RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 ZKSCAN1P17029 563 aaPredicted RBP12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 GORABQ5T7V8 394 aa12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 ABCC4O15439 1325 aa12.02□□□□□ -0.48
NKIRAS2-203ENST00000393879 SPG7Q9UQ90 795 aa12.02□□□□□ -0.48
NKIRAS2-203ENST00000393879 CCDC9Q9Y3X0 531 aaKnown RBP12.02□□□□□ -0.48
NKIRAS2-203ENST00000393879 MCM2P49736 904 aa12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 BRPF1P55201 1214 aaPredicted RBP12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 KRT28Q7Z3Y7 464 aa12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 DNAAF4Q8WXU2 420 aa12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 ZNF853P0CG23 659 aa12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 G2E3Q7L622 706 aa12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 USP6P35125 1406 aa12.02□□□□□ -0.49
NKIRAS2-203ENST00000393879 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 NUTM1Q86Y26 1132 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 NAP1L5Q96NT1 182 aaPredicted RBP12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 NLRP1Q9C000 1473 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 SDSP20132 328 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 PLEKHM2Q8IWE5 1019 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 ARHGEF10O15013 1369 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 ARHGEF28Q8N1W1 1705 aaKnown RBP12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 MSH6P52701 1360 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 IQSEC2Q5JU85 1478 aa12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 RIMS1Q86UR5 1692 aaKnown RBP12.01□□□□□ -0.49
NKIRAS2-203ENST00000393879 MYL6BP14649 208 aa12□□□□□ -0.49
NKIRAS2-203ENST00000393879 ANKRD24Q8TF21 1146 aa12□□□□□ -0.49
NKIRAS2-203ENST00000393879 KIF1BPQ96EK5 621 aa12□□□□□ -0.49
NKIRAS2-203ENST00000393879 KIAA0232Q92628 1395 aa12□□□□□ -0.49
NKIRAS2-203ENST00000393879 RAB11FIP3O75154 756 aa12□□□□□ -0.49
NKIRAS2-203ENST00000393879 PI4KAP2A4QPH2 592 aa12□□□□□ -0.49
NKIRAS2-203ENST00000393879 PI4KAP1Q8N8J0 262 aa12□□□□□ -0.49
NKIRAS2-203ENST00000393879 IP6K1Q92551 441 aa12□□□□□ -0.49
NKIRAS2-203ENST00000393879 CWC22Q9HCG8 908 aaKnown RBP12□□□□□ -0.49
NKIRAS2-203ENST00000393879 MSNP26038 577 aaKnown RBP12□□□□□ -0.49
NKIRAS2-203ENST00000393879 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
NKIRAS2-203ENST00000393879 ANXA1P04083 346 aa11.99□□□□□ -0.49
NKIRAS2-203ENST00000393879 MRE11P49959 708 aa11.99□□□□□ -0.49
NKIRAS2-203ENST00000393879 LRRC59Q96AG4 307 aaKnown RBP11.99□□□□□ -0.49
NKIRAS2-203ENST00000393879 SPATA31D1Q6ZQQ2 1576 aa11.99□□□□□ -0.49
NKIRAS2-203ENST00000393879 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
NKIRAS2-203ENST00000393879 TSHZ3Q63HK5 1081 aa11.99□□□□□ -0.49
NKIRAS2-203ENST00000393879 NRXN3Q9Y4C0 1643 aa11.99□□□□□ -0.49
NKIRAS2-203ENST00000393879 PDE1AP54750 535 aa11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 HSP90B1P14625 803 aaKnown RBP11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 CABP4P57796 275 aa11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 PPP1R42Q7Z4L9 355 aa11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 SNX21Q969T3 373 aa11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 ANKRD26Q9UPS8 1709 aa11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 ATP8B2P98198 1209 aa11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 AKAP4Q5JQC9 854 aa11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 CHPF2Q9P2E5 772 aa11.98□□□□□ -0.49
NKIRAS2-203ENST00000393879 GCP02774 474 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 RNF20Q5VTR2 975 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 SIL1Q9H173 461 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 TNPO1Q92973 898 aaKnown RBP11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 FSD1Q9BTV5 496 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 SMC3Q9UQE7 1217 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
NKIRAS2-203ENST00000393879 USP54Q70EL1 1684 aa11.96□□□□□ -0.49
NKIRAS2-203ENST00000393879 AACSQ86V21 672 aa11.96□□□□□ -0.49
NKIRAS2-203ENST00000393879 SOS1Q07889 1333 aaPredicted RBP11.96□□□□□ -0.49
NKIRAS2-203ENST00000393879 TOM1L2Q6ZVM7 507 aa11.96□□□□□ -0.49
NKIRAS2-203ENST00000393879 PRDM11Q9NQV5 511 aa11.96□□□□□ -0.49
NKIRAS2-203ENST00000393879 HYPKQ9NX55 129 aa11.96□□□□□ -0.49
NKIRAS2-203ENST00000393879 PHF14O94880 888 aa11.96□□□□□ -0.5
NKIRAS2-203ENST00000393879 OTUD7AQ8TE49 926 aaPredicted RBP11.96□□□□□ -0.5
NKIRAS2-203ENST00000393879 ZRSR1Q15695 479 aaKnown RBP11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 CWC27Q6UX04 472 aaKnown RBP11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 BABAM1Q9NWV8 329 aa11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 GLRX3O76003 335 aaKnown RBP11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 PHAXQ9H814 394 aaKnown RBP11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 HIP1O00291 1037 aa11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 LARP1Q6PKG0 1096 aaKnown RBP11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 NEUROD6Q96NK8 337 aa11.95□□□□□ -0.5
NKIRAS2-203ENST00000393879 DNTTIP2Q5QJE6 756 aaKnown RBP11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 CAVIN1Q6NZI2 390 aaKnown RBP11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 ORAI2Q96SN7 254 aa11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 SSFA2P28290 1259 aa11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 UPF3BQ9BZI7 483 aaKnown RBP11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 STRN4Q9NRL3 753 aa11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 RHPN1Q8TCX5 695 aa11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 IL17REQ8NFR9 667 aa11.94□□□□□ -0.5
NKIRAS2-203ENST00000393879 PTCH1Q13635 1447 aa11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
NKIRAS2-203ENST00000393879 RTL1A6NKG5 1358 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms