KCNJ4P48050 445 aa10.58□□□□□ -0.72
MATR3-201ENST00000394805 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.58□□□□□ -0.72
MATR3-201ENST00000394805 VPS37CA5D8V6 355 aaPredicted RBP10.58□□□□□ -0.72
MATR3-201ENST00000394805 SPC24Q8NBT2 197 aa10.58□□□□□ -0.72
MATR3-201ENST00000394805 PHAXQ9H814 394 aaKnown RBP10.58□□□□□ -0.72
MATR3-201ENST00000394805 EDC4Q6P2E9 1401 aaKnown RBP10.57□□□□□ -0.72
MATR3-201ENST00000394805 MYO5BQ9ULV0 1848 aa10.57□□□□□ -0.72
MATR3-201ENST00000394805 SRGAP3O43295 1099 aa10.57□□□□□ -0.72
MATR3-201ENST00000394805 GNAI3P08754 354 aa10.57□□□□□ -0.72
MATR3-201ENST00000394805 KIAA2012Q0VF49 1180 aa10.57□□□□□ -0.72
MATR3-201ENST00000394805 NLRP6P59044 892 aa10.56□□□□□ -0.72
MATR3-201ENST00000394805 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.56□□□□□ -0.723e-9■■■□□ 15.1
MATR3-201ENST00000394805 BRD1O95696 1058 aa10.56□□□□□ -0.72
MATR3-201ENST00000394805 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
MATR3-201ENST00000394805 ALKQ9UM73 1620 aa10.56□□□□□ -0.72
MATR3-201ENST00000394805 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
MATR3-201ENST00000394805 GIMAP6Q6P9H5 292 aa10.56□□□□□ -0.72
MATR3-201ENST00000394805 FERMT3Q86UX7 667 aa10.56□□□□□ -0.72
MATR3-201ENST00000394805 SMC3Q9UQE7 1217 aa10.56□□□□□ -0.72
MATR3-201ENST00000394805 PPP1R42Q7Z4L9 355 aa10.55□□□□□ -0.72
MATR3-201ENST00000394805 CCDC83Q8IWF9 413 aa10.55□□□□□ -0.72
MATR3-201ENST00000394805 EYA1Q99502 592 aa10.55□□□□□ -0.72
MATR3-201ENST00000394805 SRCIN1Q9C0H9 1055 aa10.55□□□□□ -0.72
MATR3-201ENST00000394805 CPS1P31327 1500 aa10.55□□□□□ -0.72
MATR3-201ENST00000394805 MCM2P49736 904 aa10.55□□□□□ -0.72
MATR3-201ENST00000394805 CASTP20810 708 aaKnown RBP10.55□□□□□ -0.72
MATR3-201ENST00000394805 WDR33Q9C0J8 1336 aaKnown RBP10.54□□□□□ -0.72
MATR3-201ENST00000394805 IBTKQ9P2D0 1353 aaPredicted RBP10.54□□□□□ -0.72
MATR3-201ENST00000394805 ATP8B2P98198 1209 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 TCEANC2Q96MN5 208 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 ADCY5O95622 1261 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 CSPP1Q1MSJ5 1256 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 RBM33Q96EV2 1170 aaKnown RBP10.54□□□□□ -0.72
MATR3-201ENST00000394805 PDLIM2Q96JY6 352 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 PHF14O94880 888 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 CAMK4Q16566 473 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 CCDC9Q9Y3X0 531 aaKnown RBP10.54□□□□□ -0.72
MATR3-201ENST00000394805 NECAB1Q8N987 351 aa10.54□□□□□ -0.72
MATR3-201ENST00000394805 AK2P54819 239 aa10.53□□□□□ -0.72
MATR3-201ENST00000394805 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
MATR3-201ENST00000394805 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
MATR3-201ENST00000394805 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
MATR3-201ENST00000394805 RGS12O14924 1447 aa10.53□□□□□ -0.72
MATR3-201ENST00000394805 FAM173BQ6P4H8 233 aa10.53□□□□□ -0.72
MATR3-201ENST00000394805 TAF7Q15545 349 aaPredicted RBP10.53□□□□□ -0.72
MATR3-201ENST00000394805 ZNF500O60304 480 aaPredicted RBP10.53□□□□□ -0.72
MATR3-201ENST00000394805 NBPF7P0C2Y1 421 aaPredicted RBP10.53□□□□□ -0.72
MATR3-201ENST00000394805 PRPF40BQ6NWY9 871 aaKnown RBP10.53□□□□□ -0.72
MATR3-201ENST00000394805 LMOD2Q6P5Q4 547 aa10.53□□□□□ -0.72
MATR3-201ENST00000394805 USP44Q9H0E7 712 aa10.53□□□□□ -0.72
MATR3-201ENST00000394805 CDK12Q9NYV4 1490 aaPredicted RBP10.52□□□□□ -0.72
MATR3-201ENST00000394805 JAKMIP1Q96N16 626 aaKnown RBP10.52□□□□□ -0.72
MATR3-201ENST00000394805 GNAT3A8MTJ3 354 aa10.52□□□□□ -0.73
MATR3-201ENST00000394805 DNM1Q05193 864 aaKnown RBP10.52□□□□□ -0.73
MATR3-201ENST00000394805 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
MATR3-201ENST00000394805 ATP7BP35670 1465 aa10.52□□□□□ -0.73
MATR3-201ENST00000394805 SYT1P21579 422 aa10.52□□□□□ -0.73
MATR3-201ENST00000394805 STX6O43752 255 aa10.51□□□□□ -0.73
MATR3-201ENST00000394805 CEBPAP49715 358 aaPredicted RBP10.51□□□□□ -0.73
MATR3-201ENST00000394805 FOSBP53539 338 aa10.51□□□□□ -0.73
MATR3-201ENST00000394805 STK3Q13188 491 aa10.51□□□□□ -0.73
MATR3-201ENST00000394805 HS1BP3Q53T59 392 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms