RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 UBE2HP62256 183 aa11.16□□□□□ -0.62
SNX1-202ENST00000380285 STK3Q13188 491 aa11.16□□□□□ -0.62
SNX1-202ENST00000380285 FKBP15Q5T1M5 1219 aa11.16□□□□□ -0.62
SNX1-202ENST00000380285 FAM177A1Q8N128 213 aaPredicted RBP11.16□□□□□ -0.62
SNX1-202ENST00000380285 ERICH4A6NGS2 130 aa11.16□□□□□ -0.62
SNX1-202ENST00000380285 USO1O60763 962 aaKnown RBP11.16□□□□□ -0.62
SNX1-202ENST00000380285 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
SNX1-202ENST00000380285 CENPHQ9H3R5 247 aa11.16□□□□□ -0.62
SNX1-202ENST00000380285 NSD3Q9BZ95 1437 aa11.16□□□□□ -0.62
SNX1-202ENST00000380285 GCOM1H8Y6P7 765 aaPredicted RBP11.16□□□□□ -0.62
SNX1-202ENST00000380285 MYZAPP0CAP1 466 aa11.16□□□□□ -0.62
SNX1-202ENST00000380285 NBPF1Q3BBV0 1214 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 MSH5O43196 834 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 IVLP07476 585 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
SNX1-202ENST00000380285 CWC27Q6UX04 472 aaKnown RBP11.15□□□□□ -0.62
SNX1-202ENST00000380285 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
SNX1-202ENST00000380285 ATF3P18847 181 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 AEBP2Q6ZN18 517 aaPredicted RBP11.15□□□□□ -0.62
SNX1-202ENST00000380285 TBC1D32Q96NH3 1257 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 ZNF287Q9HBT7 754 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 POTEJP0CG39 1038 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 PAFAH1B1P43034 410 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 NLRP2Q9NX02 1062 aa11.15□□□□□ -0.62
SNX1-202ENST00000380285 HMGXB3Q12766 1538 aa11.15□□□□□ -0.63
SNX1-202ENST00000380285 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.63
SNX1-202ENST00000380285 TATP17735 454 aaPredicted RBP11.15□□□□□ -0.63
SNX1-202ENST00000380285 KANK3Q6NY19 840 aa11.15□□□□□ -0.63
SNX1-202ENST00000380285 RTEL1-TNFRSF6BF6WH68 1400 aa11.15□□□□□ -0.63
SNX1-202ENST00000380285 KIF20AO95235 890 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 FYB1O15117 783 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 ABTB2Q8N961 1025 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 PLCD4Q9BRC7 762 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 AKAP2Q9Y2D5 859 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 IL16Q14005 1332 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 TIGD1Q96MW7 591 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 PCF11O94913 1555 aaKnown RBP11.14□□□□□ -0.63
SNX1-202ENST00000380285 SRRTQ9BXP5 876 aaKnown RBP11.14□□□□□ -0.63
SNX1-202ENST00000380285 MAP2K1Q02750 393 aaPredicted RBP11.14□□□□□ -0.63
SNX1-202ENST00000380285 KIF14Q15058 1648 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 IKQ13123 557 aaPredicted RBP11.14□□□□□ -0.63
SNX1-202ENST00000380285 SKIDA1Q1XH10 827 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 TAX1BP1Q86VP1 789 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
SNX1-202ENST00000380285 FAM193AP78312 1265 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 TMEM132EQ6IEE7 984 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 KRT222Q8N1A0 295 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 PRAM1Q96QH2 718 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 TAOK3Q9H2K8 898 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 GIGYF2Q6Y7W6 1299 aaKnown RBP11.13□□□□□ -0.63
SNX1-202ENST00000380285 CDK19Q9BWU1 502 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 RALGAPBQ86X10 1494 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 YEATS4O95619 227 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 CBX1P83916 185 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 TSG101Q99816 390 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 CEP126Q9P2H0 1117 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 SMC1AQ14683 1233 aaKnown RBP11.13□□□□□ -0.63
SNX1-202ENST00000380285 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 URI1O94763 535 aaPredicted RBP11.13□□□□□ -0.63
SNX1-202ENST00000380285 LRSAM1Q6UWE0 723 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
SNX1-202ENST00000380285 DDX12PQ92771 950 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 ALS2CR12Q96Q35 445 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
SNX1-202ENST00000380285 GTPBP4Q9BZE4 634 aaKnown RBP11.12□□□□□ -0.63
SNX1-202ENST00000380285 RAB34Q9BZG1 259 aa11.12□□□□□ -0.63
SNX1-202ENST00000380285 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
SNX1-202ENST00000380285 CC2D2AQ9P2K1 1620 aa11.12□□□□□ -0.63
SNX1-202ENST00000380285 SYTL4Q96C24 671 aaPredicted RBP11.12□□□□□ -0.63
SNX1-202ENST00000380285 DNMBPQ6XZF7 1577 aa11.12□□□□□ -0.63
SNX1-202ENST00000380285 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
SNX1-202ENST00000380285 BAG4O95429 457 aaKnown RBP11.12□□□□□ -0.63
SNX1-202ENST00000380285 ADCY5O95622 1261 aa11.12□□□□□ -0.63
SNX1-202ENST00000380285 TUBBP07437 444 aa11.12□□□□□ -0.63
SNX1-202ENST00000380285 SNW1Q13573 536 aaKnown RBP11.12□□□□□ -0.63
SNX1-202ENST00000380285 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 SMARCC1Q92922 1105 aaPredicted RBP11.11□□□□□ -0.63
SNX1-202ENST00000380285 C8orf76Q96K31 380 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 RPRD2Q5VT52 1461 aaKnown RBP11.11□□□□□ -0.63
SNX1-202ENST00000380285 FAM114A1Q8IWE2 563 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 ZNF526Q8TF50 670 aaPredicted RBP11.11□□□□□ -0.63
SNX1-202ENST00000380285 SNX21Q969T3 373 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 XPCQ01831 940 aaPredicted RBP11.11□□□□□ -0.63
SNX1-202ENST00000380285 ANAPC15P60006 121 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 SPECC1LQ69YQ0 1117 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 TDO2P48775 406 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 CKAP4Q07065 602 aaKnown RBP11.11□□□□□ -0.63
SNX1-202ENST00000380285 HDAC1Q13547 482 aaPredicted RBP11.11□□□□□ -0.63
SNX1-202ENST00000380285 CEP135Q66GS9 1140 aa11.11□□□□□ -0.63
SNX1-202ENST00000380285 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
SNX1-202ENST00000380285 TRIM21P19474 475 aaKnown RBP11.1□□□□□ -0.63
SNX1-202ENST00000380285 IQGAP2Q13576 1575 aa11.1□□□□□ -0.63
SNX1-202ENST00000380285 GNAT3A8MTJ3 354 aa11.1□□□□□ -0.63
SNX1-202ENST00000380285 STX6O43752 255 aa11.1□□□□□ -0.63
SNX1-202ENST00000380285 CTR9Q6PD62 1173 aa11.1□□□□□ -0.63
SNX1-202ENST00000380285 IFT140Q96RY7 1462 aa11.1□□□□□ -0.63
SNX1-202ENST00000380285 ANKRD62A6NC57 917 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms