RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 CEP170BQ9Y4F5 1589 aaPredicted RBP18.74■□□□□ 0.59
SNX11-202ENST00000393405 MSNP26038 577 aaKnown RBP18.73■□□□□ 0.59
SNX11-202ENST00000393405 TTC21AQ8NDW8 1320 aa18.73■□□□□ 0.59
SNX11-202ENST00000393405 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
SNX11-202ENST00000393405 AK9Q5TCS8 1911 aa18.73■□□□□ 0.59
SNX11-202ENST00000393405 KDRP35968 1356 aa18.73■□□□□ 0.59
SNX11-202ENST00000393405 EYA1Q99502 592 aa18.73■□□□□ 0.59
SNX11-202ENST00000393405 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
SNX11-202ENST00000393405 SLC4A10Q6U841 1118 aa18.73■□□□□ 0.59
SNX11-202ENST00000393405 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
SNX11-202ENST00000393405 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
SNX11-202ENST00000393405 CYP2E1P05181 493 aaPredicted RBP18.72■□□□□ 0.59
SNX11-202ENST00000393405 EID1Q9Y6B2 187 aa18.72■□□□□ 0.59
SNX11-202ENST00000393405 PIK3C2AO00443 1686 aa18.72■□□□□ 0.59
SNX11-202ENST00000393405 SDSP20132 328 aa18.72■□□□□ 0.59
SNX11-202ENST00000393405 DIP2AQ14689 1571 aa18.71■□□□□ 0.59
SNX11-202ENST00000393405 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
SNX11-202ENST00000393405 AMPHP49418 695 aa18.71■□□□□ 0.59
SNX11-202ENST00000393405 R3HCC1Q9Y3T6 440 aaKnown RBP18.71■□□□□ 0.59
SNX11-202ENST00000393405 USP26Q9BXU7 913 aa18.7■□□□□ 0.58
SNX11-202ENST00000393405 PDLIM2Q96JY6 352 aa18.69■□□□□ 0.58
SNX11-202ENST00000393405 CWC22Q9HCG8 908 aaKnown RBP18.69■□□□□ 0.58
SNX11-202ENST00000393405 LMBRD1Q9NUN5 540 aa18.68■□□□□ 0.58
SNX11-202ENST00000393405 ZNF500O60304 480 aaPredicted RBP18.68■□□□□ 0.58
SNX11-202ENST00000393405 ZSCAN23Q3MJ62 389 aa18.68■□□□□ 0.58
SNX11-202ENST00000393405 NOL7Q9UMY1 257 aaKnown RBP18.68■□□□□ 0.58
SNX11-202ENST00000393405 SLIT1O75093 1534 aa18.68■□□□□ 0.58
SNX11-202ENST00000393405 NUTM2GQ5VZR2 741 aa18.67■□□□□ 0.58
SNX11-202ENST00000393405 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
SNX11-202ENST00000393405 ARHGAP23Q9P227 1491 aa18.67■□□□□ 0.58
SNX11-202ENST00000393405 NLRP6P59044 892 aa18.66■□□□□ 0.58
SNX11-202ENST00000393405 MAP7D2Q96T17 732 aa18.66■□□□□ 0.58
SNX11-202ENST00000393405 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
SNX11-202ENST00000393405 CCT4P50991 539 aaKnown RBP18.66■□□□□ 0.58
SNX11-202ENST00000393405 MCTP1Q6DN14 999 aa18.66■□□□□ 0.58
SNX11-202ENST00000393405 HMMRO75330 724 aa18.65■□□□□ 0.58
SNX11-202ENST00000393405 NECTIN2Q92692 538 aa18.65■□□□□ 0.58
SNX11-202ENST00000393405 PRDM10Q9NQV6 1147 aa18.65■□□□□ 0.58
SNX11-202ENST00000393405 LRRC37A3O60309 1634 aa18.65■□□□□ 0.58
SNX11-202ENST00000393405 CAVIN1Q6NZI2 390 aaKnown RBP18.65■□□□□ 0.58
SNX11-202ENST00000393405 EXOC6BQ9Y2D4 811 aa18.65■□□□□ 0.58
SNX11-202ENST00000393405 FAM208AQ9UK61 1670 aaKnown RBP18.64■□□□□ 0.57
SNX11-202ENST00000393405 MCM5P33992 734 aa18.64■□□□□ 0.57
SNX11-202ENST00000393405 MARF1Q9Y4F3 1742 aaKnown RBP18.64■□□□□ 0.57
SNX11-202ENST00000393405 STK31Q9BXU1 1019 aa18.64■□□□□ 0.57
SNX11-202ENST00000393405 PDE1AP54750 535 aa18.63■□□□□ 0.57
SNX11-202ENST00000393405 FLIIQ13045 1269 aa18.63■□□□□ 0.57
SNX11-202ENST00000393405 ZHX1Q9UKY1 873 aaPredicted RBP18.63■□□□□ 0.57
SNX11-202ENST00000393405 HOXC9P31274 260 aa18.63■□□□□ 0.57
SNX11-202ENST00000393405 XPCQ01831 940 aaPredicted RBP18.63■□□□□ 0.57
SNX11-202ENST00000393405 FKBP5Q13451 457 aaPredicted RBP18.63■□□□□ 0.57
SNX11-202ENST00000393405 TSHZ3Q63HK5 1081 aa18.63■□□□□ 0.57
SNX11-202ENST00000393405 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
SNX11-202ENST00000393405 UQCRHLA0A096LP55 91 aa18.62■□□□□ 0.57
SNX11-202ENST00000393405 GNAI2P04899 355 aa18.62■□□□□ 0.57
SNX11-202ENST00000393405 UQCRHP07919 91 aa18.62■□□□□ 0.57
SNX11-202ENST00000393405 RBSNQ9H1K0 784 aa18.62■□□□□ 0.57
SNX11-202ENST00000393405 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
SNX11-202ENST00000393405 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
SNX11-202ENST00000393405 XRN1Q8IZH2 1706 aaKnown RBP18.62■□□□□ 0.57
SNX11-202ENST00000393405 ST18O60284 1047 aa18.61■□□□□ 0.57
SNX11-202ENST00000393405 LTV1Q96GA3 475 aaPredicted RBP18.61■□□□□ 0.57
SNX11-202ENST00000393405 CSPP1Q1MSJ5 1256 aa18.61■□□□□ 0.57
SNX11-202ENST00000393405 IL17REQ8NFR9 667 aa18.61■□□□□ 0.57
SNX11-202ENST00000393405 OSBPL3Q9H4L5 887 aa18.61■□□□□ 0.57
SNX11-202ENST00000393405 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
SNX11-202ENST00000393405 KCNA6P17658 529 aa18.6■□□□□ 0.57
SNX11-202ENST00000393405 CACNA1FO60840 1977 aa18.6■□□□□ 0.57
SNX11-202ENST00000393405 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
SNX11-202ENST00000393405 NCLP19338 710 aaKnown RBP18.59■□□□□ 0.57
SNX11-202ENST00000393405 CCDC30Q5VVM6 783 aa18.59■□□□□ 0.57
SNX11-202ENST00000393405 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.59■□□□□ 0.57
SNX11-202ENST00000393405 ZKSCAN5Q9Y2L8 839 aa18.59■□□□□ 0.57
SNX11-202ENST00000393405 SALL3Q9BXA9 1300 aa18.59■□□□□ 0.57
SNX11-202ENST00000393405 TUBGCP6Q96RT7 1819 aa18.59■□□□□ 0.57
SNX11-202ENST00000393405 ERC2O15083 957 aa18.59■□□□□ 0.57
SNX11-202ENST00000393405 REC8O95072 547 aa18.59■□□□□ 0.57
SNX11-202ENST00000393405 PKP1Q13835 747 aa18.59■□□□□ 0.57
SNX11-202ENST00000393405 PRIM1P49642 420 aaKnown RBP18.58■□□□□ 0.57
SNX11-202ENST00000393405 LRSAM1Q6UWE0 723 aa18.58■□□□□ 0.56
SNX11-202ENST00000393405 ABTB2Q8N961 1025 aa18.58■□□□□ 0.56
SNX11-202ENST00000393405 MAP3K5Q99683 1374 aa18.58■□□□□ 0.56
SNX11-202ENST00000393405 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.56
SNX11-202ENST00000393405 THEMISQ8N1K5 641 aaPredicted RBP18.58■□□□□ 0.56
SNX11-202ENST00000393405 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
SNX11-202ENST00000393405 MTERF4Q7Z6M4 381 aaKnown RBP18.57■□□□□ 0.56
SNX11-202ENST00000393405 GPT2Q8TD30 523 aa18.57■□□□□ 0.56
SNX11-202ENST00000393405 ANKARQ7Z5J8 1434 aa18.57■□□□□ 0.56
SNX11-202ENST00000393405 SMAP1Q8IYB5 467 aaPredicted RBP18.57■□□□□ 0.56
SNX11-202ENST00000393405 ZGPATQ8N5A5 531 aaKnown RBP18.57■□□□□ 0.56
SNX11-202ENST00000393405 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
SNX11-202ENST00000393405 FER1L4A9Z1Z3 1794 aa18.57■□□□□ 0.56
SNX11-202ENST00000393405 GNAI3P08754 354 aa18.56■□□□□ 0.56
SNX11-202ENST00000393405 CCDC39Q9UFE4 941 aa18.56■□□□□ 0.56
SNX11-202ENST00000393405 PRPF40AO75400 957 aaKnown RBP18.56■□□□□ 0.56
SNX11-202ENST00000393405 LRRFIP2Q9Y608 721 aaKnown RBP18.56■□□□□ 0.56
SNX11-202ENST00000393405 MBD3O95983 291 aa18.55■□□□□ 0.56
SNX11-202ENST00000393405 ATP8B2P98198 1209 aa18.55■□□□□ 0.56
SNX11-202ENST00000393405 TAF7Q15545 349 aaPredicted RBP18.55■□□□□ 0.56
SNX11-202ENST00000393405 ZDHHC9Q9Y397 364 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms