RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 IL16Q14005 1332 aa22.2■■□□□ 1.14
ERCC2-202ENST00000391942 PRIM1P49642 420 aaKnown RBP22.2■■□□□ 1.14
ERCC2-202ENST00000391942 TAF7Q15545 349 aaPredicted RBP22.2■■□□□ 1.14
ERCC2-202ENST00000391942 TSR2Q969E8 191 aaKnown RBP22.2■■□□□ 1.14
ERCC2-202ENST00000391942 IFT57Q9NWB7 429 aa22.2■■□□□ 1.14
ERCC2-202ENST00000391942 GNAI1P63096 354 aa22.19■■□□□ 1.14
ERCC2-202ENST00000391942 SLFN5Q08AF3 891 aa22.19■■□□□ 1.14
ERCC2-202ENST00000391942 CFAP44Q96MT7 982 aa22.19■■□□□ 1.14
ERCC2-202ENST00000391942 TMOD3Q9NYL9 352 aa22.19■■□□□ 1.14
ERCC2-202ENST00000391942 BTBD11A6QL63 1104 aa22.18■■□□□ 1.14
ERCC2-202ENST00000391942 E9PSI1 815 aa22.18■■□□□ 1.14
ERCC2-202ENST00000391942 TSPYL4Q9UJ04 414 aa22.18■■□□□ 1.14
ERCC2-202ENST00000391942 ZNF853P0CG23 659 aa22.17■■□□□ 1.14
ERCC2-202ENST00000391942 MBIPQ9NS73 344 aa22.17■■□□□ 1.14
ERCC2-202ENST00000391942 CHL1O00533 1208 aa22.16■■□□□ 1.14
ERCC2-202ENST00000391942 KCNQ2O43526 872 aa22.16■■□□□ 1.14
ERCC2-202ENST00000391942 MYH16Q9H6N6 1097 aa22.16■■□□□ 1.14
ERCC2-202ENST00000391942 FANCIQ9NVI1 1328 aa22.16■■□□□ 1.14
ERCC2-202ENST00000391942 SLC39A6Q13433 755 aa22.15■■□□□ 1.14
ERCC2-202ENST00000391942 PIGBQ92521 554 aa22.15■■□□□ 1.14
ERCC2-202ENST00000391942 SBF2Q86WG5 1849 aa22.14■■□□□ 1.13
ERCC2-202ENST00000391942 KCNQ3O43525 872 aa22.14■■□□□ 1.13
ERCC2-202ENST00000391942 DUSP27Q5VZP5 1158 aa22.14■■□□□ 1.13
ERCC2-202ENST00000391942 FAM196AQ6ZSG2 479 aa22.14■■□□□ 1.13
ERCC2-202ENST00000391942 PTF1AQ7RTS3 328 aa22.14■■□□□ 1.13
ERCC2-202ENST00000391942 KDM3BQ7LBC6 1761 aa22.14■■□□□ 1.13
ERCC2-202ENST00000391942 BCL9O00512 1426 aa22.14■■□□□ 1.13
ERCC2-202ENST00000391942 NHSQ6T4R5 1651 aa22.13■■□□□ 1.13
ERCC2-202ENST00000391942 TRMT2AQ8IZ69 625 aaKnown RBP22.12■■□□□ 1.13
ERCC2-202ENST00000391942 BABAM1Q9NWV8 329 aa22.1■■□□□ 1.13
ERCC2-202ENST00000391942 ASAP1Q9ULH1 1129 aa22.1■■□□□ 1.13
ERCC2-202ENST00000391942 PAPPAQ13219 1627 aa22.1■■□□□ 1.13
ERCC2-202ENST00000391942 KRT24Q2M2I5 525 aa22.09■■□□□ 1.13
ERCC2-202ENST00000391942 ZNF790Q6PG37 636 aa22.09■■□□□ 1.13
ERCC2-202ENST00000391942 TTC5Q8N0Z6 440 aa22.09■■□□□ 1.13
ERCC2-202ENST00000391942 TRIM37O94972 964 aa22.09■■□□□ 1.13
ERCC2-202ENST00000391942 EXOSC9Q06265 439 aaKnown RBP22.09■■□□□ 1.13
ERCC2-202ENST00000391942 BTAF1O14981 1849 aa22.08■■□□□ 1.12
ERCC2-202ENST00000391942 ATG3Q9NT62 314 aa22.08■■□□□ 1.12
ERCC2-202ENST00000391942 ELL2O00472 640 aaPredicted RBP22.07■■□□□ 1.12
ERCC2-202ENST00000391942 PTCD1O75127 700 aaKnown RBP22.06■■□□□ 1.12
ERCC2-202ENST00000391942 EIF4A1P60842 406 aaKnown RBP22.06■■□□□ 1.12
ERCC2-202ENST00000391942 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
ERCC2-202ENST00000391942 TSPYL6Q8N831 410 aa22.05■■□□□ 1.12
ERCC2-202ENST00000391942 ZNF496Q96IT1 587 aaPredicted RBP22.05■■□□□ 1.12
ERCC2-202ENST00000391942 BCL11BQ9C0K0 894 aaPredicted RBP22.05■■□□□ 1.12
ERCC2-202ENST00000391942 UBR2Q8IWV8 1755 aa22.05■■□□□ 1.12
ERCC2-202ENST00000391942 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
ERCC2-202ENST00000391942 EP400Q96L91 3159 aa22.04■■□□□ 1.12
ERCC2-202ENST00000391942 RBM42Q9BTD8 480 aaKnown RBP22.03■■□□□ 1.12
ERCC2-202ENST00000391942 FMNL2Q96PY5 1086 aa22.03■■□□□ 1.12
ERCC2-202ENST00000391942 PALLDQ8WX93 1383 aa22.02■■□□□ 1.12
ERCC2-202ENST00000391942 PRAMEF22A3QJZ6 481 aa22.01■■□□□ 1.11
ERCC2-202ENST00000391942 TWISTNBQ3B726 338 aaPredicted RBP22.01■■□□□ 1.11
ERCC2-202ENST00000391942 C5P01031 1676 aa22■■□□□ 1.11
ERCC2-202ENST00000391942 SMARCC1Q92922 1105 aaPredicted RBP22■■□□□ 1.11
ERCC2-202ENST00000391942 CENPBP07199 599 aaPredicted RBP21.99■■□□□ 1.11
ERCC2-202ENST00000391942 HEG1Q9ULI3 1381 aa21.99■■□□□ 1.11
ERCC2-202ENST00000391942 GIGYF1O75420 1035 aaPredicted RBP21.98■■□□□ 1.11
ERCC2-202ENST00000391942 NECTIN2Q92692 538 aa21.98■■□□□ 1.11
ERCC2-202ENST00000391942 VAMP4O75379 141 aa21.97■■□□□ 1.11
ERCC2-202ENST00000391942 SLC4A9Q96Q91 983 aa21.97■■□□□ 1.11
ERCC2-202ENST00000391942 TNS1Q9HBL0 1735 aaKnown RBP21.97■■□□□ 1.11
ERCC2-202ENST00000391942 TCERG1O14776 1098 aaKnown RBP21.96■■□□□ 1.11
ERCC2-202ENST00000391942 APBA3O96018 575 aa21.96■■□□□ 1.11
ERCC2-202ENST00000391942 SNRPA1P09661 255 aaKnown RBP21.96■■□□□ 1.11
ERCC2-202ENST00000391942 LOC102724428A0A0B4J2F2 783 aa21.96■■□□□ 1.11
ERCC2-202ENST00000391942 EIF2S2P20042 333 aaKnown RBP21.96■■□□□ 1.11
ERCC2-202ENST00000391942 KCNQ4P56696 695 aa21.96■■□□□ 1.11
ERCC2-202ENST00000391942 SIK1P57059 783 aa21.96■■□□□ 1.11
ERCC2-202ENST00000391942 ATP6V1AP38606 617 aa21.94■■□□□ 1.1
ERCC2-202ENST00000391942 DNAJC10Q8IXB1 793 aa21.94■■□□□ 1.1
ERCC2-202ENST00000391942 USP16Q9Y5T5 823 aa21.94■■□□□ 1.1
ERCC2-202ENST00000391942 LY75O60449 1722 aa21.93■■□□□ 1.1
ERCC2-202ENST00000391942 TJP1Q07157 1748 aa21.93■■□□□ 1.1
ERCC2-202ENST00000391942 HDGFL1Q5TGJ6 251 aa21.93■■□□□ 1.1
ERCC2-202ENST00000391942 BCL2L13Q9BXK5 485 aa21.93■■□□□ 1.1
ERCC2-202ENST00000391942 LAMB4A4D0S4 1761 aa21.92■■□□□ 1.1
ERCC2-202ENST00000391942 HOXB7P09629 217 aa21.92■■□□□ 1.1
ERCC2-202ENST00000391942 CT47B1P0C2W7 299 aaPredicted RBP21.92■■□□□ 1.1
ERCC2-202ENST00000391942 VSIG10Q8N0Z9 540 aa21.92■■□□□ 1.1
ERCC2-202ENST00000391942 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
ERCC2-202ENST00000391942 ITPK1Q13572 414 aa21.91■■□□□ 1.1
ERCC2-202ENST00000391942 CCNL1Q9UK58 526 aaPredicted RBP21.91■■□□□ 1.1
ERCC2-202ENST00000391942 SOS1Q07889 1333 aaPredicted RBP21.9■■□□□ 1.1
ERCC2-202ENST00000391942 RARSP54136 660 aaKnown RBP21.9■■□□□ 1.1
ERCC2-202ENST00000391942 SSH1Q8WYL5 1049 aa21.9■■□□□ 1.1
ERCC2-202ENST00000391942 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
ERCC2-202ENST00000391942 SF3B2Q13435 895 aaKnown RBP21.89■■□□□ 1.09
ERCC2-202ENST00000391942 CCDC30Q5VVM6 783 aa21.89■■□□□ 1.09
ERCC2-202ENST00000391942 BCAR3O75815 825 aa21.88■■□□□ 1.09
ERCC2-202ENST00000391942 ILDR2Q71H61 639 aa21.88■■□□□ 1.09
ERCC2-202ENST00000391942 TEX13AQ9BXU3 409 aaPredicted RBP21.88■■□□□ 1.09
ERCC2-202ENST00000391942 SMC4Q9NTJ3 1288 aa21.88■■□□□ 1.09
ERCC2-202ENST00000391942 CHPF2Q9P2E5 772 aa21.88■■□□□ 1.09
ERCC2-202ENST00000391942 ZNF831Q5JPB2 1677 aa21.87■■□□□ 1.09
ERCC2-202ENST00000391942 PLSCR1O15162 318 aa21.87■■□□□ 1.09
ERCC2-202ENST00000391942 ANXA1P04083 346 aa21.87■■□□□ 1.09
ERCC2-202ENST00000391942 A1BGP04217 495 aa21.87■■□□□ 1.09
ERCC2-202ENST00000391942 CICQ96RK0 1608 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms