RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 OGFOD1Q8N543 542 aa7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 BACH1O14867 736 aa7.49□□□□□ -1.21
SNORA40.3-201ENST00000390964 GTF2E1P29083 439 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.3-201ENST00000390964 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.3-201ENST00000390964 SMTNP53814 917 aa7.49□□□□□ -1.21
SNORA40.3-201ENST00000390964 TLR1Q15399 786 aa7.49□□□□□ -1.21
SNORA40.3-201ENST00000390964 CFAP70Q5T0N1 1121 aa7.49□□□□□ -1.21
SNORA40.3-201ENST00000390964 CCDC155Q8N6L0 562 aa7.49□□□□□ -1.21
SNORA40.3-201ENST00000390964 DNAAF2Q9NVR5 837 aaKnown RBP7.49□□□□□ -1.21
SNORA40.3-201ENST00000390964 SENP3-EIF4A1A0A087X0R7 540 aa7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 POU4F2Q12837 409 aa7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 MTFR1Q15390 333 aa7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 KANK4Q5T7N3 995 aaPredicted RBP7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 CCDC102BQ68D86 513 aa7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 TMEM214Q6NUQ4 689 aaKnown RBP7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 NBPF10Q6P3W6 841 aaKnown RBP7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 TAS1R3Q7RTX0 852 aa7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 PPARGC1BQ86YN6 1023 aaKnown RBP7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 NBPF15Q8N660 670 aa7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 VRTNQ9H8Y1 702 aa7.48□□□□□ -1.21
SNORA40.3-201ENST00000390964 RHOQP17081 205 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 RASA1P20936 1047 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 GNASQ5JWF2 1037 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 SIX5Q8N196 739 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 TPCN2Q8NHX9 752 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 RHBDD1Q8TEB9 315 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 ZNF358Q9NW07 568 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 SERPINA10Q9UK55 444 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 KIAA1024Q9UPX6 916 aa7.47□□□□□ -1.21
SNORA40.3-201ENST00000390964 A6NJY4 79 aa7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 M0R2N6 131 aa7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 VSIG8P0DPA2 414 aa7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 VEGFBP49765 207 aa7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 LARP1Q6PKG0 1096 aaKnown RBP7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 IRF7Q92985 503 aa7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 CCDC97Q96F63 343 aaPredicted RBP7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 SERTAD1Q9UHV2 236 aa7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 DYRK1BQ9Y463 629 aa7.46□□□□□ -1.22
SNORA40.3-201ENST00000390964 ARID3CA6NKF2 412 aa7.45□□□□□ -1.22
SNORA40.3-201ENST00000390964 FAM196BA6NMK8 535 aa7.45□□□□□ -1.22
SNORA40.3-201ENST00000390964 CDK2AP1O14519 115 aa7.45□□□□□ -1.22
SNORA40.3-201ENST00000390964 DKK1O94907 266 aa7.45□□□□□ -1.22
SNORA40.3-201ENST00000390964 ITGA6P23229 1130 aa7.45□□□□□ -1.22
SNORA40.3-201ENST00000390964 NANOS1Q8WY41 292 aaKnown RBP7.45□□□□□ -1.22
SNORA40.3-201ENST00000390964 TIMMDC1Q9NPL8 285 aa7.45□□□□□ -1.22
SNORA40.3-201ENST00000390964 RBM19Q9Y4C8 960 aaKnown RBP7.45□□□□□ -1.22
SNORA40.3-201ENST00000390964 PTK7Q13308 1070 aa7.44□□□□□ -1.22
SNORA40.3-201ENST00000390964 C4orf17Q53FE4 359 aa7.44□□□□□ -1.22
SNORA40.3-201ENST00000390964 ZNF594Q96JF6 807 aaPredicted RBP7.44□□□□□ -1.22
SNORA40.3-201ENST00000390964 IQSEC3Q9UPP2 1182 aaPredicted RBP7.44□□□□□ -1.22
SNORA40.3-201ENST00000390964 RFX1P22670 979 aa7.43□□□□□ -1.22
SNORA40.3-201ENST00000390964 EPHA4P54764 986 aa7.43□□□□□ -1.22
SNORA40.3-201ENST00000390964 SEC13P55735 322 aa7.43□□□□□ -1.22
SNORA40.3-201ENST00000390964 CRTC2Q53ET0 693 aaPredicted RBP7.43□□□□□ -1.22
SNORA40.3-201ENST00000390964 GMCL1Q96IK5 515 aa7.43□□□□□ -1.22
SNORA40.3-201ENST00000390964 NIFKQ9BYG3 293 aaKnown RBP7.43□□□□□ -1.22
SNORA40.3-201ENST00000390964 SCHIP1Q9P0W5 487 aaPredicted RBP7.43□□□□□ -1.22
SNORA40.3-201ENST00000390964 A0A1B0GTH6 734 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L15C9J2P7 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L10C9JJH3 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L13C9JLJ4 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L12C9JPN9 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L11C9JVI0 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L21D6R901 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L18D6R9N7 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L22D6RA61 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L17D6RBQ6 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L19D6RCP7 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L20D6RJB6 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 FOXK2Q01167 660 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP17L24Q0WX57 530 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 ZNF295-AS1Q8N0V1 137 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 ERBB4Q15303 1308 aa7.42□□□□□ -1.22
SNORA40.3-201ENST00000390964 H7C1W4 665 aa7.41□□□□□ -1.22
SNORA40.3-201ENST00000390964 F11P03951 625 aa7.41□□□□□ -1.22
SNORA40.3-201ENST00000390964 PHKA2P46019 1235 aa7.41□□□□□ -1.22
SNORA40.3-201ENST00000390964 SRPK2P78362 688 aaKnown RBP7.41□□□□□ -1.22
SNORA40.3-201ENST00000390964 ANKMY2Q8IV38 441 aa7.41□□□□□ -1.22
SNORA40.3-201ENST00000390964 TNS4Q8IZW8 715 aa7.41□□□□□ -1.22
SNORA40.3-201ENST00000390964 GAS2L1Q99501 681 aaPredicted RBP7.41□□□□□ -1.22
SNORA40.3-201ENST00000390964 SFI1A8K8P3 1242 aa7.4□□□□□ -1.22
SNORA40.3-201ENST00000390964 DPYDQ12882 1025 aa7.4□□□□□ -1.22
SNORA40.3-201ENST00000390964 SV2AQ7L0J3 742 aa7.4□□□□□ -1.22
SNORA40.3-201ENST00000390964 TRIM22Q8IYM9 498 aa7.4□□□□□ -1.22
SNORA40.3-201ENST00000390964 C1orf115Q9H7X2 142 aa7.4□□□□□ -1.22
SNORA40.3-201ENST00000390964 TIMELESSQ9UNS1 1208 aa7.4□□□□□ -1.22
SNORA40.3-201ENST00000390964 USP3Q9Y6I4 520 aa7.4□□□□□ -1.22
SNORA40.3-201ENST00000390964 PLA2G4AP47712 749 aa7.39□□□□□ -1.23
SNORA40.3-201ENST00000390964 ELOAQ14241 798 aaKnown RBP7.39□□□□□ -1.23
SNORA40.3-201ENST00000390964 RIPOR1Q6ZS17 1223 aa7.39□□□□□ -1.23
SNORA40.3-201ENST00000390964 CCDC82Q8N4S0 544 aa7.39□□□□□ -1.23
SNORA40.3-201ENST00000390964 C1orf216Q8TAB5 229 aa7.39□□□□□ -1.23
SNORA40.3-201ENST00000390964 ARXQ96QS3 562 aa7.39□□□□□ -1.23
SNORA40.3-201ENST00000390964 CUEDC1Q9NWM3 386 aaPredicted RBP7.39□□□□□ -1.23
SNORA40.3-201ENST00000390964 CABP1Q9NZU7 370 aa7.39□□□□□ -1.23
SNORA40.3-201ENST00000390964 CDC14CA4D256 554 aa7.38□□□□□ -1.23
SNORA40.3-201ENST00000390964 LBRQ14739 615 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms