RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 NUTM1Q86Y26 1132 aa17.49■□□□□ 0.39
LRRK1-201ENST00000388948 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
LRRK1-201ENST00000388948 LARP1BQ659C4 914 aaKnown RBP17.49■□□□□ 0.39
LRRK1-201ENST00000388948 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
LRRK1-201ENST00000388948 KRT32Q14532 448 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
LRRK1-201ENST00000388948 NBPF8Q3BBV2 869 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 NBPF14Q5TI25 921 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 AEBP1Q8IUX7 1158 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 KIAA0586Q9BVV6 1533 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 LETM1O95202 739 aaPredicted RBP17.48■□□□□ 0.39
LRRK1-201ENST00000388948 HSP90B2PQ58FF3 399 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 GSE1Q14687 1217 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 ARGLU1Q9NWB6 273 aaPredicted RBP17.48■□□□□ 0.39
LRRK1-201ENST00000388948 CCDC141Q6ZP82 1450 aa17.48■□□□□ 0.39
LRRK1-201ENST00000388948 IDI1Q13907 227 aa17.47■□□□□ 0.39
LRRK1-201ENST00000388948 MAGI1Q96QZ7 1491 aaPredicted RBP17.47■□□□□ 0.39
LRRK1-201ENST00000388948 SSR1P43307 286 aaKnown RBP17.47■□□□□ 0.39
LRRK1-201ENST00000388948 TEX35Q5T0J7 233 aa17.47■□□□□ 0.39
LRRK1-201ENST00000388948 A0A087WZG4 1122 aa17.47■□□□□ 0.39
LRRK1-201ENST00000388948 EXOC6BQ9Y2D4 811 aa17.47■□□□□ 0.39
LRRK1-201ENST00000388948 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
LRRK1-201ENST00000388948 PDRG1Q9NUG6 133 aa17.47■□□□□ 0.39
LRRK1-201ENST00000388948 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
LRRK1-201ENST00000388948 PPFIBP1Q86W92 1011 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 IQCA1Q86XH1 822 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 CABP5Q9NP86 173 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 DENND4BO75064 1496 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-201ENST00000388948 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 CCDC181Q5TID7 509 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 BOLA2Q9H3K6 86 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 CTCFLQ8NI51 663 aaPredicted RBP17.46■□□□□ 0.39
LRRK1-201ENST00000388948 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 DRC1Q96MC2 740 aa17.46■□□□□ 0.39
LRRK1-201ENST00000388948 IQGAP2Q13576 1575 aa17.46■□□□□ 0.38
LRRK1-201ENST00000388948 VTI1AQ96AJ9 217 aa17.45■□□□□ 0.38
LRRK1-201ENST00000388948 CA8P35219 290 aa17.45■□□□□ 0.38
LRRK1-201ENST00000388948 KIF14Q15058 1648 aa17.45■□□□□ 0.38
LRRK1-201ENST00000388948 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
LRRK1-201ENST00000388948 EHMT1Q9H9B1 1298 aa17.45■□□□□ 0.38
LRRK1-201ENST00000388948 ANKRD62A6NC57 917 aa17.45■□□□□ 0.38
LRRK1-201ENST00000388948 PRPF40AO75400 957 aaKnown RBP17.44■□□□□ 0.38
LRRK1-201ENST00000388948 ERLIN2O94905 339 aa17.44■□□□□ 0.38
LRRK1-201ENST00000388948 TRMT1LQ7Z2T5 733 aaKnown RBP17.44■□□□□ 0.38
LRRK1-201ENST00000388948 MVPQ14764 893 aaKnown RBP17.44■□□□□ 0.38
LRRK1-201ENST00000388948 SEPT7Q16181 437 aaKnown RBP17.44■□□□□ 0.38
LRRK1-201ENST00000388948 CAVIN1Q6NZI2 390 aaKnown RBP17.44■□□□□ 0.38
LRRK1-201ENST00000388948 POTEJP0CG39 1038 aa17.44■□□□□ 0.38
LRRK1-201ENST00000388948 ANKRD24Q8TF21 1146 aa17.44■□□□□ 0.38
LRRK1-201ENST00000388948 NAIPQ13075 1403 aa17.44■□□□□ 0.38
LRRK1-201ENST00000388948 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
LRRK1-201ENST00000388948 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
LRRK1-201ENST00000388948 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
LRRK1-201ENST00000388948 KRT85P78386 507 aa17.43■□□□□ 0.38
LRRK1-201ENST00000388948 DHX8Q14562 1220 aaKnown RBP17.43■□□□□ 0.38
LRRK1-201ENST00000388948 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
LRRK1-201ENST00000388948 OGFOD1Q8N543 542 aa17.43■□□□□ 0.38
LRRK1-201ENST00000388948 BAG3O95817 575 aa17.43■□□□□ 0.38
LRRK1-201ENST00000388948 LIG1P18858 919 aa17.43■□□□□ 0.38
LRRK1-201ENST00000388948 LDHCP07864 332 aa17.43■□□□□ 0.38
LRRK1-201ENST00000388948 MBD3O95983 291 aa17.43■□□□□ 0.38
LRRK1-201ENST00000388948 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
LRRK1-201ENST00000388948 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
LRRK1-201ENST00000388948 SLC4A8Q2Y0W8 1093 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 LDHAL6AQ6ZMR3 332 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 TFCP2L1Q9NZI6 479 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 EMILIN1Q9Y6C2 1016 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 MPHOSPH6Q99547 160 aaKnown RBP17.42■□□□□ 0.38
LRRK1-201ENST00000388948 DDB1Q16531 1140 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 TNMDQ9H2S6 317 aa17.42■□□□□ 0.38
LRRK1-201ENST00000388948 NPHP3Q7Z494 1330 aa17.41■□□□□ 0.38
LRRK1-201ENST00000388948 RPAP2Q8IXW5 612 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-201ENST00000388948 TXLNBQ8N3L3 684 aa17.41■□□□□ 0.38
LRRK1-201ENST00000388948 HDAC9Q9UKV0 1011 aa17.41■□□□□ 0.38
LRRK1-201ENST00000388948 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
LRRK1-201ENST00000388948 CWC25Q9NXE8 425 aaPredicted RBP17.41■□□□□ 0.38
LRRK1-201ENST00000388948 ATP5J2-PTCD1G3V325 749 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 ZRSR2Q15696 482 aaKnown RBP17.4■□□□□ 0.38
LRRK1-201ENST00000388948 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 FAM135AQ9P2D6 1515 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 RAB11FIP3O75154 756 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 GLRX3O76003 335 aaKnown RBP17.4■□□□□ 0.38
LRRK1-201ENST00000388948 TNRQ92752 1358 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 CASTP20810 708 aaKnown RBP17.4■□□□□ 0.38
LRRK1-201ENST00000388948 ANKRD18AQ8IVF6 992 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 DNAAF4Q8WXU2 420 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 CFAP45Q9UL16 551 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 NF2P35240 595 aa17.4■□□□□ 0.38
LRRK1-201ENST00000388948 CCDC8Q9H0W5 538 aaPredicted RBP17.4■□□□□ 0.38
LRRK1-201ENST00000388948 SPTY2D1Q68D10 685 aaPredicted RBP17.39■□□□□ 0.37
LRRK1-201ENST00000388948 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
LRRK1-201ENST00000388948 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
LRRK1-201ENST00000388948 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms