RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 ZNF445P59923 1031 aa18.48■□□□□ 0.55
SHTN1-204ENST00000392903 G2E3Q7L622 706 aa18.48■□□□□ 0.55
SHTN1-204ENST00000392903 ZNF500O60304 480 aaPredicted RBP18.47■□□□□ 0.55
SHTN1-204ENST00000392903 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
SHTN1-204ENST00000392903 SSFA2P28290 1259 aa18.47■□□□□ 0.55
SHTN1-204ENST00000392903 SLC4A10Q6U841 1118 aa18.47■□□□□ 0.55
SHTN1-204ENST00000392903 NECTIN2Q92692 538 aa18.47■□□□□ 0.55
SHTN1-204ENST00000392903 DDX49Q9Y6V7 483 aaKnown RBP18.47■□□□□ 0.55
SHTN1-204ENST00000392903 F6X3S4 739 aa18.46■□□□□ 0.55
SHTN1-204ENST00000392903 PSME1Q06323 249 aa18.46■□□□□ 0.55
SHTN1-204ENST00000392903 NOL7Q9UMY1 257 aaKnown RBP18.46■□□□□ 0.55
SHTN1-204ENST00000392903 RGS12O14924 1447 aa18.46■□□□□ 0.55
SHTN1-204ENST00000392903 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
SHTN1-204ENST00000392903 BAG4O95429 457 aaKnown RBP18.45■□□□□ 0.54
SHTN1-204ENST00000392903 MEIS3Q99687 375 aa18.45■□□□□ 0.54
SHTN1-204ENST00000392903 APBB1O00213 710 aa18.44■□□□□ 0.54
SHTN1-204ENST00000392903 RBM10P98175 930 aaKnown RBP18.44■□□□□ 0.54
SHTN1-204ENST00000392903 PDLIM2Q96JY6 352 aa18.44■□□□□ 0.54
SHTN1-204ENST00000392903 MSH6P52701 1360 aa18.44■□□□□ 0.54
SHTN1-204ENST00000392903 XPCQ01831 940 aaPredicted RBP18.44■□□□□ 0.54
SHTN1-204ENST00000392903 PTPRCP08575 1304 aa18.44■□□□□ 0.54
SHTN1-204ENST00000392903 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
SHTN1-204ENST00000392903 MARF1Q9Y4F3 1742 aaKnown RBP18.43■□□□□ 0.54
SHTN1-204ENST00000392903 CHD2O14647 1828 aaKnown RBP18.43■□□□□ 0.54
SHTN1-204ENST00000392903 C16orf71Q8IYS4 520 aaPredicted RBP18.43■□□□□ 0.54
SHTN1-204ENST00000392903 R3HCC1Q9Y3T6 440 aaKnown RBP18.43■□□□□ 0.54
SHTN1-204ENST00000392903 MTERF4Q7Z6M4 381 aaKnown RBP18.42■□□□□ 0.54
SHTN1-204ENST00000392903 DCTPP1Q9H773 170 aa18.42■□□□□ 0.54
SHTN1-204ENST00000392903 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
SHTN1-204ENST00000392903 FAM13BQ9NYF5 915 aa18.42■□□□□ 0.54
SHTN1-204ENST00000392903 KIF24Q5T7B8 1368 aa18.41■□□□□ 0.54
SHTN1-204ENST00000392903 CEP85Q6P2H3 762 aa18.41■□□□□ 0.54
SHTN1-204ENST00000392903 ANKRD44Q8N8A2 993 aa18.41■□□□□ 0.54
SHTN1-204ENST00000392903 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
SHTN1-204ENST00000392903 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.41■□□□□ 0.54
SHTN1-204ENST00000392903 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
SHTN1-204ENST00000392903 NBPF6Q5VWK0 638 aa18.4■□□□□ 0.54
SHTN1-204ENST00000392903 NBPF4Q96M43 638 aa18.4■□□□□ 0.54
SHTN1-204ENST00000392903 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
SHTN1-204ENST00000392903 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.53
SHTN1-204ENST00000392903 MCM5P33992 734 aa18.39■□□□□ 0.53
SHTN1-204ENST00000392903 ZSCAN23Q3MJ62 389 aa18.39■□□□□ 0.53
SHTN1-204ENST00000392903 RTL1A6NKG5 1358 aa18.39■□□□□ 0.53
SHTN1-204ENST00000392903 NWD1Q149M9 1564 aa18.39■□□□□ 0.53
SHTN1-204ENST00000392903 SMARCA5O60264 1052 aaPredicted RBP18.39■□□□□ 0.53
SHTN1-204ENST00000392903 CSPP1Q1MSJ5 1256 aa18.39■□□□□ 0.53
SHTN1-204ENST00000392903 TBC1D9Q6ZT07 1266 aa18.39■□□□□ 0.53
SHTN1-204ENST00000392903 RPAP2Q8IXW5 612 aaPredicted RBP18.39■□□□□ 0.53
SHTN1-204ENST00000392903 ATP10DQ9P241 1426 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 UQCRHLA0A096LP55 91 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 DYNC1I1O14576 645 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 UQCRHP07919 91 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 PLEKHM2Q8IWE5 1019 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 OTUD7AQ8TE49 926 aaPredicted RBP18.38■□□□□ 0.53
SHTN1-204ENST00000392903 RBM42Q9BTD8 480 aaKnown RBP18.38■□□□□ 0.53
SHTN1-204ENST00000392903 AK9Q5TCS8 1911 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 SMAP1Q8IYB5 467 aaPredicted RBP18.38■□□□□ 0.53
SHTN1-204ENST00000392903 IP6K1Q92551 441 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 ZKSCAN5Q9Y2L8 839 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
SHTN1-204ENST00000392903 FKBP5Q13451 457 aaPredicted RBP18.37■□□□□ 0.53
SHTN1-204ENST00000392903 TAF7Q15545 349 aaPredicted RBP18.37■□□□□ 0.53
SHTN1-204ENST00000392903 LRRC59Q96AG4 307 aaKnown RBP18.37■□□□□ 0.53
SHTN1-204ENST00000392903 GSPT1P15170 499 aaKnown RBP18.37■□□□□ 0.53
SHTN1-204ENST00000392903 NUCB2P80303 420 aa18.37■□□□□ 0.53
SHTN1-204ENST00000392903 LTN1O94822 1766 aa18.36■□□□□ 0.53
SHTN1-204ENST00000392903 CYP2E1P05181 493 aaPredicted RBP18.36■□□□□ 0.53
SHTN1-204ENST00000392903 CAVIN1Q6NZI2 390 aaKnown RBP18.36■□□□□ 0.53
SHTN1-204ENST00000392903 RBSNQ9H1K0 784 aa18.36■□□□□ 0.53
SHTN1-204ENST00000392903 LMBRD1Q9NUN5 540 aa18.36■□□□□ 0.53
SHTN1-204ENST00000392903 PODXL2Q9NZ53 605 aa18.36■□□□□ 0.53
SHTN1-204ENST00000392903 FLIIQ13045 1269 aa18.35■□□□□ 0.53
SHTN1-204ENST00000392903 CCDC30Q5VVM6 783 aa18.35■□□□□ 0.53
SHTN1-204ENST00000392903 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
SHTN1-204ENST00000392903 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
SHTN1-204ENST00000392903 ADGRL3Q9HAR2 1447 aa18.34■□□□□ 0.53
SHTN1-204ENST00000392903 CCT4P50991 539 aaKnown RBP18.34■□□□□ 0.53
SHTN1-204ENST00000392903 RABEP1Q15276 862 aa18.32■□□□□ 0.52
SHTN1-204ENST00000392903 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
SHTN1-204ENST00000392903 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
SHTN1-204ENST00000392903 GCP02774 474 aa18.32■□□□□ 0.52
SHTN1-204ENST00000392903 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
SHTN1-204ENST00000392903 CDC45O75419 566 aa18.31■□□□□ 0.52
SHTN1-204ENST00000392903 EIF2S2P20042 333 aaKnown RBP18.31■□□□□ 0.52
SHTN1-204ENST00000392903 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
SHTN1-204ENST00000392903 SASS6Q6UVJ0 657 aa18.31■□□□□ 0.52
SHTN1-204ENST00000392903 NCLP19338 710 aaKnown RBP18.31■□□□□ 0.52
SHTN1-204ENST00000392903 PHAXQ9H814 394 aaKnown RBP18.31■□□□□ 0.52
SHTN1-204ENST00000392903 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
SHTN1-204ENST00000392903 HDGFL1Q5TGJ6 251 aa18.3■□□□□ 0.52
SHTN1-204ENST00000392903 PROSER2Q86WR7 435 aaPredicted RBP18.3■□□□□ 0.52
SHTN1-204ENST00000392903 CCDC39Q9UFE4 941 aa18.3■□□□□ 0.52
SHTN1-204ENST00000392903 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
SHTN1-204ENST00000392903 GNAI2P04899 355 aa18.3■□□□□ 0.52
SHTN1-204ENST00000392903 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
SHTN1-204ENST00000392903 EXOC6BQ9Y2D4 811 aa18.3■□□□□ 0.52
SHTN1-204ENST00000392903 NFAT5O94916 1531 aa18.3■□□□□ 0.52
SHTN1-204ENST00000392903 HMMRO75330 724 aa18.29■□□□□ 0.52
SHTN1-204ENST00000392903 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
SHTN1-204ENST00000392903 RGPD2P0DJD1 1756 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms