RNA–Protein interactions for RNA: ENST00000394576.2

PCDHGA2-201, Transcript of protocadherin gamma subfamily A, 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA2, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2-201ENST00000394576 IL13P35225 146 aa13.16□□□□□ -0.3
PCDHGA2-201ENST00000394576 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
PCDHGA2-201ENST00000394576 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
PCDHGA2-201ENST00000394576 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
PCDHGA2-201ENST00000394576 MAP3K5Q99683 1374 aa13.15□□□□□ -0.3
PCDHGA2-201ENST00000394576 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA2-201ENST00000394576 USP6P35125 1406 aa13.15□□□□□ -0.3
PCDHGA2-201ENST00000394576 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
PCDHGA2-201ENST00000394576 ATP6V1DQ9Y5K8 247 aa13.14□□□□□ -0.31
PCDHGA2-201ENST00000394576 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
PCDHGA2-201ENST00000394576 SURF6O75683 361 aaKnown RBP13.14□□□□□ -0.31
PCDHGA2-201ENST00000394576 RTL1A6NKG5 1358 aa13.14□□□□□ -0.31
PCDHGA2-201ENST00000394576 ZPR1O75312 459 aa13.14□□□□□ -0.31
PCDHGA2-201ENST00000394576 FRMPD1Q5SYB0 1578 aa13.14□□□□□ -0.31
PCDHGA2-201ENST00000394576 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
PCDHGA2-201ENST00000394576 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
PCDHGA2-201ENST00000394576 NRXN1Q9ULB1 1477 aa13.13□□□□□ -0.31
PCDHGA2-201ENST00000394576 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
PCDHGA2-201ENST00000394576 AMOTL1Q8IY63 956 aa13.13□□□□□ -0.31
PCDHGA2-201ENST00000394576 RILPL2Q969X0 211 aa13.13□□□□□ -0.31
PCDHGA2-201ENST00000394576 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
PCDHGA2-201ENST00000394576 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
PCDHGA2-201ENST00000394576 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
PCDHGA2-201ENST00000394576 DLC1Q96QB1 1528 aa13.13□□□□□ -0.31
PCDHGA2-201ENST00000394576 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
PCDHGA2-201ENST00000394576 CCDC34Q96HJ3 373 aa13.12□□□□□ -0.31
PCDHGA2-201ENST00000394576 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
PCDHGA2-201ENST00000394576 KIAA1210Q9ULL0 1709 aa13.12□□□□□ -0.31
PCDHGA2-201ENST00000394576 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
PCDHGA2-201ENST00000394576 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
PCDHGA2-201ENST00000394576 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
PCDHGA2-201ENST00000394576 TRIM27P14373 513 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 GNL3LQ9NVN8 582 aaKnown RBP13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 MYOM1P52179 1685 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 QRICH2Q9H0J4 1663 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 TPM4P67936 248 aa13.11□□□□□ -0.31
PCDHGA2-201ENST00000394576 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
PCDHGA2-201ENST00000394576 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
PCDHGA2-201ENST00000394576 NEUROD6Q96NK8 337 aa13.1□□□□□ -0.31
PCDHGA2-201ENST00000394576 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
PCDHGA2-201ENST00000394576 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
PCDHGA2-201ENST00000394576 CNNM1Q9NRU3 951 aa13.1□□□□□ -0.31
PCDHGA2-201ENST00000394576 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
PCDHGA2-201ENST00000394576 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 SEC24BO95487 1268 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 NEXMIFQ5QGS0 1516 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 PIK3C2BO00750 1634 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 HIP1O00291 1037 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 FLIIQ13045 1269 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 HOXB7P09629 217 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 ARHGEF25Q86VW2 580 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 AK7Q96M32 723 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
PCDHGA2-201ENST00000394576 FAM83GA6ND36 823 aa13.08□□□□□ -0.31
PCDHGA2-201ENST00000394576 FAM177BA6PVY3 158 aa13.08□□□□□ -0.31
PCDHGA2-201ENST00000394576 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
PCDHGA2-201ENST00000394576 NUCB2P80303 420 aa13.08□□□□□ -0.32
PCDHGA2-201ENST00000394576 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
PCDHGA2-201ENST00000394576 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
PCDHGA2-201ENST00000394576 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.32
PCDHGA2-201ENST00000394576 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
PCDHGA2-201ENST00000394576 ZKSCAN1P17029 563 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA2-201ENST00000394576 CCDC158Q5M9N0 1113 aa13.07□□□□□ -0.32
PCDHGA2-201ENST00000394576 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
PCDHGA2-201ENST00000394576 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
PCDHGA2-201ENST00000394576 CNTROBQ8N137 903 aa13.07□□□□□ -0.32
PCDHGA2-201ENST00000394576 LRRCC1Q9C099 1032 aa13.07□□□□□ -0.32
PCDHGA2-201ENST00000394576 USP21Q9UK80 565 aa13.07□□□□□ -0.32
PCDHGA2-201ENST00000394576 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
PCDHGA2-201ENST00000394576 DIP2AQ14689 1571 aa13.06□□□□□ -0.32
PCDHGA2-201ENST00000394576 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA2-201ENST00000394576 SPATA31A3Q5VYP0 1347 aa13.06□□□□□ -0.32
PCDHGA2-201ENST00000394576 RAB11FIP3O75154 756 aa13.06□□□□□ -0.32
PCDHGA2-201ENST00000394576 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
PCDHGA2-201ENST00000394576 SRGAP3O43295 1099 aa13.06□□□□□ -0.32
PCDHGA2-201ENST00000394576 MYD88Q99836 296 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 ADAMTS13Q76LX8 1427 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 CDC45O75419 566 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 NBPF6Q5VWK0 638 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 NBPF4Q96M43 638 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 CARD10Q9BWT7 1032 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 PPLO60437 1756 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 ALDH1L1O75891 902 aa13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA2-201ENST00000394576 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
PCDHGA2-201ENST00000394576 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms