RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 MEGF6O75095 1541 aa9.54□□□□□ -0.88
TRAV13-1-201ENST00000390436 CCDC7Q96M83 1385 aa9.53□□□□□ -0.88
TRAV13-1-201ENST00000390436 MAP3K5Q99683 1374 aa9.53□□□□□ -0.88
TRAV13-1-201ENST00000390436 TTC21AQ8NDW8 1320 aa9.53□□□□□ -0.88
TRAV13-1-201ENST00000390436 A0A1W2PP64 1363 aa9.52□□□□□ -0.88
TRAV13-1-201ENST00000390436 TTLL13PA6NNM8 815 aa9.52□□□□□ -0.89
TRAV13-1-201ENST00000390436 IL2RBP14784 551 aa9.52□□□□□ -0.89
TRAV13-1-201ENST00000390436 NEUROD1Q13562 356 aa9.52□□□□□ -0.89
TRAV13-1-201ENST00000390436 LTV1Q96GA3 475 aaPredicted RBP9.52□□□□□ -0.89
TRAV13-1-201ENST00000390436 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
TRAV13-1-201ENST00000390436 BMP2KQ9NSY1 1161 aaPredicted RBP9.52□□□□□ -0.89
TRAV13-1-201ENST00000390436 C5P01031 1676 aa9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 ROCK2O75116 1388 aaKnown RBP9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 C11orf95C9JLR9 678 aaPredicted RBP9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 COL23A1Q86Y22 540 aaPredicted RBP9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 KCNH5Q8NCM2 988 aa9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 FBXO22Q8NEZ5 403 aa9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 DDX54Q8TDD1 881 aaKnown RBP9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 MAP2P11137 1827 aaKnown RBP9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 UBR3Q6ZT12 1888 aa9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
TRAV13-1-201ENST00000390436 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
TRAV13-1-201ENST00000390436 MAP3K19Q56UN5 1328 aa9.5□□□□□ -0.89
TRAV13-1-201ENST00000390436 WWC3Q9ULE0 1092 aa9.49□□□□□ -0.89
TRAV13-1-201ENST00000390436 GABBR2O75899 941 aa9.48□□□□□ -0.89
TRAV13-1-201ENST00000390436 GPR162Q16538 588 aa9.48□□□□□ -0.89
TRAV13-1-201ENST00000390436 NBPF6Q5VWK0 638 aa9.48□□□□□ -0.89
TRAV13-1-201ENST00000390436 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
TRAV13-1-201ENST00000390436 IP6K1Q92551 441 aa9.48□□□□□ -0.89
TRAV13-1-201ENST00000390436 NBPF4Q96M43 638 aa9.48□□□□□ -0.89
TRAV13-1-201ENST00000390436 TESK2Q96S53 571 aa9.48□□□□□ -0.89
TRAV13-1-201ENST00000390436 EDC4Q6P2E9 1401 aaKnown RBP9.48□□□□□ -0.89
TRAV13-1-201ENST00000390436 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
TRAV13-1-201ENST00000390436 TMC1Q8TDI8 760 aa9.47□□□□□ -0.89
TRAV13-1-201ENST00000390436 N4BP2Q86UW6 1770 aaPredicted RBP9.46□□□□□ -0.9
TRAV13-1-201ENST00000390436 HOXC9P31274 260 aa9.46□□□□□ -0.9
TRAV13-1-201ENST00000390436 RRS1Q15050 365 aaKnown RBP9.46□□□□□ -0.9
TRAV13-1-201ENST00000390436 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.9
TRAV13-1-201ENST00000390436 ATP10DQ9P241 1426 aa9.46□□□□□ -0.9
TRAV13-1-201ENST00000390436 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
TRAV13-1-201ENST00000390436 SYTL4Q96C24 671 aaPredicted RBP9.45□□□□□ -0.9
TRAV13-1-201ENST00000390436 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
TRAV13-1-201ENST00000390436 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
TRAV13-1-201ENST00000390436 ATN1P54259 1190 aaPredicted RBP9.44□□□□□ -0.9
TRAV13-1-201ENST00000390436 MKRN3Q13064 507 aaKnown RBP9.44□□□□□ -0.9
TRAV13-1-201ENST00000390436 TFCP2L1Q9NZI6 479 aa9.44□□□□□ -0.9
TRAV13-1-201ENST00000390436 ADCY9O60503 1353 aa9.44□□□□□ -0.9
TRAV13-1-201ENST00000390436 PKD1L3Q7Z443 1732 aa9.44□□□□□ -0.9
TRAV13-1-201ENST00000390436 KIF20BQ96Q89 1820 aa9.44□□□□□ -0.9
TRAV13-1-201ENST00000390436 MYH14Q7Z406 1995 aaKnown RBP9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 CYP27B1O15528 508 aa9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 ATMINO43313 823 aaPredicted RBP9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 PPP1R37O75864 691 aa9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 SLC27A3Q5K4L6 730 aa9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 ASTLQ6HA08 431 aaPredicted RBP9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 ZCRB1Q8TBF4 217 aaKnown RBP9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 CARD11Q9BXL7 1154 aa9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 CCNL1Q9UK58 526 aaPredicted RBP9.43□□□□□ -0.9
TRAV13-1-201ENST00000390436 FYB1O15117 783 aa9.42□□□□□ -0.9
TRAV13-1-201ENST00000390436 GIGYF1O75420 1035 aaPredicted RBP9.42□□□□□ -0.9
TRAV13-1-201ENST00000390436 HSP90AB2PQ58FF8 381 aa9.42□□□□□ -0.9
TRAV13-1-201ENST00000390436 SLC16A10Q8TF71 515 aa9.42□□□□□ -0.9
TRAV13-1-201ENST00000390436 GGNBP2Q9H3C7 697 aa9.42□□□□□ -0.9
TRAV13-1-201ENST00000390436 BRCA1P38398 1863 aaKnown RBP9.42□□□□□ -0.9
TRAV13-1-201ENST00000390436 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
TRAV13-1-201ENST00000390436 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
TRAV13-1-201ENST00000390436 ZNF526Q8TF50 670 aaPredicted RBP9.41□□□□□ -0.9
TRAV13-1-201ENST00000390436 ANKRD26Q9UPS8 1709 aa9.4□□□□□ -0.9
TRAV13-1-201ENST00000390436 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
TRAV13-1-201ENST00000390436 KIF3CO14782 793 aa9.39□□□□□ -0.91
TRAV13-1-201ENST00000390436 ITPK1Q13572 414 aa9.39□□□□□ -0.91
TRAV13-1-201ENST00000390436 HDGFL2Q7Z4V5 671 aaPredicted RBP9.39□□□□□ -0.91
TRAV13-1-201ENST00000390436 LINC00116Q8NCU8 138 aa9.39□□□□□ -0.91
TRAV13-1-201ENST00000390436 SLC4A9Q96Q91 983 aa9.39□□□□□ -0.91
TRAV13-1-201ENST00000390436 EMILIN1Q9Y6C2 1016 aa9.39□□□□□ -0.91
TRAV13-1-201ENST00000390436 PALLDQ8WX93 1383 aa9.38□□□□□ -0.91
TRAV13-1-201ENST00000390436 POLD1P28340 1107 aa9.38□□□□□ -0.91
TRAV13-1-201ENST00000390436 AMPHP49418 695 aa9.38□□□□□ -0.91
TRAV13-1-201ENST00000390436 PIGBQ92521 554 aa9.38□□□□□ -0.91
TRAV13-1-201ENST00000390436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAV13-1-201ENST00000390436 C4AP0C0L4 1744 aa9.38□□□□□ -0.91
TRAV13-1-201ENST00000390436 NCAPD2Q15021 1401 aa9.38□□□□□ -0.91
TRAV13-1-201ENST00000390436 COL5A3P25940 1745 aaPredicted RBP9.37□□□□□ -0.91
TRAV13-1-201ENST00000390436 SBF1O95248 1867 aa9.37□□□□□ -0.91
TRAV13-1-201ENST00000390436 PHF14O94880 888 aa9.37□□□□□ -0.91
TRAV13-1-201ENST00000390436 MPRIPQ6WCQ1 1025 aa9.37□□□□□ -0.91
TRAV13-1-201ENST00000390436 TERF2IPQ9NYB0 399 aa9.37□□□□□ -0.91
TRAV13-1-201ENST00000390436 CICQ96RK0 1608 aaPredicted RBP9.37□□□□□ -0.91
TRAV13-1-201ENST00000390436 USP47Q96K76 1375 aa9.37□□□□□ -0.91
TRAV13-1-201ENST00000390436 IGSF1Q8N6C5 1336 aa9.36□□□□□ -0.91
TRAV13-1-201ENST00000390436 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
TRAV13-1-201ENST00000390436 HTRA3P83110 453 aa9.36□□□□□ -0.91
TRAV13-1-201ENST00000390436 SP7Q8TDD2 431 aaPredicted RBP9.36□□□□□ -0.91
TRAV13-1-201ENST00000390436 COG3Q96JB2 828 aa9.36□□□□□ -0.91
TRAV13-1-201ENST00000390436 ASAP1Q9ULH1 1129 aa9.36□□□□□ -0.91
TRAV13-1-201ENST00000390436 PXDNLA1KZ92 1463 aa9.35□□□□□ -0.91
TRAV13-1-201ENST00000390436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms