RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 ZNF853P0CG23 659 aa19.61■□□□□ 0.73
RPP40-202ENST00000380051 TEFQ10587 303 aa19.61■□□□□ 0.73
RPP40-202ENST00000380051 TAF7Q15545 349 aaPredicted RBP19.61■□□□□ 0.73
RPP40-202ENST00000380051 TRMT2AQ8IZ69 625 aaKnown RBP19.61■□□□□ 0.73
RPP40-202ENST00000380051 MARCH10Q8NA82 808 aaPredicted RBP19.61■□□□□ 0.73
RPP40-202ENST00000380051 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
RPP40-202ENST00000380051 VIRMAQ69YN4 1812 aaKnown RBP19.61■□□□□ 0.73
RPP40-202ENST00000380051 CHL1O00533 1208 aa19.6■□□□□ 0.73
RPP40-202ENST00000380051 POTEAQ6S8J7 498 aa19.6■□□□□ 0.73
RPP40-202ENST00000380051 SLC52A2Q9HAB3 445 aa19.59■□□□□ 0.73
RPP40-202ENST00000380051 LAS1LQ9Y4W2 734 aaKnown RBP19.59■□□□□ 0.73
RPP40-202ENST00000380051 CENPBP07199 599 aaPredicted RBP19.58■□□□□ 0.72
RPP40-202ENST00000380051 CABP4P57796 275 aa19.58■□□□□ 0.72
RPP40-202ENST00000380051 DUSP27Q5VZP5 1158 aa19.58■□□□□ 0.72
RPP40-202ENST00000380051 NFATC2IPQ8NCF5 419 aa19.56■□□□□ 0.72
RPP40-202ENST00000380051 MRC1P22897 1456 aa19.55■□□□□ 0.72
RPP40-202ENST00000380051 BTBD11A6QL63 1104 aa19.55■□□□□ 0.72
RPP40-202ENST00000380051 MBIPQ9NS73 344 aa19.55■□□□□ 0.72
RPP40-202ENST00000380051 TSPYL4Q9UJ04 414 aa19.55■□□□□ 0.72
RPP40-202ENST00000380051 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
RPP40-202ENST00000380051 FANCIQ9NVI1 1328 aa19.54■□□□□ 0.72
RPP40-202ENST00000380051 BCL9O00512 1426 aa19.54■□□□□ 0.72
RPP40-202ENST00000380051 KRT27Q7Z3Y8 459 aa19.54■□□□□ 0.72
RPP40-202ENST00000380051 TSR2Q969E8 191 aaKnown RBP19.53■□□□□ 0.72
RPP40-202ENST00000380051 TMOD3Q9NYL9 352 aa19.53■□□□□ 0.72
RPP40-202ENST00000380051 MIS18AQ9NYP9 233 aa19.53■□□□□ 0.72
RPP40-202ENST00000380051 KAT6BQ8WYB5 2073 aa19.52■□□□□ 0.72
RPP40-202ENST00000380051 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
RPP40-202ENST00000380051 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
RPP40-202ENST00000380051 BRWD3Q6RI45 1802 aa19.51■□□□□ 0.71
RPP40-202ENST00000380051 ITGB4P16144 1822 aa19.5■□□□□ 0.71
RPP40-202ENST00000380051 FAM196AQ6ZSG2 479 aa19.49■□□□□ 0.71
RPP40-202ENST00000380051 PIGBQ92521 554 aa19.49■□□□□ 0.71
RPP40-202ENST00000380051 RGS12O14924 1447 aa19.49■□□□□ 0.71
RPP40-202ENST00000380051 KDM3BQ7LBC6 1761 aa19.48■□□□□ 0.71
RPP40-202ENST00000380051 CT47B1P0C2W7 299 aaPredicted RBP19.48■□□□□ 0.71
RPP40-202ENST00000380051 EXOSC9Q06265 439 aaKnown RBP19.48■□□□□ 0.71
RPP40-202ENST00000380051 ZNF790Q6PG37 636 aa19.48■□□□□ 0.71
RPP40-202ENST00000380051 SYTL4Q96C24 671 aaPredicted RBP19.48■□□□□ 0.71
RPP40-202ENST00000380051 ACSBG1Q96GR2 724 aa19.48■□□□□ 0.71
RPP40-202ENST00000380051 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
RPP40-202ENST00000380051 TTC5Q8N0Z6 440 aa19.48■□□□□ 0.71
RPP40-202ENST00000380051 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
RPP40-202ENST00000380051 KCNQ3O43525 872 aa19.46■□□□□ 0.71
RPP40-202ENST00000380051 SLC39A6Q13433 755 aa19.46■□□□□ 0.71
RPP40-202ENST00000380051 FAM182BQ5T319 152 aa19.46■□□□□ 0.71
RPP40-202ENST00000380051 SOS1Q07889 1333 aaPredicted RBP19.46■□□□□ 0.71
RPP40-202ENST00000380051 C8orf58Q8NAV2 365 aa19.44■□□□□ 0.7
RPP40-202ENST00000380051 ZNF428Q96B54 188 aa19.44■□□□□ 0.7
RPP40-202ENST00000380051 KCNQ2O43526 872 aa19.43■□□□□ 0.7
RPP40-202ENST00000380051 VAMP4O75379 141 aa19.43■□□□□ 0.7
RPP40-202ENST00000380051 TWISTNBQ3B726 338 aaPredicted RBP19.43■□□□□ 0.7
RPP40-202ENST00000380051 FMNL2Q96PY5 1086 aa19.43■□□□□ 0.7
RPP40-202ENST00000380051 ATG3Q9NT62 314 aa19.43■□□□□ 0.7
RPP40-202ENST00000380051 HEG1Q9ULI3 1381 aa19.43■□□□□ 0.7
RPP40-202ENST00000380051 HOXB7P09629 217 aa19.42■□□□□ 0.7
RPP40-202ENST00000380051 SMARCC1Q92922 1105 aaPredicted RBP19.42■□□□□ 0.7
RPP40-202ENST00000380051 CHMP4AQ9BY43 222 aa19.42■□□□□ 0.7
RPP40-202ENST00000380051 ASAP1Q9ULH1 1129 aa19.42■□□□□ 0.7
RPP40-202ENST00000380051 SBF2Q86WG5 1849 aa19.42■□□□□ 0.7
RPP40-202ENST00000380051 PAPPAQ13219 1627 aa19.42■□□□□ 0.7
RPP40-202ENST00000380051 NHSQ6T4R5 1651 aa19.42■□□□□ 0.7
RPP40-202ENST00000380051 TSPYL6Q8N831 410 aa19.41■□□□□ 0.7
RPP40-202ENST00000380051 BCL11BQ9C0K0 894 aaPredicted RBP19.41■□□□□ 0.7
RPP40-202ENST00000380051 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
RPP40-202ENST00000380051 KRT24Q2M2I5 525 aa19.41■□□□□ 0.7
RPP40-202ENST00000380051 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
RPP40-202ENST00000380051 RCAN3Q9UKA8 241 aa19.41■□□□□ 0.7
RPP40-202ENST00000380051 GIGYF1O75420 1035 aaPredicted RBP19.4■□□□□ 0.7
RPP40-202ENST00000380051 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.69
RPP40-202ENST00000380051 SNRPA1P09661 255 aaKnown RBP19.39■□□□□ 0.69
RPP40-202ENST00000380051 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
RPP40-202ENST00000380051 U3KPZ7 1027 aaPredicted RBP19.39■□□□□ 0.69
RPP40-202ENST00000380051 KCPQ6ZWJ8 1503 aa19.38■□□□□ 0.69
RPP40-202ENST00000380051 PTCD1O75127 700 aaKnown RBP19.37■□□□□ 0.69
RPP40-202ENST00000380051 KCNA4P22459 653 aa19.37■□□□□ 0.69
RPP40-202ENST00000380051 ALDH1L2Q3SY69 923 aa19.37■□□□□ 0.69
RPP40-202ENST00000380051 RARSP54136 660 aaKnown RBP19.36■□□□□ 0.69
RPP40-202ENST00000380051 PTF1AQ7RTS3 328 aa19.36■□□□□ 0.69
RPP40-202ENST00000380051 TEX13AQ9BXU3 409 aaPredicted RBP19.36■□□□□ 0.69
RPP40-202ENST00000380051 BTAF1O14981 1849 aa19.36■□□□□ 0.69
RPP40-202ENST00000380051 TRIM37O94972 964 aa19.35■□□□□ 0.69
RPP40-202ENST00000380051 CCDC30Q5VVM6 783 aa19.35■□□□□ 0.69
RPP40-202ENST00000380051 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
RPP40-202ENST00000380051 PALLDQ8WX93 1383 aa19.35■□□□□ 0.69
RPP40-202ENST00000380051 HDGFL1Q5TGJ6 251 aa19.34■□□□□ 0.69
RPP40-202ENST00000380051 LOC102724428A0A0B4J2F2 783 aa19.33■□□□□ 0.68
RPP40-202ENST00000380051 EIF2S2P20042 333 aaKnown RBP19.33■□□□□ 0.68
RPP40-202ENST00000380051 BRPF1P55201 1214 aaPredicted RBP19.33■□□□□ 0.68
RPP40-202ENST00000380051 SIK1P57059 783 aa19.33■□□□□ 0.68
RPP40-202ENST00000380051 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.68
RPP40-202ENST00000380051 PRAMEF22A3QJZ6 481 aa19.32■□□□□ 0.68
RPP40-202ENST00000380051 USP16Q9Y5T5 823 aa19.32■□□□□ 0.68
RPP40-202ENST00000380051 SLC4A9Q96Q91 983 aa19.31■□□□□ 0.68
RPP40-202ENST00000380051 STK31Q9BXU1 1019 aa19.31■□□□□ 0.68
RPP40-202ENST00000380051 SMC4Q9NTJ3 1288 aa19.31■□□□□ 0.68
RPP40-202ENST00000380051 BCAR3O75815 825 aa19.3■□□□□ 0.68
RPP40-202ENST00000380051 ATP6V1AP38606 617 aa19.3■□□□□ 0.68
RPP40-202ENST00000380051 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
RPP40-202ENST00000380051 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms