RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
RFC5-201ENST00000392542 NFAT5O94916 1531 aa15.17■□□□□ 0.02
RFC5-201ENST00000392542 PDE1AP54750 535 aa15.17■□□□□ 0.02
RFC5-201ENST00000392542 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
RFC5-201ENST00000392542 GZF1Q9H116 711 aaPredicted RBP15.17■□□□□ 0.02
RFC5-201ENST00000392542 NECTIN2Q92692 538 aa15.16■□□□□ 0.02
RFC5-201ENST00000392542 TUBGCP6Q96RT7 1819 aa15.16■□□□□ 0.02
RFC5-201ENST00000392542 IP6K1Q92551 441 aa15.16■□□□□ 0.02
RFC5-201ENST00000392542 PTMSP20962 102 aa15.15■□□□□ 0.02
RFC5-201ENST00000392542 ATP8B2P98198 1209 aa15.15■□□□□ 0.02
RFC5-201ENST00000392542 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
RFC5-201ENST00000392542 EXOC6BQ9Y2D4 811 aa15.15■□□□□ 0.02
RFC5-201ENST00000392542 SALL3Q9BXA9 1300 aa15.15■□□□□ 0.02
RFC5-201ENST00000392542 MED1Q15648 1581 aaPredicted RBP15.15■□□□□ 0.02
RFC5-201ENST00000392542 REC8O95072 547 aa15.15■□□□□ 0.02
RFC5-201ENST00000392542 ERC2O15083 957 aa15.14■□□□□ 0.01
RFC5-201ENST00000392542 LRRCC1Q9C099 1032 aa15.14■□□□□ 0.01
RFC5-201ENST00000392542 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
RFC5-201ENST00000392542 CEMIPQ8WUJ3 1361 aa15.14■□□□□ 0.01
RFC5-201ENST00000392542 ANKLE2Q86XL3 938 aa15.14■□□□□ 0.01
RFC5-201ENST00000392542 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
RFC5-201ENST00000392542 PNMA6EA0A0J9YXQ4 647 aa15.13■□□□□ 0.01
RFC5-201ENST00000392542 HDGFL1Q5TGJ6 251 aa15.13■□□□□ 0.01
RFC5-201ENST00000392542 PHRF1Q9P1Y6 1649 aaKnown RBP15.13■□□□□ 0.01
RFC5-201ENST00000392542 KDM3BQ7LBC6 1761 aa15.13■□□□□ 0.01
RFC5-201ENST00000392542 XRCC6P12956 609 aaKnown RBP eCLIP15.13■□□□□ 0.01
RFC5-201ENST00000392542 ADGRL3Q9HAR2 1447 aa15.12■□□□□ 0.01
RFC5-201ENST00000392542 SSFA2P28290 1259 aa15.12■□□□□ 0.01
RFC5-201ENST00000392542 SKOR2Q2VWA4 1001 aaPredicted RBP15.12■□□□□ 0.01
RFC5-201ENST00000392542 LRRFIP2Q9Y608 721 aaKnown RBP15.12■□□□□ 0.01
RFC5-201ENST00000392542 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
RFC5-201ENST00000392542 LMO7Q8WWI1 1683 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 NBPF6Q5VWK0 638 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 FAM43AQ8N2R8 423 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 NBPF4Q96M43 638 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 USP44Q9H0E7 712 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 RGPD2P0DJD1 1756 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
RFC5-201ENST00000392542 ST18O60284 1047 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 MX1P20591 662 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 KCNH5Q8NCM2 988 aa15.11■□□□□ 0.01
RFC5-201ENST00000392542 ISY1Q9ULR0 285 aaKnown RBP15.11■□□□□ 0.01
RFC5-201ENST00000392542 UBTFL1P0CB47 393 aaPredicted RBP15.1■□□□□ 0.01
RFC5-201ENST00000392542 ARXQ96QS3 562 aa15.1■□□□□ 0.01
RFC5-201ENST00000392542 PHAXQ9H814 394 aaKnown RBP15.1■□□□□ 0.01
RFC5-201ENST00000392542 HOXB7P09629 217 aa15.09■□□□□ 0.01
RFC5-201ENST00000392542 PSME1Q06323 249 aa15.09■□□□□ 0.01
RFC5-201ENST00000392542 STAP2Q9UGK3 403 aa15.09■□□□□ 0.01
RFC5-201ENST00000392542 MRE11P49959 708 aa15.09■□□□□ 0.01
RFC5-201ENST00000392542 EIF4A1P60842 406 aaKnown RBP15.09■□□□□ 0.01
RFC5-201ENST00000392542 ESCO1Q5FWF5 840 aa15.09■□□□□ 0.01
RFC5-201ENST00000392542 TSHZ3Q63HK5 1081 aa15.09■□□□□ 0.01
RFC5-201ENST00000392542 SRCIN1Q9C0H9 1055 aa15.09■□□□□ 0.01
RFC5-201ENST00000392542 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
RFC5-201ENST00000392542 NUCB2P80303 420 aa15.08■□□□□ 0.01
RFC5-201ENST00000392542 RBM33Q96EV2 1170 aaKnown RBP15.08■□□□□ 0.01
RFC5-201ENST00000392542 ESYT1Q9BSJ8 1104 aa15.08■□□□□ 0.01
RFC5-201ENST00000392542 GOLGA6L22H0YM25 854 aa15.08■□□□□ 0
RFC5-201ENST00000392542 SSH3Q8TE77 659 aa15.08■□□□□ 0
RFC5-201ENST00000392542 CHMP4AQ9BY43 222 aa15.08■□□□□ 0
RFC5-201ENST00000392542 LGR6Q9HBX8 967 aa15.08■□□□□ 0
RFC5-201ENST00000392542 AOX1Q06278 1338 aa15.08■□□□□ 0
RFC5-201ENST00000392542 BAG4O95429 457 aaKnown RBP15.07■□□□□ 0
RFC5-201ENST00000392542 CWC22Q9HCG8 908 aaKnown RBP15.07■□□□□ 0
RFC5-201ENST00000392542 CYP2E1P05181 493 aaPredicted RBP15.07■□□□□ 0
RFC5-201ENST00000392542 AKAP4Q5JQC9 854 aa15.07■□□□□ 0
RFC5-201ENST00000392542 ZBTB7CA1YPR0 619 aa15.06■□□□□ 0
RFC5-201ENST00000392542 EIF2S2P20042 333 aaKnown RBP15.06■□□□□ 0
RFC5-201ENST00000392542 SLIT3O75094 1523 aa15.06■□□□□ 0
RFC5-201ENST00000392542 NCAPD2Q15021 1401 aa15.06■□□□□ 0
RFC5-201ENST00000392542 RAB11FIP3O75154 756 aa15.06■□□□□ 0
RFC5-201ENST00000392542 PLEKHO1Q53GL0 409 aaPredicted RBP15.06■□□□□ 0
RFC5-201ENST00000392542 PANK2Q9BZ23 570 aa15.06■□□□□ 0
RFC5-201ENST00000392542 GRPEL1Q9HAV7 217 aa15.06■□□□□ 0
RFC5-201ENST00000392542 CHMLP26374 656 aa15.05■□□□□ 0
RFC5-201ENST00000392542 POLA2Q14181 598 aa15.05■□□□□ 0
RFC5-201ENST00000392542 ZNF530Q6P9A1 599 aaPredicted RBP15.05■□□□□ 0
RFC5-201ENST00000392542 TRIM6-TRIM34B2RNG4 842 aa15.05■□□□□ -0
RFC5-201ENST00000392542 MCCP23508 829 aa15.05■□□□□ -0
RFC5-201ENST00000392542 TEFQ10587 303 aa15.05■□□□□ -0
RFC5-201ENST00000392542 PPP1R42Q7Z4L9 355 aa15.05■□□□□ -0
RFC5-201ENST00000392542 RILPL2Q969X0 211 aa15.05■□□□□ -0
RFC5-201ENST00000392542 LRRC59Q96AG4 307 aaKnown RBP15.05■□□□□ -0
RFC5-201ENST00000392542 CHPF2Q9P2E5 772 aa15.05■□□□□ -0
RFC5-201ENST00000392542 KCNQ3O43525 872 aa15.04■□□□□ -0
RFC5-201ENST00000392542 DNAAF4Q8WXU2 420 aa15.04■□□□□ -0
RFC5-201ENST00000392542 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
RFC5-201ENST00000392542 AMOTQ4VCS5 1084 aa15.04■□□□□ -0
RFC5-201ENST00000392542 BEND3Q5T5X7 828 aa15.04■□□□□ -0
RFC5-201ENST00000392542 OVOS2A0A0G2JMS6 1433 aa15.03■□□□□ -0
RFC5-201ENST00000392542 BTBD11A6QL63 1104 aa15.03■□□□□ -0
RFC5-201ENST00000392542 ARHGEF25Q86VW2 580 aa15.03■□□□□ -0
RFC5-201ENST00000392542 IL1RAPL2Q9NP60 686 aa15.03■□□□□ -0
RFC5-201ENST00000392542 CAMTA1Q9Y6Y1 1673 aa15.03■□□□□ -0
RFC5-201ENST00000392542 ANAPC15P60006 121 aa15.03■□□□□ -0
RFC5-201ENST00000392542 ZGPATQ8N5A5 531 aaKnown RBP15.03■□□□□ -0
RFC5-201ENST00000392542 NPHP4O75161 1426 aaPredicted RBP15.03■□□□□ -0
RFC5-201ENST00000392542 PXDNQ92626 1479 aa15.03■□□□□ -0
RFC5-201ENST00000392542 PI4KAP2A4QPH2 592 aa15.02■□□□□ -0
RFC5-201ENST00000392542 RNMTO43148 476 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms