RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 CCDC89Q8N998 374 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 TEX19Q8NA77 164 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 TMEM87AQ8NBN3 555 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 CLP1Q92989 425 aaKnown RBP4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 TSR2Q969E8 191 aaKnown RBP4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 RNF34Q969K3 372 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 GJD4Q96KN9 370 aaPredicted RBP4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 RNPC3Q96LT9 517 aaKnown RBP4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 SEZ6LQ9BYH1 1024 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 LRRC27Q9C0I9 530 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 CHST12Q9NRB3 414 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 ENAMQ9NRM1 1142 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 POLG2Q9UHN1 485 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 ACAD8Q9UKU7 415 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 NDUFB9Q9Y6M9 179 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 CCDC61Q9Y6R9 512 aa4.21□□□□□ -1.74
TRAJ17-201ENST00000390520 K7ELQ4 463 aaPredicted RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 RNASEH2AO75792 299 aaKnown RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 MTA2O94776 668 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 BPNT1O95861 308 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 KRT18P05783 430 aaKnown RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 TRAPPC10P48553 1259 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 MDM2Q00987 491 aaPredicted RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 FAM69CQ0P6D2 419 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 HLTFQ14527 1009 aaKnown RBP eCLIP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 LONRF1Q17RB8 773 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 TUSC1Q2TAM9 212 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 INO80DQ53TQ3 878 aaPredicted RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 CCDC93Q567U6 631 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 LARP1BQ659C4 914 aaKnown RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 TAS1R3Q7RTX0 852 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 PAF1Q8N7H5 531 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 PRR7Q8TB68 274 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 ALDH8A1Q9H2A2 487 aaPredicted RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 FAM217BQ9NTX9 383 aaPredicted RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 LIMD1Q9UGP4 676 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 EGFL7Q9UHF1 273 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 ASAP1Q9ULH1 1129 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 ODF2LQ9ULJ1 636 aa4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 NOVA2Q9UNW9 492 aaKnown RBP4.2□□□□□ -1.74
TRAJ17-201ENST00000390520 PPP1R3GB7ZBB8 358 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 SMAPO00193 183 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 HMMRO75330 724 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 IGHDP01880 384 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 MYL1P05976 194 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 SOX11P35716 441 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 SSR1P43307 286 aaKnown RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 CLK1P49759 484 aaKnown RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 EXOSC10Q01780 885 aaKnown RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 VAC14Q08AM6 782 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 CBLBQ13191 982 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 PSMD2Q13200 908 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 SERINC3Q13530 473 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 BRD3Q15059 726 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 ZKSCAN8Q15776 578 aaPredicted RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 NFE2Q16621 373 aaPredicted RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 KANK3Q6NY19 840 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 PDXDC1Q6P996 788 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 TBC1D9Q6ZT07 1266 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 ANKRD13DQ6ZTN6 518 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 MCF2L2Q86YR7 1114 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 ZSCAN29Q8IWY8 852 aaPredicted RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 RAVER1Q8IY67 606 aaKnown RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 ZNF513Q8N8E2 541 aaPredicted RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 VPS37AQ8NEZ2 397 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 C1orf216Q8TAB5 229 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 FRS2Q8WU20 508 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 GOLGA1Q92805 767 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 AKT1S1Q96B36 256 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 ERP27Q96DN0 273 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 ZNF830Q96NB3 372 aaPredicted RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 FMNL2Q96PY5 1086 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 AS3MTQ9HBK9 375 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 LGR6Q9HBX8 967 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 EMILIN3Q9NT22 766 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 CLIC5Q9NZA1 410 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 DCTN4Q9UJW0 460 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 SLC45A1Q9Y2W3 748 aa4.19□□□□□ -1.74
TRAJ17-201ENST00000390520 NPHP1O15259 732 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 TSPAN6O43657 245 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 ATP9BO43861 1147 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 VAMP4O75379 141 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 NR1I2O75469 434 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 FGRP09769 529 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 RBP3P10745 1247 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 NDUFV2P19404 249 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 OSBPP22059 807 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 MAPK1P28482 360 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 CDC27P30260 824 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 ATICP31939 592 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 PDE6BP35913 854 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 DIXDC1Q155Q3 683 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 ECM1Q16610 540 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 ACBD5Q5T8D3 534 aaPredicted RBP4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 USP48Q86UV5 1035 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 ANKRD13BQ86YJ7 626 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 LMNTD2Q8IXW0 634 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 RASEFQ8IZ41 740 aa4.18□□□□□ -1.74
TRAJ17-201ENST00000390520 IFNL3Q8IZI9 196 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms