RNA–Protein interactions for RNA: ENST00000380038.7

KLC1-205, Transcript of kinesin light chain 1, human

TSL 2 BASIC

Gene KLC1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-205	ENST00000380038	AMPH	P49418	695 aa		27.78	■■■□□ 2.04
KLC1-205	ENST00000380038	FLII	Q13045	1269 aa		27.78	■■■□□ 2.04
KLC1-205	ENST00000380038	ZNF445	P59923	1031 aa		27.77	■■■□□ 2.04
KLC1-205	ENST00000380038	FER1L4	A9Z1Z3	1794 aa		27.77	■■■□□ 2.04
KLC1-205	ENST00000380038	HTATSF1	O43719	755 aa	Known RBP	27.76	■■■□□ 2.04
KLC1-205	ENST00000380038	PPP1R9B	Q96SB3	815 aa		27.76	■■■□□ 2.04
KLC1-205	ENST00000380038	LRRCC1	Q9C099	1032 aa		27.76	■■■□□ 2.03
KLC1-205	ENST00000380038	AMOTL2	Q9Y2J4	779 aa		27.76	■■■□□ 2.03
KLC1-205	ENST00000380038	PNMA6E	A0A0J9YXQ4	647 aa		27.75	■■■□□ 2.03
KLC1-205	ENST00000380038	CCDC173	Q0VFZ6	552 aa		27.75	■■■□□ 2.03
KLC1-205	ENST00000380038	GNAI3	P08754	354 aa		27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	ATP8B2	P98198	1209 aa		27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	FKBP5	Q13451	457 aa	Predicted RBP	27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	CCDC30	Q5VVM6	783 aa		27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	CAVIN1	Q6NZI2	390 aa	Known RBP	27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	NGDN	Q8NEJ9	315 aa	Known RBP	27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	ESYT1	Q9BSJ8	1104 aa		27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	AK9	Q5TCS8	1911 aa		27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	NAP1L5	Q96NT1	182 aa	Predicted RBP	27.74	■■■□□ 2.03
KLC1-205	ENST00000380038	MX1	P20591	662 aa		27.73	■■■□□ 2.03
KLC1-205	ENST00000380038	ZSCAN23	Q3MJ62	389 aa		27.73	■■■□□ 2.03
KLC1-205	ENST00000380038	FMN2	Q9NZ56	1722 aa		27.72	■■■□□ 2.03
KLC1-205	ENST00000380038	NCL	P19338	710 aa	Known RBP	27.72	■■■□□ 2.03
KLC1-205	ENST00000380038	NEK4	P51957	841 aa		27.72	■■■□□ 2.03
KLC1-205	ENST00000380038	GNAT3	A8MTJ3	354 aa		27.72	■■■□□ 2.03
KLC1-205	ENST00000380038	EID1	Q9Y6B2	187 aa		27.72	■■■□□ 2.03
KLC1-205	ENST00000380038	PRPF40A	O75400	957 aa	Known RBP	27.71	■■■□□ 2.03
KLC1-205	ENST00000380038	NECTIN2	Q92692	538 aa		27.71	■■■□□ 2.03
KLC1-205	ENST00000380038	TMX3	Q96JJ7	454 aa		27.7	■■■□□ 2.03
KLC1-205	ENST00000380038	ARHGAP23	Q9P227	1491 aa		27.7	■■■□□ 2.02
KLC1-205	ENST00000380038	SLIT1	O75093	1534 aa		27.7	■■■□□ 2.02
KLC1-205	ENST00000380038	GPT2	Q8TD30	523 aa		27.69	■■■□□ 2.02
KLC1-205	ENST00000380038	STAP2	Q9UGK3	403 aa		27.69	■■■□□ 2.02
KLC1-205	ENST00000380038	CHML	P26374	656 aa		27.69	■■■□□ 2.02
KLC1-205	ENST00000380038	IL17RE	Q8NFR9	667 aa		27.68	■■■□□ 2.02
KLC1-205	ENST00000380038	PALD1	Q9ULE6	856 aa		27.68	■■■□□ 2.02
KLC1-205	ENST00000380038	LRRC37A3	O60309	1634 aa		27.68	■■■□□ 2.02
KLC1-205	ENST00000380038	LRRFIP2	Q9Y608	721 aa	Known RBP	27.68	■■■□□ 2.02
KLC1-205	ENST00000380038	CHAMP1	Q96JM3	812 aa		27.67	■■■□□ 2.02
KLC1-205	ENST00000380038	TBX22	Q9Y458	520 aa		27.67	■■■□□ 2.02
KLC1-205	ENST00000380038	MCM2	P49736	904 aa		27.67	■■■□□ 2.02
KLC1-205	ENST00000380038	NLRP6	P59044	892 aa		27.67	■■■□□ 2.02
KLC1-205	ENST00000380038	PRKCSH	P14314	528 aa	Predicted RBP	27.66	■■■□□ 2.02
KLC1-205	ENST00000380038	HOXC9	P31274	260 aa		27.66	■■■□□ 2.02
KLC1-205	ENST00000380038	USP44	Q9H0E7	712 aa		27.66	■■■□□ 2.02
KLC1-205	ENST00000380038	SOS1	Q07889	1333 aa	Predicted RBP	27.66	■■■□□ 2.02
KLC1-205	ENST00000380038	ANP32B	Q92688	251 aa	Known RBP	27.66	■■■□□ 2.02
KLC1-205	ENST00000380038	RILPL2	Q969X0	211 aa		27.66	■■■□□ 2.02
KLC1-205	ENST00000380038	PIK3C2A	O00443	1686 aa		27.65	■■■□□ 2.02
KLC1-205	ENST00000380038	CUL4A	Q13619	759 aa		27.65	■■■□□ 2.02
KLC1-205	ENST00000380038	XRN1	Q8IZH2	1706 aa	Known RBP	27.65	■■■□□ 2.02
KLC1-205	ENST00000380038	TRIM6-TRIM34	B2RNG4	842 aa		27.64	■■■□□ 2.02
KLC1-205	ENST00000380038	ANAPC15	P60006	121 aa		27.64	■■■□□ 2.02
KLC1-205	ENST00000380038	DIP2A	Q14689	1571 aa		27.64	■■■□□ 2.02
KLC1-205	ENST00000380038	MCC	P23508	829 aa		27.64	■■■□□ 2.02
KLC1-205	ENST00000380038	UNC5CL	Q8IV45	518 aa		27.64	■■■□□ 2.02
KLC1-205	ENST00000380038	SRCIN1	Q9C0H9	1055 aa		27.64	■■■□□ 2.02
KLC1-205	ENST00000380038	RBSN	Q9H1K0	784 aa		27.64	■■■□□ 2.02
KLC1-205	ENST00000380038	ANO2	Q9NQ90	1003 aa		27.64	■■■□□ 2.02
KLC1-205	ENST00000380038	FAM208A	Q9UK61	1670 aa	Known RBP	27.63	■■■□□ 2.01
KLC1-205	ENST00000380038	TAF7	Q15545	349 aa	Predicted RBP	27.63	■■■□□ 2.01
KLC1-205	ENST00000380038	THEMIS	Q8N1K5	641 aa	Predicted RBP	27.63	■■■□□ 2.01
KLC1-205	ENST00000380038	RBM27	Q9P2N5	1060 aa	Known RBP	27.63	■■■□□ 2.01
KLC1-205	ENST00000380038	MAP3K5	Q99683	1374 aa		27.63	■■■□□ 2.01
KLC1-205	ENST00000380038	NWD1	Q149M9	1564 aa		27.63	■■■□□ 2.01
KLC1-205	ENST00000380038	IL17RA	Q96F46	866 aa		27.63	■■■□□ 2.01
KLC1-205	ENST00000380038	BABAM1	Q9NWV8	329 aa		27.63	■■■□□ 2.01
KLC1-205	ENST00000380038	PRIM1	P49642	420 aa	Known RBP	27.62	■■■□□ 2.01
KLC1-205	ENST00000380038	TUBGCP6	Q96RT7	1819 aa		27.62	■■■□□ 2.01
KLC1-205	ENST00000380038	BRD1	O95696	1058 aa		27.61	■■■□□ 2.01
KLC1-205	ENST00000380038	NUTM2G	Q5VZR2	741 aa		27.61	■■■□□ 2.01
KLC1-205	ENST00000380038	UBTFL1	P0CB47	393 aa	Predicted RBP	27.6	■■■□□ 2.01
KLC1-205	ENST00000380038	FOXD4L5	Q5VV16	416 aa	Predicted RBP	27.6	■■■□□ 2.01
KLC1-205	ENST00000380038	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	27.6	■■■□□ 2.01
KLC1-205	ENST00000380038	PXDNL	A1KZ92	1463 aa		27.6	■■■□□ 2.01
KLC1-205	ENST00000380038	ZSCAN30	Q86W11	494 aa		27.59	■■■□□ 2.01
KLC1-205	ENST00000380038	SSH3	Q8TE77	659 aa		27.59	■■■□□ 2.01
KLC1-205	ENST00000380038	TMEM63C	Q9P1W3	806 aa		27.59	■■■□□ 2.01
KLC1-205	ENST00000380038	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.59	■■■□□ 2.01
KLC1-205	ENST00000380038	AOX1	Q06278	1338 aa		27.59	■■■□□ 2.01
KLC1-205	ENST00000380038	INTS4	Q96HW7	963 aa	Known RBP	27.59	■■■□□ 2.01
KLC1-205	ENST00000380038	IL25	Q9H293	177 aa		27.58	■■■□□ 2.01
KLC1-205	ENST00000380038	PHAX	Q9H814	394 aa	Known RBP	27.58	■■■□□ 2.01
KLC1-205	ENST00000380038	IL1RAPL2	Q9NP60	686 aa		27.58	■■■□□ 2.01
KLC1-205	ENST00000380038	HDGFL1	Q5TGJ6	251 aa		27.57	■■■□□ 2
KLC1-205	ENST00000380038	LTV1	Q96GA3	475 aa	Predicted RBP	27.57	■■■□□ 2
KLC1-205	ENST00000380038	RGPD8	O14715	1765 aa	Predicted RBP	27.57	■■■□□ 2
KLC1-205	ENST00000380038	NOL8	Q76FK4	1167 aa	Known RBP	27.55	■■■□□ 2
KLC1-205	ENST00000380038	PDLIM2	Q96JY6	352 aa		27.55	■■■□□ 2
KLC1-205	ENST00000380038	POLA2	Q14181	598 aa		27.55	■■■□□ 2
KLC1-205	ENST00000380038	LRSAM1	Q6UWE0	723 aa		27.55	■■■□□ 2
KLC1-205	ENST00000380038	NUTM1	Q86Y26	1132 aa		27.55	■■■□□ 2
KLC1-205	ENST00000380038	UPF3B	Q9BZI7	483 aa	Known RBP	27.55	■■■□□ 2
KLC1-205	ENST00000380038	PPP1R42	Q7Z4L9	355 aa		27.54	■■■□□ 2
KLC1-205	ENST00000380038	ANKAR	Q7Z5J8	1434 aa		27.54	■■■□□ 2
KLC1-205	ENST00000380038	EPB41L2	O43491	1005 aa	Known RBP	27.53	■■■□□ 2
KLC1-205	ENST00000380038	RAB11FIP3	O75154	756 aa		27.53	■■■□□ 2
KLC1-205	ENST00000380038	ABTB2	Q8N961	1025 aa		27.53	■■■□□ 2
KLC1-205	ENST00000380038	SYCE3	A1L190	88 aa		27.52	■■■□□ 2
KLC1-205	ENST00000380038	MBD3	O95983	291 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms