RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 AMOTQ4VCS5 1084 aa25.1■■□□□ 1.61
CSNK1D-203ENST00000392334 NGLY1Q96IV0 654 aa25.09■■□□□ 1.61
CSNK1D-203ENST00000392334 ZKSCAN2Q63HK3 967 aa25.08■■□□□ 1.61
CSNK1D-203ENST00000392334 AKAP4Q5JQC9 854 aa25.08■■□□□ 1.61
CSNK1D-203ENST00000392334 C1orf141Q5JVX7 400 aa25.08■■□□□ 1.61
CSNK1D-203ENST00000392334 NRAPQ86VF7 1730 aa25.07■■□□□ 1.6
CSNK1D-203ENST00000392334 SLIT2O94813 1529 aa25.07■■□□□ 1.6
CSNK1D-203ENST00000392334 TATP17735 454 aaPredicted RBP25.07■■□□□ 1.6
CSNK1D-203ENST00000392334 ALDH1L2Q3SY69 923 aa25.07■■□□□ 1.6
CSNK1D-203ENST00000392334 TRIM27P14373 513 aa25.06■■□□□ 1.6
CSNK1D-203ENST00000392334 IL27Q8NEV9 243 aa25.06■■□□□ 1.6
CSNK1D-203ENST00000392334 TAF7Q15545 349 aaPredicted RBP25.05■■□□□ 1.6
CSNK1D-203ENST00000392334 FTSJ3Q8IY81 847 aaKnown RBP25.05■■□□□ 1.6
CSNK1D-203ENST00000392334 NWD2Q9ULI1 1742 aa25.04■■□□□ 1.6
CSNK1D-203ENST00000392334 MRPL50Q8N5N7 158 aaKnown RBP25.03■■□□□ 1.6
CSNK1D-203ENST00000392334 ATF7IPQ6VMQ6 1270 aa25.03■■□□□ 1.6
CSNK1D-203ENST00000392334 DZIP1LQ8IYY4 767 aaKnown RBP25.03■■□□□ 1.6
CSNK1D-203ENST00000392334 PCDHB15Q9Y5E8 787 aa25.03■■□□□ 1.6
CSNK1D-203ENST00000392334 BECN1Q14457 450 aa25.02■■□□□ 1.6
CSNK1D-203ENST00000392334 MEX3CQ5U5Q3 659 aaKnown RBP25.02■■□□□ 1.6
CSNK1D-203ENST00000392334 ZNF428Q96B54 188 aa25.02■■□□□ 1.6
CSNK1D-203ENST00000392334 CEMIPQ8WUJ3 1361 aa25.02■■□□□ 1.6
CSNK1D-203ENST00000392334 IL2RBP14784 551 aa25.02■■□□□ 1.6
CSNK1D-203ENST00000392334 BCL9LQ86UU0 1499 aa25.01■■□□□ 1.59
CSNK1D-203ENST00000392334 TEFQ10587 303 aa25.01■■□□□ 1.59
CSNK1D-203ENST00000392334 KIF16BQ96L93 1317 aa25■■□□□ 1.59
CSNK1D-203ENST00000392334 RNMTO43148 476 aaKnown RBP25■■□□□ 1.59
CSNK1D-203ENST00000392334 SEC24BO95487 1268 aa25■■□□□ 1.59
CSNK1D-203ENST00000392334 RWDD1Q9H446 243 aaPredicted RBP25■■□□□ 1.59
CSNK1D-203ENST00000392334 FRAT2O75474 233 aaPredicted RBP25■■□□□ 1.59
CSNK1D-203ENST00000392334 UNC5CLQ8IV45 518 aa25■■□□□ 1.59
CSNK1D-203ENST00000392334 FNBP4Q8N3X1 1017 aaPredicted RBP25■■□□□ 1.59
CSNK1D-203ENST00000392334 CCDC9Q9Y3X0 531 aaKnown RBP25■■□□□ 1.59
CSNK1D-203ENST00000392334 OVOS2A0A0G2JMS6 1433 aa25■■□□□ 1.59
CSNK1D-203ENST00000392334 PARP4Q9UKK3 1724 aaKnown RBP24.99■■□□□ 1.59
CSNK1D-203ENST00000392334 NECTIN2Q92692 538 aa24.98■■□□□ 1.59
CSNK1D-203ENST00000392334 SPG7Q9UQ90 795 aa24.98■■□□□ 1.59
CSNK1D-203ENST00000392334 SPATA31A1Q5TZJ5 1347 aa24.98■■□□□ 1.59
CSNK1D-203ENST00000392334 LRRC37A3O60309 1634 aa24.98■■□□□ 1.59
CSNK1D-203ENST00000392334 IPO8O15397 1037 aaKnown RBP24.98■■□□□ 1.59
CSNK1D-203ENST00000392334 KCNQ3O43525 872 aa24.98■■□□□ 1.59
CSNK1D-203ENST00000392334 PDZRN3Q9UPQ7 1066 aa24.98■■□□□ 1.59
CSNK1D-203ENST00000392334 PKD1L3Q7Z443 1732 aa24.98■■□□□ 1.59
CSNK1D-203ENST00000392334 CYP27B1O15528 508 aa24.97■■□□□ 1.59
CSNK1D-203ENST00000392334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.97■■□□□ 1.59
CSNK1D-203ENST00000392334 USP21Q9UK80 565 aa24.97■■□□□ 1.59
CSNK1D-203ENST00000392334 MVPQ14764 893 aaKnown RBP24.96■■□□□ 1.59
CSNK1D-203ENST00000392334 ITPRIPQ8IWB1 547 aa24.96■■□□□ 1.59
CSNK1D-203ENST00000392334 BTBD11A6QL63 1104 aa24.96■■□□□ 1.59
CSNK1D-203ENST00000392334 PHKG2P15735 406 aa24.96■■□□□ 1.59
CSNK1D-203ENST00000392334 TMEM57Q8N5G2 664 aa24.96■■□□□ 1.59
CSNK1D-203ENST00000392334 ZCRB1Q8TBF4 217 aaKnown RBP24.95■■□□□ 1.58
CSNK1D-203ENST00000392334 SPATA31A5Q5VU36 1347 aa24.95■■□□□ 1.58
CSNK1D-203ENST00000392334 SPATA31A7Q8IWB4 1347 aa24.95■■□□□ 1.58
CSNK1D-203ENST00000392334 BRPF1P55201 1214 aaPredicted RBP24.95■■□□□ 1.58
CSNK1D-203ENST00000392334 TBC1D32Q96NH3 1257 aa24.95■■□□□ 1.58
CSNK1D-203ENST00000392334 FBXO41Q8TF61 875 aa24.94■■□□□ 1.58
CSNK1D-203ENST00000392334 UPF2Q9HAU5 1272 aaKnown RBP24.94■■□□□ 1.58
CSNK1D-203ENST00000392334 AFF2P51816 1311 aa24.93■■□□□ 1.58
CSNK1D-203ENST00000392334 SLC4A2P04920 1241 aa24.93■■□□□ 1.58
CSNK1D-203ENST00000392334 IFNL2Q8IZJ0 200 aa24.93■■□□□ 1.58
CSNK1D-203ENST00000392334 DDX54Q8TDD1 881 aaKnown RBP24.93■■□□□ 1.58
CSNK1D-203ENST00000392334 SHANK3Q9BYB0 1731 aa24.93■■□□□ 1.58
CSNK1D-203ENST00000392334 DISP2A7MBM2 1401 aa24.92■■□□□ 1.58
CSNK1D-203ENST00000392334 BABAM1Q9NWV8 329 aa24.91■■□□□ 1.58
CSNK1D-203ENST00000392334 VPS72Q15906 364 aa24.9■■□□□ 1.58
CSNK1D-203ENST00000392334 WNK3Q9BYP7 1800 aa24.9■■□□□ 1.58
CSNK1D-203ENST00000392334 EIF4A1P60842 406 aaKnown RBP24.9■■□□□ 1.58
CSNK1D-203ENST00000392334 PLEKHG2Q9H7P9 1386 aa24.89■■□□□ 1.58
CSNK1D-203ENST00000392334 NFATC2IPQ8NCF5 419 aa24.89■■□□□ 1.57
CSNK1D-203ENST00000392334 PCDH11XQ9BZA7 1347 aa24.89■■□□□ 1.57
CSNK1D-203ENST00000392334 PCDH11YQ9BZA8 1340 aa24.89■■□□□ 1.57
CSNK1D-203ENST00000392334 KDM6AO15550 1401 aaPredicted RBP24.89■■□□□ 1.57
CSNK1D-203ENST00000392334 ANTXR1Q9H6X2 564 aa24.88■■□□□ 1.57
CSNK1D-203ENST00000392334 THRAP3Q9Y2W1 955 aaKnown RBP24.88■■□□□ 1.57
CSNK1D-203ENST00000392334 EIF2S2P20042 333 aaKnown RBP24.88■■□□□ 1.57
CSNK1D-203ENST00000392334 FAM98CQ17RN3 349 aaKnown RBP24.88■■□□□ 1.57
CSNK1D-203ENST00000392334 G2E3Q7L622 706 aa24.88■■□□□ 1.57
CSNK1D-203ENST00000392334 ARHGAP45Q92619 1136 aa24.88■■□□□ 1.57
CSNK1D-203ENST00000392334 SLC39A6Q13433 755 aa24.87■■□□□ 1.57
CSNK1D-203ENST00000392334 HDAC1Q13547 482 aaPredicted RBP24.87■■□□□ 1.57
CSNK1D-203ENST00000392334 BRPF3Q9ULD4 1205 aa24.87■■□□□ 1.57
CSNK1D-203ENST00000392334 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.87■■□□□ 1.57
CSNK1D-203ENST00000392334 SCN11AQ9UI33 1791 aa24.87■■□□□ 1.57
CSNK1D-203ENST00000392334 SLC52A2Q9HAB3 445 aa24.86■■□□□ 1.57
CSNK1D-203ENST00000392334 DDX19BQ9UMR2 479 aa24.86■■□□□ 1.57
CSNK1D-203ENST00000392334 ADAMTS7Q9UKP4 1686 aa24.85■■□□□ 1.57
CSNK1D-203ENST00000392334 EXOC5O00471 708 aa24.85■■□□□ 1.57
CSNK1D-203ENST00000392334 DCAF5Q96JK2 942 aa24.85■■□□□ 1.57
CSNK1D-203ENST00000392334 STK31Q9BXU1 1019 aa24.85■■□□□ 1.57
CSNK1D-203ENST00000392334 HDGFL1Q5TGJ6 251 aa24.84■■□□□ 1.57
CSNK1D-203ENST00000392334 CCDC30Q5VVM6 783 aa24.84■■□□□ 1.57
CSNK1D-203ENST00000392334 BARGINQ6ZT62 677 aa24.84■■□□□ 1.57
CSNK1D-203ENST00000392334 PRAMEF22A3QJZ6 481 aa24.83■■□□□ 1.57
CSNK1D-203ENST00000392334 API5Q9BZZ5 524 aaKnown RBP24.83■■□□□ 1.57
CSNK1D-203ENST00000392334 DDB1Q16531 1140 aa24.82■■□□□ 1.56
CSNK1D-203ENST00000392334 ABCC4O15439 1325 aa24.81■■□□□ 1.56
CSNK1D-203ENST00000392334 GJD4Q96KN9 370 aaPredicted RBP24.81■■□□□ 1.56
CSNK1D-203ENST00000392334 CDCA7Q9BWT1 371 aaPredicted RBP24.81■■□□□ 1.56
CSNK1D-203ENST00000392334 TBC1D2Q9BYX2 928 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 273.1 ms