RNA–Protein interactions for RNA: ENST00000380691.2

MSL3-204, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-204ENST00000380691 C9orf131Q5VYM1 1079 aa8.45□□□□□ -1.06
MSL3-204ENST00000380691 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
MSL3-204ENST00000380691 STAC3Q96MF2 364 aa8.45□□□□□ -1.06
MSL3-204ENST00000380691 BCS1LQ9Y276 419 aa8.45□□□□□ -1.06
MSL3-204ENST00000380691 TUBGCP6Q96RT7 1819 aa8.45□□□□□ -1.06
MSL3-204ENST00000380691 KCPQ6ZWJ8 1503 aa8.44□□□□□ -1.06
MSL3-204ENST00000380691 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
MSL3-204ENST00000380691 ARHGAP27Q6ZUM4 889 aa8.44□□□□□ -1.06
MSL3-204ENST00000380691 ZNF579Q8NAF0 562 aaKnown RBP8.44□□□□□ -1.06
MSL3-204ENST00000380691 PIK3C2AO00443 1686 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 FOXN1O15353 648 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 TGFB2P61812 414 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 ABHD8Q96I13 439 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 AK7Q96M32 723 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 DCBLD2Q96PD2 775 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 TSPYL2Q9H2G4 693 aaPredicted RBP8.43□□□□□ -1.06
MSL3-204ENST00000380691 CABP1Q9NZU7 370 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 TTC21BQ7Z4L5 1316 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 TTC21AQ8NDW8 1320 aa8.43□□□□□ -1.06
MSL3-204ENST00000380691 POTEMA6NI47 508 aa8.42□□□□□ -1.06
MSL3-204ENST00000380691 CTCFP49711 727 aaPredicted RBP8.42□□□□□ -1.06
MSL3-204ENST00000380691 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
MSL3-204ENST00000380691 ANKRD24Q8TF21 1146 aa8.42□□□□□ -1.06
MSL3-204ENST00000380691 RRAGCQ9HB90 399 aa8.42□□□□□ -1.06
MSL3-204ENST00000380691 CABP2Q9NPB3 220 aa8.42□□□□□ -1.06
MSL3-204ENST00000380691 PCNTO95613 3336 aa8.42□□□□□ -1.06
MSL3-204ENST00000380691 ZC3H4Q9UPT8 1303 aaKnown RBP8.41□□□□□ -1.06
MSL3-204ENST00000380691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.41□□□□□ -1.06
MSL3-204ENST00000380691 SSFA2P28290 1259 aa8.41□□□□□ -1.06
MSL3-204ENST00000380691 AIDAQ96BJ3 306 aa8.41□□□□□ -1.06
MSL3-204ENST00000380691 QRICH2Q9H0J4 1663 aa8.4□□□□□ -1.06
MSL3-204ENST00000380691 PALLDQ8WX93 1383 aa8.4□□□□□ -1.06
MSL3-204ENST00000380691 FCHSD2O94868 740 aa8.4□□□□□ -1.06
MSL3-204ENST00000380691 PHF14O94880 888 aa8.4□□□□□ -1.06
MSL3-204ENST00000380691 RNF181Q9P0P0 153 aa8.4□□□□□ -1.06
MSL3-204ENST00000380691 LY75O60449 1722 aa8.4□□□□□ -1.07
MSL3-204ENST00000380691 CENPJQ9HC77 1338 aaPredicted RBP8.39□□□□□ -1.07
MSL3-204ENST00000380691 A0A0G2JLW4 131 aa8.39□□□□□ -1.07
MSL3-204ENST00000380691 MMP10P09238 476 aa8.39□□□□□ -1.07
MSL3-204ENST00000380691 RGS19P49795 217 aa8.39□□□□□ -1.07
MSL3-204ENST00000380691 SPOCK2Q92563 424 aa8.39□□□□□ -1.07
MSL3-204ENST00000380691 PHF12Q96QT6 1004 aa8.39□□□□□ -1.07
MSL3-204ENST00000380691 VEGFAP15692 232 aaPredicted RBP8.38□□□□□ -1.07
MSL3-204ENST00000380691 AMIGO3Q86WK7 504 aa8.38□□□□□ -1.07
MSL3-204ENST00000380691 MKRN1Q9UHC7 482 aaKnown RBP8.38□□□□□ -1.07
MSL3-204ENST00000380691 CNTNAP1P78357 1384 aa8.37□□□□□ -1.07
MSL3-204ENST00000380691 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
MSL3-204ENST00000380691 USP54Q70EL1 1684 aa8.37□□□□□ -1.07
MSL3-204ENST00000380691 DPEP1P16444 411 aa8.37□□□□□ -1.07
MSL3-204ENST00000380691 POTEGQ6S5H5 508 aa8.37□□□□□ -1.07
MSL3-204ENST00000380691 ZCRB1Q8TBF4 217 aaKnown RBP8.37□□□□□ -1.07
MSL3-204ENST00000380691 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
MSL3-204ENST00000380691 TNRC6CQ9HCJ0 1690 aaKnown RBP8.37□□□□□ -1.07
MSL3-204ENST00000380691 NUBP1P53384 320 aa8.36□□□□□ -1.07
MSL3-204ENST00000380691 PPARGC1BQ86YN6 1023 aaKnown RBP8.36□□□□□ -1.07
MSL3-204ENST00000380691 SMARCC1Q92922 1105 aaPredicted RBP8.36□□□□□ -1.07
MSL3-204ENST00000380691 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
MSL3-204ENST00000380691 DOT1LQ8TEK3 1739 aa8.36□□□□□ -1.07
MSL3-204ENST00000380691 C5P01031 1676 aa8.36□□□□□ -1.07
MSL3-204ENST00000380691 CCDC85CA6NKD9 419 aa8.35□□□□□ -1.07
MSL3-204ENST00000380691 LBX1P52954 281 aa8.35□□□□□ -1.07
MSL3-204ENST00000380691 DALRD3Q5D0E6 543 aaKnown RBP8.35□□□□□ -1.07
MSL3-204ENST00000380691 SMIM5Q71RC9 77 aa8.35□□□□□ -1.07
MSL3-204ENST00000380691 OTUD5Q96G74 571 aa8.35□□□□□ -1.07
MSL3-204ENST00000380691 PIM2Q9P1W9 311 aa8.35□□□□□ -1.07
MSL3-204ENST00000380691 KTN1Q86UP2 1357 aaKnown RBP8.35□□□□□ -1.07
MSL3-204ENST00000380691 C4BP0C0L5 1744 aa8.34□□□□□ -1.07
MSL3-204ENST00000380691 MEGF6O75095 1541 aa8.34□□□□□ -1.07
MSL3-204ENST00000380691 CGNL1Q0VF96 1302 aa8.34□□□□□ -1.07
MSL3-204ENST00000380691 EVC2Q86UK5 1308 aa8.34□□□□□ -1.07
MSL3-204ENST00000380691 GLTPD2A6NH11 291 aa8.34□□□□□ -1.07
MSL3-204ENST00000380691 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
MSL3-204ENST00000380691 WBP1LQ9NX94 342 aa8.34□□□□□ -1.07
MSL3-204ENST00000380691 KDM6AO15550 1401 aaPredicted RBP8.34□□□□□ -1.07
MSL3-204ENST00000380691 TOGARAM1Q9Y4F4 1720 aa8.34□□□□□ -1.07
MSL3-204ENST00000380691 RGL2O15211 777 aa8.33□□□□□ -1.08
MSL3-204ENST00000380691 GNPATO15228 680 aa8.33□□□□□ -1.08
MSL3-204ENST00000380691 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
MSL3-204ENST00000380691 HSPA8P11142 646 aaKnown RBP8.33□□□□□ -1.08
MSL3-204ENST00000380691 TRIM26Q12899 539 aaPredicted RBP8.33□□□□□ -1.08
MSL3-204ENST00000380691 PKD1L3Q7Z443 1732 aa8.33□□□□□ -1.08
MSL3-204ENST00000380691 RASEFQ8IZ41 740 aa8.33□□□□□ -1.08
MSL3-204ENST00000380691 IP6K1Q92551 441 aa8.33□□□□□ -1.08
MSL3-204ENST00000380691 KIAA1210Q9ULL0 1709 aa8.33□□□□□ -1.08
MSL3-204ENST00000380691 KIAA1551Q9HCM1 1747 aa8.32□□□□□ -1.08
MSL3-204ENST00000380691 KCNA3P22001 575 aa8.32□□□□□ -1.08
MSL3-204ENST00000380691 LINC00116Q8NCU8 138 aa8.32□□□□□ -1.08
MSL3-204ENST00000380691 LTV1Q96GA3 475 aaPredicted RBP8.32□□□□□ -1.08
MSL3-204ENST00000380691 RGPD5Q99666 1765 aa8.32□□□□□ -1.08
MSL3-204ENST00000380691 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
MSL3-204ENST00000380691 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
MSL3-204ENST00000380691 LMNB1P20700 586 aa8.31□□□□□ -1.08
MSL3-204ENST00000380691 VEGFBP49765 207 aa8.31□□□□□ -1.08
MSL3-204ENST00000380691 TMF1P82094 1093 aa8.31□□□□□ -1.08
MSL3-204ENST00000380691 MPRIPQ6WCQ1 1025 aa8.31□□□□□ -1.08
MSL3-204ENST00000380691 NME9Q86XW9 330 aa8.31□□□□□ -1.08
MSL3-204ENST00000380691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.31□□□□□ -1.08
MSL3-204ENST00000380691 PARP3Q9Y6F1 533 aa8.31□□□□□ -1.08
MSL3-204ENST00000380691 LOC102724428A0A0B4J2F2 783 aa8.3□□□□□ -1.08
MSL3-204ENST00000380691 SIK1P57059 783 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms