RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 TRAK2O60296 914 aa15.2■□□□□ 0.02
CDX2-201ENST00000381020 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
CDX2-201ENST00000381020 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
CDX2-201ENST00000381020 ATP7BP35670 1465 aa15.2■□□□□ 0.02
CDX2-201ENST00000381020 IL17REQ8NFR9 667 aa15.2■□□□□ 0.02
CDX2-201ENST00000381020 DCTPP1Q9H773 170 aa15.2■□□□□ 0.02
CDX2-201ENST00000381020 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.2■□□□□ 0.02
CDX2-201ENST00000381020 SETBP1Q9Y6X0 1596 aa15.2■□□□□ 0.02
CDX2-201ENST00000381020 SDSP20132 328 aa15.2■□□□□ 0.02
CDX2-201ENST00000381020 DNAJC2Q99543 621 aaKnown RBP15.2■□□□□ 0.02
CDX2-201ENST00000381020 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
CDX2-201ENST00000381020 IQGAP1P46940 1657 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 MYD88Q99836 296 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 RIMBP3CA6NJZ7 1639 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 RIMBP3BA6NNM3 1639 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 RIMBP3Q9UFD9 1639 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 TTC22Q5TAA0 569 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 NFATC2IPQ8NCF5 419 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 PTPRMP28827 1452 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 MAP3K5Q99683 1374 aa15.19■□□□□ 0.02
CDX2-201ENST00000381020 ADGRB1O14514 1584 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 ATP5J2-PTCD1G3V325 749 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 GTF2E1P29083 439 aaPredicted RBP15.18■□□□□ 0.02
CDX2-201ENST00000381020 MSH6P52701 1360 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 USP6P35125 1406 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 AATKQ6ZMQ8 1374 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 MROH1Q8NDA8 1641 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 AKAP4Q5JQC9 854 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 NRXN1Q9ULB1 1477 aa15.18■□□□□ 0.02
CDX2-201ENST00000381020 NUTM2BA6NNL0 878 aaPredicted RBP15.17■□□□□ 0.02
CDX2-201ENST00000381020 NUTM2EB1AL46 878 aaPredicted RBP15.17■□□□□ 0.02
CDX2-201ENST00000381020 KCNQ3O43525 872 aa15.17■□□□□ 0.02
CDX2-201ENST00000381020 NUTM2AQ8IVF1 878 aaPredicted RBP15.17■□□□□ 0.02
CDX2-201ENST00000381020 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
CDX2-201ENST00000381020 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
CDX2-201ENST00000381020 MROH2AA6NES4 1674 aa15.17■□□□□ 0.02
CDX2-201ENST00000381020 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
CDX2-201ENST00000381020 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
CDX2-201ENST00000381020 NLRP1Q9C000 1473 aa15.17■□□□□ 0.02
CDX2-201ENST00000381020 HTATSF1O43719 755 aaKnown RBP15.17■□□□□ 0.02
CDX2-201ENST00000381020 MCM4P33991 863 aa15.17■□□□□ 0.02
CDX2-201ENST00000381020 PIK3C2BO00750 1634 aa15.16■□□□□ 0.02
CDX2-201ENST00000381020 DEPDC5O75140 1603 aa15.16■□□□□ 0.02
CDX2-201ENST00000381020 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
CDX2-201ENST00000381020 IFNL2Q8IZJ0 200 aa15.16■□□□□ 0.02
CDX2-201ENST00000381020 NUCB2P80303 420 aa15.16■□□□□ 0.02
CDX2-201ENST00000381020 PDE1AP54750 535 aa15.16■□□□□ 0.02
CDX2-201ENST00000381020 ARHGEF40Q8TER5 1519 aa15.15■□□□□ 0.02
CDX2-201ENST00000381020 NAP1L5Q96NT1 182 aaPredicted RBP15.15■□□□□ 0.02
CDX2-201ENST00000381020 LARP1Q6PKG0 1096 aaKnown RBP15.15■□□□□ 0.02
CDX2-201ENST00000381020 IL27Q8NEV9 243 aa15.15■□□□□ 0.02
CDX2-201ENST00000381020 LARP6Q9BRS8 491 aaKnown RBP15.15■□□□□ 0.02
CDX2-201ENST00000381020 BOLA2Q9H3K6 86 aa15.15■□□□□ 0.02
CDX2-201ENST00000381020 USP19O94966 1318 aa15.14■□□□□ 0.01
CDX2-201ENST00000381020 ZNF853P0CG23 659 aa15.14■□□□□ 0.01
CDX2-201ENST00000381020 VPS37CA5D8V6 355 aaPredicted RBP15.14■□□□□ 0.01
CDX2-201ENST00000381020 PTMSP20962 102 aa15.14■□□□□ 0.01
CDX2-201ENST00000381020 COPS6Q7L5N1 327 aa15.14■□□□□ 0.01
CDX2-201ENST00000381020 PA2G4Q9UQ80 394 aaKnown RBP15.14■□□□□ 0.01
CDX2-201ENST00000381020 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
CDX2-201ENST00000381020 ZBTB3Q9H5J0 574 aa15.14■□□□□ 0.01
CDX2-201ENST00000381020 CLTCQ00610 1675 aaKnown RBP15.14■□□□□ 0.01
CDX2-201ENST00000381020 ERC1Q8IUD2 1116 aa15.13■□□□□ 0.01
CDX2-201ENST00000381020 HYPKQ9NX55 129 aa15.13■□□□□ 0.01
CDX2-201ENST00000381020 TOMM22Q9NS69 142 aa15.13■□□□□ 0.01
CDX2-201ENST00000381020 PNMA6EA0A0J9YXQ4 647 aa15.13■□□□□ 0.01
CDX2-201ENST00000381020 RNMTO43148 476 aaKnown RBP15.13■□□□□ 0.01
CDX2-201ENST00000381020 ATP8B2P98198 1209 aa15.13■□□□□ 0.01
CDX2-201ENST00000381020 UBE3BQ7Z3V4 1068 aa15.13■□□□□ 0.01
CDX2-201ENST00000381020 XAGE3Q8WTP9 111 aa15.13■□□□□ 0.01
CDX2-201ENST00000381020 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
CDX2-201ENST00000381020 SMC3Q9UQE7 1217 aa15.12■□□□□ 0.01
CDX2-201ENST00000381020 ABCC4O15439 1325 aa15.12■□□□□ 0.01
CDX2-201ENST00000381020 A0A087WZG4 1122 aa15.12■□□□□ 0.01
CDX2-201ENST00000381020 PNPLA6Q8IY17 1366 aa15.12■□□□□ 0.01
CDX2-201ENST00000381020 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
CDX2-201ENST00000381020 ADAMTS2O95450 1211 aa15.12■□□□□ 0.01
CDX2-201ENST00000381020 FOSBP53539 338 aa15.12■□□□□ 0.01
CDX2-201ENST00000381020 ZRSR1Q15695 479 aaKnown RBP15.12■□□□□ 0.01
CDX2-201ENST00000381020 FMNL2Q96PY5 1086 aa15.12■□□□□ 0.01
CDX2-201ENST00000381020 PIP4K2BP78356 416 aa15.11■□□□□ 0.01
CDX2-201ENST00000381020 SKOR2Q2VWA4 1001 aaPredicted RBP15.11■□□□□ 0.01
CDX2-201ENST00000381020 WASHC4Q2M389 1173 aa15.11■□□□□ 0.01
CDX2-201ENST00000381020 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
CDX2-201ENST00000381020 NBPF7P0C2Y1 421 aaPredicted RBP15.11■□□□□ 0.01
CDX2-201ENST00000381020 RNF20Q5VTR2 975 aa15.11■□□□□ 0.01
CDX2-201ENST00000381020 APPP05067 770 aa15.1■□□□□ 0.01
CDX2-201ENST00000381020 RAB11FIP3O75154 756 aa15.1■□□□□ 0.01
CDX2-201ENST00000381020 IGSF1Q8N6C5 1336 aa15.1■□□□□ 0.01
CDX2-201ENST00000381020 ARHGEF10O15013 1369 aa15.1■□□□□ 0.01
CDX2-201ENST00000381020 GLRX3O76003 335 aaKnown RBP15.1■□□□□ 0.01
CDX2-201ENST00000381020 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
CDX2-201ENST00000381020 ANKRD13DQ6ZTN6 518 aa15.1■□□□□ 0.01
CDX2-201ENST00000381020 SIRT2Q8IXJ6 389 aa15.1■□□□□ 0.01
CDX2-201ENST00000381020 SSFA2P28290 1259 aa15.09■□□□□ 0.01
CDX2-201ENST00000381020 DNTTIP2Q5QJE6 756 aaKnown RBP15.09■□□□□ 0.01
CDX2-201ENST00000381020 KSR2Q6VAB6 950 aa15.09■□□□□ 0.01
CDX2-201ENST00000381020 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
CDX2-201ENST00000381020 SNRPA1P09661 255 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms