RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.21
LAMB1-204ENST00000393561 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.21
LAMB1-204ENST00000393561 PRPF40BQ6NWY9 871 aaKnown RBP13.71□□□□□ -0.22
LAMB1-204ENST00000393561 DDX11Q96FC9 970 aa13.71□□□□□ -0.22
LAMB1-204ENST00000393561 HMGB1P09429 215 aaKnown RBP13.7□□□□□ -0.22
LAMB1-204ENST00000393561 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
LAMB1-204ENST00000393561 KIF14Q15058 1648 aa13.7□□□□□ -0.22
LAMB1-204ENST00000393561 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
LAMB1-204ENST00000393561 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
LAMB1-204ENST00000393561 ZNF76P36508 570 aa13.7□□□□□ -0.22
LAMB1-204ENST00000393561 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 NEFHP12036 1026 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 ZRSR2Q15696 482 aaKnown RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 WAPLQ7Z5K2 1190 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 ANKRD18AQ8IVF6 992 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 SCAND2PQ9GZW5 306 aaPredicted RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 FAM177A1Q8N128 213 aaPredicted RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 CCDC85AQ96PX6 553 aaPredicted RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 EPB41L2O43491 1005 aaKnown RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 FILIP1Q7Z7B0 1213 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 MYD88Q99836 296 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 PAF1Q8N7H5 531 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 ABCF2Q9UG63 623 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 ABCC5O15440 1437 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 EIF5P55010 431 aaKnown RBP13.69□□□□□ -0.22
LAMB1-204ENST00000393561 CAVIN4Q5BKX8 364 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 MPNDQ8N594 471 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 NSD2O96028 1365 aa13.69□□□□□ -0.22
LAMB1-204ENST00000393561 ESPNB1AK53 854 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 PTPRCP08575 1304 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 SEPT7Q16181 437 aaKnown RBP13.68□□□□□ -0.22
LAMB1-204ENST00000393561 BICDL1Q6ZP65 573 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 SYCE3A1L190 88 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 UQCRHP07919 91 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 CFAP100Q494V2 611 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 NME9Q86XW9 330 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 DNAAF4Q8WXU2 420 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 BOLA2Q9H3K6 86 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 TMOD2Q9NZR1 351 aa13.68□□□□□ -0.22
LAMB1-204ENST00000393561 LRPPRCP42704 1394 aaKnown RBP13.67□□□□□ -0.22
LAMB1-204ENST00000393561 CUL7Q14999 1698 aa13.67□□□□□ -0.22
LAMB1-204ENST00000393561 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
LAMB1-204ENST00000393561 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
LAMB1-204ENST00000393561 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
LAMB1-204ENST00000393561 CCDC183Q5T5S1 534 aa13.67□□□□□ -0.22
LAMB1-204ENST00000393561 ZNF397Q8NF99 534 aaPredicted RBP13.67□□□□□ -0.22
LAMB1-204ENST00000393561 PHAXQ9H814 394 aaKnown RBP13.67□□□□□ -0.22
LAMB1-204ENST00000393561 ANO10Q9NW15 660 aa13.67□□□□□ -0.22
LAMB1-204ENST00000393561 HYPKQ9NX55 129 aa13.67□□□□□ -0.22
LAMB1-204ENST00000393561 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
LAMB1-204ENST00000393561 CD109Q6YHK3 1445 aa13.67□□□□□ -0.22
LAMB1-204ENST00000393561 ARHGAP29Q52LW3 1261 aa13.67□□□□□ -0.22
LAMB1-204ENST00000393561 NAPBQ9H115 298 aa13.67□□□□□ -0.22
LAMB1-204ENST00000393561 SEPT11Q9NVA2 429 aaKnown RBP13.67□□□□□ -0.22
LAMB1-204ENST00000393561 KIAA0754O94854 1291 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 KIAA1328Q86T90 577 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 TAF4BQ92750 862 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 USP5P45974 858 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 MAP3K1Q13233 1512 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 MAP3K12Q12852 859 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 ADGRL1O94910 1474 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
LAMB1-204ENST00000393561 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
LAMB1-204ENST00000393561 DESP17661 470 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 IFIT5Q13325 482 aaKnown RBP13.66□□□□□ -0.22
LAMB1-204ENST00000393561 PIBF1Q8WXW3 757 aa13.66□□□□□ -0.22
LAMB1-204ENST00000393561 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
LAMB1-204ENST00000393561 PPP1R12BO60237 982 aaPredicted RBP13.65□□□□□ -0.22
LAMB1-204ENST00000393561 PTCD1O75127 700 aaKnown RBP13.65□□□□□ -0.22
LAMB1-204ENST00000393561 ZSCAN30Q86W11 494 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 SCAF11Q99590 1463 aaKnown RBP13.65□□□□□ -0.22
LAMB1-204ENST00000393561 CAMK4Q16566 473 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 CCDC148Q8NFR7 591 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 C8orf76Q96K31 380 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 TTC21BQ7Z4L5 1316 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 JAKMIP3Q5VZ66 844 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
LAMB1-204ENST00000393561 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
LAMB1-204ENST00000393561 GOLGA6L7A0A1B0GV03 622 aa13.64□□□□□ -0.23
LAMB1-204ENST00000393561 POLR3DP05423 398 aaPredicted RBP13.64□□□□□ -0.23
LAMB1-204ENST00000393561 SLC5A1P13866 664 aa13.64□□□□□ -0.23
LAMB1-204ENST00000393561 SFPQP23246 707 aaKnown RBP eCLIP13.64□□□□□ -0.23
LAMB1-204ENST00000393561 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
LAMB1-204ENST00000393561 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
LAMB1-204ENST00000393561 LIMCH1Q9UPQ0 1083 aa13.64□□□□□ -0.23
LAMB1-204ENST00000393561 MKNK2Q9HBH9 465 aa13.64□□□□□ -0.23
LAMB1-204ENST00000393561 CTAGE5O15320 804 aa13.64□□□□□ -0.23
LAMB1-204ENST00000393561 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
LAMB1-204ENST00000393561 CTCFLQ8NI51 663 aaPredicted RBP13.64□□□□□ -0.23
LAMB1-204ENST00000393561 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms