RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

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Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 AXIN2Q9Y2T1 843 aa31.89■■■□□ 2.7
SMARCD3-203ENST00000392811 CAMTA1Q9Y6Y1 1673 aa31.89■■■□□ 2.69
SMARCD3-203ENST00000392811 AMOTQ4VCS5 1084 aa31.88■■■□□ 2.69
SMARCD3-203ENST00000392811 HDGFL1Q5TGJ6 251 aa31.88■■■□□ 2.69
SMARCD3-203ENST00000392811 ATF3P18847 181 aa31.88■■■□□ 2.69
SMARCD3-203ENST00000392811 EIF4A1P60842 406 aaKnown RBP31.87■■■□□ 2.69
SMARCD3-203ENST00000392811 PXDNQ92626 1479 aa31.87■■■□□ 2.69
SMARCD3-203ENST00000392811 C16orf71Q8IYS4 520 aaPredicted RBP31.87■■■□□ 2.69
SMARCD3-203ENST00000392811 HMMRO75330 724 aa31.86■■■□□ 2.69
SMARCD3-203ENST00000392811 N4BP2Q86UW6 1770 aaPredicted RBP31.85■■■□□ 2.69
SMARCD3-203ENST00000392811 GNAI2P04899 355 aa31.85■■■□□ 2.69
SMARCD3-203ENST00000392811 GSPT1P15170 499 aaKnown RBP31.85■■■□□ 2.69
SMARCD3-203ENST00000392811 MPRIPQ6WCQ1 1025 aa31.85■■■□□ 2.69
SMARCD3-203ENST00000392811 TBC1D9Q6ZT07 1266 aa31.85■■■□□ 2.69
SMARCD3-203ENST00000392811 RBM25P49756 843 aaKnown RBP31.85■■■□□ 2.69
SMARCD3-203ENST00000392811 TEFQ10587 303 aa31.84■■■□□ 2.69
SMARCD3-203ENST00000392811 BCL11AQ9H165 835 aa31.84■■■□□ 2.69
SMARCD3-203ENST00000392811 RGPD5Q99666 1765 aa31.84■■■□□ 2.69
SMARCD3-203ENST00000392811 DCCP43146 1447 aa31.83■■■□□ 2.69
SMARCD3-203ENST00000392811 PXDNLA1KZ92 1463 aa31.83■■■□□ 2.69
SMARCD3-203ENST00000392811 KCNQ3O43525 872 aa31.82■■■□□ 2.68
SMARCD3-203ENST00000392811 SMARCA5O60264 1052 aaPredicted RBP31.82■■■□□ 2.68
SMARCD3-203ENST00000392811 C1orf141Q5JVX7 400 aa31.82■■■□□ 2.68
SMARCD3-203ENST00000392811 APBB1O00213 710 aa31.82■■■□□ 2.68
SMARCD3-203ENST00000392811 GNAI3P08754 354 aa31.82■■■□□ 2.68
SMARCD3-203ENST00000392811 TTC22Q5TAA0 569 aa31.82■■■□□ 2.68
SMARCD3-203ENST00000392811 OTUD7AQ8TE49 926 aaPredicted RBP31.82■■■□□ 2.68
SMARCD3-203ENST00000392811 BTBD11A6QL63 1104 aa31.81■■■□□ 2.68
SMARCD3-203ENST00000392811 RNMTO43148 476 aaKnown RBP31.81■■■□□ 2.68
SMARCD3-203ENST00000392811 HOXB7P09629 217 aa31.81■■■□□ 2.68
SMARCD3-203ENST00000392811 ZC3H6P61129 1189 aaKnown RBP31.81■■■□□ 2.68
SMARCD3-203ENST00000392811 DDX17Q92841 729 aaKnown RBP31.81■■■□□ 2.68
SMARCD3-203ENST00000392811 SLKQ9H2G2 1235 aaPredicted RBP31.81■■■□□ 2.68
SMARCD3-203ENST00000392811 PHAXQ9H814 394 aaKnown RBP31.81■■■□□ 2.68
SMARCD3-203ENST00000392811 CDC45O75419 566 aa31.8■■■□□ 2.68
SMARCD3-203ENST00000392811 EIF2S2P20042 333 aaKnown RBP31.8■■■□□ 2.68
SMARCD3-203ENST00000392811 NCOA3Q9Y6Q9 1424 aa31.8■■■□□ 2.68
SMARCD3-203ENST00000392811 OVOS2A0A0G2JMS6 1433 aa31.78■■■□□ 2.68
SMARCD3-203ENST00000392811 ERBB3P21860 1342 aa31.78■■■□□ 2.68
SMARCD3-203ENST00000392811 ANTXR1Q9H6X2 564 aa31.78■■■□□ 2.68
SMARCD3-203ENST00000392811 CHPF2Q9P2E5 772 aa31.75■■■□□ 2.67
SMARCD3-203ENST00000392811 FRAT2O75474 233 aaPredicted RBP31.74■■■□□ 2.67
SMARCD3-203ENST00000392811 CHMP4AQ9BY43 222 aa31.74■■■□□ 2.67
SMARCD3-203ENST00000392811 USP44Q9H0E7 712 aa31.73■■■□□ 2.67
SMARCD3-203ENST00000392811 ATP8B2P98198 1209 aa31.73■■■□□ 2.67
SMARCD3-203ENST00000392811 CADPS2Q86UW7 1296 aa31.73■■■□□ 2.67
SMARCD3-203ENST00000392811 HSPA2P54652 639 aa31.72■■■□□ 2.67
SMARCD3-203ENST00000392811 LRRFIP2Q9Y608 721 aaKnown RBP31.72■■■□□ 2.67
SMARCD3-203ENST00000392811 PNMA6EA0A0J9YXQ4 647 aa31.71■■■□□ 2.67
SMARCD3-203ENST00000392811 EXOC6BQ9Y2D4 811 aa31.71■■■□□ 2.67
SMARCD3-203ENST00000392811 NPHP3Q7Z494 1330 aa31.71■■■□□ 2.67
SMARCD3-203ENST00000392811 LMTK3Q96Q04 1460 aa31.7■■■□□ 2.66
SMARCD3-203ENST00000392811 SIPA1L3O60292 1781 aaPredicted RBP31.7■■■□□ 2.66
SMARCD3-203ENST00000392811 ADAMTS7Q9UKP4 1686 aa31.69■■■□□ 2.66
SMARCD3-203ENST00000392811 UBTFL1P0CB47 393 aaPredicted RBP31.69■■■□□ 2.66
SMARCD3-203ENST00000392811 HSCBQ8IWL3 235 aa31.69■■■□□ 2.66
SMARCD3-203ENST00000392811 KIF2CQ99661 725 aa31.69■■■□□ 2.66
SMARCD3-203ENST00000392811 SRCIN1Q9C0H9 1055 aa31.68■■■□□ 2.66
SMARCD3-203ENST00000392811 TNS3Q68CZ2 1445 aa31.68■■■□□ 2.66
SMARCD3-203ENST00000392811 COL18A1P39060 1754 aa31.68■■■□□ 2.66
SMARCD3-203ENST00000392811 SDSP20132 328 aa31.68■■■□□ 2.66
SMARCD3-203ENST00000392811 SPRYD3Q8NCJ5 442 aa31.68■■■□□ 2.66
SMARCD3-203ENST00000392811 NLRP2Q9NX02 1062 aa31.68■■■□□ 2.66
SMARCD3-203ENST00000392811 CABLES1Q8TDN4 633 aa31.66■■■□□ 2.66
SMARCD3-203ENST00000392811 HEG1Q9ULI3 1381 aa31.66■■■□□ 2.66
SMARCD3-203ENST00000392811 ANXA1P04083 346 aa31.66■■■□□ 2.66
SMARCD3-203ENST00000392811 SNX21Q969T3 373 aa31.66■■■□□ 2.66
SMARCD3-203ENST00000392811 GIGYF1O75420 1035 aaPredicted RBP31.65■■■□□ 2.66
SMARCD3-203ENST00000392811 RAPGEF4Q8WZA2 1011 aa31.65■■■□□ 2.66
SMARCD3-203ENST00000392811 OSBPL3Q9H4L5 887 aa31.65■■■□□ 2.66
SMARCD3-203ENST00000392811 CRYBG1Q9Y4K1 1723 aa31.65■■■□□ 2.66
SMARCD3-203ENST00000392811 PI4KAP2A4QPH2 592 aa31.65■■■□□ 2.66
SMARCD3-203ENST00000392811 EIF5BO60841 1220 aaKnown RBP31.65■■■□□ 2.66
SMARCD3-203ENST00000392811 PI4KAP1Q8N8J0 262 aa31.65■■■□□ 2.66
SMARCD3-203ENST00000392811 DNAAF4Q8WXU2 420 aa31.65■■■□□ 2.66
SMARCD3-203ENST00000392811 LRRCC1Q9C099 1032 aa31.64■■■□□ 2.66
SMARCD3-203ENST00000392811 IBTKQ9P2D0 1353 aaPredicted RBP31.64■■■□□ 2.66
SMARCD3-203ENST00000392811 PDE1AP54750 535 aa31.63■■■□□ 2.65
SMARCD3-203ENST00000392811 DBF4Q9UBU7 674 aaPredicted RBP31.63■■■□□ 2.65
SMARCD3-203ENST00000392811 BEND3Q5T5X7 828 aa31.63■■■□□ 2.65
SMARCD3-203ENST00000392811 ADCY9O60503 1353 aa31.61■■■□□ 2.65
SMARCD3-203ENST00000392811 SPATA31A3Q5VYP0 1347 aa31.61■■■□□ 2.65
SMARCD3-203ENST00000392811 SALL3Q9BXA9 1300 aa31.61■■■□□ 2.65
SMARCD3-203ENST00000392811 XIRP1Q702N8 1843 aaKnown RBP31.61■■■□□ 2.65
SMARCD3-203ENST00000392811 TATP17735 454 aaPredicted RBP31.6■■■□□ 2.65
SMARCD3-203ENST00000392811 SSH3Q8TE77 659 aa31.59■■■□□ 2.65
SMARCD3-203ENST00000392811 MEGF6O75095 1541 aa31.59■■■□□ 2.65
SMARCD3-203ENST00000392811 PRAMEF22A3QJZ6 481 aa31.59■■■□□ 2.65
SMARCD3-203ENST00000392811 CHRNA2Q15822 529 aa31.59■■■□□ 2.65
SMARCD3-203ENST00000392811 CSB-PGBD3P0DP91 1061 aa31.58■■■□□ 2.65
SMARCD3-203ENST00000392811 KDM6AO15550 1401 aaPredicted RBP31.58■■■□□ 2.65
SMARCD3-203ENST00000392811 PROSER3Q2NL68 480 aa31.58■■■□□ 2.65
SMARCD3-203ENST00000392811 CASC1Q6TDU7 716 aa31.58■■■□□ 2.65
SMARCD3-203ENST00000392811 ABCC6O95255 1503 aa31.57■■■□□ 2.65
SMARCD3-203ENST00000392811 SCN11AQ9UI33 1791 aa31.57■■■□□ 2.64
SMARCD3-203ENST00000392811 NBPF7P0C2Y1 421 aaPredicted RBP31.57■■■□□ 2.64
SMARCD3-203ENST00000392811 SPG7Q9UQ90 795 aa31.56■■■□□ 2.64
SMARCD3-203ENST00000392811 PHKG2P15735 406 aa31.56■■■□□ 2.64
SMARCD3-203ENST00000392811 PPP1R42Q7Z4L9 355 aa31.56■■■□□ 2.64
SMARCD3-203ENST00000392811 USP26Q9BXU7 913 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms