RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 C1orf141Q5JVX7 400 aa13.63□□□□□ -0.23
SMAD9-202ENST00000379826 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
SMAD9-202ENST00000379826 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
SMAD9-202ENST00000379826 BECN2A8MW95 431 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 SIL1Q9H173 461 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 SPG7Q9UQ90 795 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
SMAD9-202ENST00000379826 TRIM5Q9C035 493 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 PTPRCP08575 1304 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 NRDCO43847 1150 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 DTNBO60941 627 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 HMGB2P26583 209 aaKnown RBP13.62□□□□□ -0.23
SMAD9-202ENST00000379826 USHBP1Q8N6Y0 703 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 FSD1Q9BTV5 496 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 USP48Q86UV5 1035 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 KIF1BO60333 1816 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
SMAD9-202ENST00000379826 FERMT3Q86UX7 667 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 FOXO3O43524 673 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 PRPF40BQ6NWY9 871 aaKnown RBP13.61□□□□□ -0.23
SMAD9-202ENST00000379826 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 ADCY5O95622 1261 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 LMBRD1Q9NUN5 540 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 MAP3K4Q9Y6R4 1608 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 MYOM2P54296 1465 aa13.61□□□□□ -0.23
SMAD9-202ENST00000379826 OFD1O75665 1012 aa13.6□□□□□ -0.23
SMAD9-202ENST00000379826 CBX1P83916 185 aa13.6□□□□□ -0.23
SMAD9-202ENST00000379826 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
SMAD9-202ENST00000379826 CCDC183Q5T5S1 534 aa13.6□□□□□ -0.23
SMAD9-202ENST00000379826 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
SMAD9-202ENST00000379826 ERBB4Q15303 1308 aa13.6□□□□□ -0.23
SMAD9-202ENST00000379826 HSP90AB2PQ58FF8 381 aa13.6□□□□□ -0.23
SMAD9-202ENST00000379826 ABCA6Q8N139 1617 aa13.6□□□□□ -0.23
SMAD9-202ENST00000379826 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
SMAD9-202ENST00000379826 ZCCHC11Q5TAX3 1644 aaKnown RBP13.6□□□□□ -0.23
SMAD9-202ENST00000379826 MTERF4Q7Z6M4 381 aaKnown RBP13.6□□□□□ -0.23
SMAD9-202ENST00000379826 FLIIQ13045 1269 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 CDK11BP21127 795 aaKnown RBP13.59□□□□□ -0.23
SMAD9-202ENST00000379826 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
SMAD9-202ENST00000379826 SF3A1Q15459 793 aaKnown RBP13.59□□□□□ -0.23
SMAD9-202ENST00000379826 RNF20Q5VTR2 975 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
SMAD9-202ENST00000379826 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 NLRP2Q9NX02 1062 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 CCDC192P0DO97 292 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 G2E3Q7L622 706 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 C8orf37Q96NL8 207 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 ZFYVE16Q7Z3T8 1539 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 IL13P35225 146 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 RIMS2Q9UQ26 1411 aa13.59□□□□□ -0.23
SMAD9-202ENST00000379826 HCLS1P14317 486 aaPredicted RBP13.58□□□□□ -0.23
SMAD9-202ENST00000379826 AACSQ86V21 672 aa13.58□□□□□ -0.23
SMAD9-202ENST00000379826 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
SMAD9-202ENST00000379826 DNAJC2Q99543 621 aaKnown RBP13.58□□□□□ -0.24
SMAD9-202ENST00000379826 TNMDQ9H2S6 317 aa13.58□□□□□ -0.24
SMAD9-202ENST00000379826 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
SMAD9-202ENST00000379826 KDM4AO75164 1064 aa13.58□□□□□ -0.24
SMAD9-202ENST00000379826 ZKSCAN5Q9Y2L8 839 aa13.58□□□□□ -0.24
SMAD9-202ENST00000379826 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
SMAD9-202ENST00000379826 NPATQ14207 1427 aa13.58□□□□□ -0.24
SMAD9-202ENST00000379826 GIMAP6Q6P9H5 292 aa13.58□□□□□ -0.24
SMAD9-202ENST00000379826 TET3O43151 1660 aa13.58□□□□□ -0.24
SMAD9-202ENST00000379826 GJB2P29033 226 aa13.57□□□□□ -0.24
SMAD9-202ENST00000379826 GORABQ5T7V8 394 aa13.57□□□□□ -0.24
SMAD9-202ENST00000379826 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
SMAD9-202ENST00000379826 GPT2Q8TD30 523 aa13.57□□□□□ -0.24
SMAD9-202ENST00000379826 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
SMAD9-202ENST00000379826 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
SMAD9-202ENST00000379826 IQGAP1P46940 1657 aa13.57□□□□□ -0.24
SMAD9-202ENST00000379826 CHD1O14646 1710 aa13.57□□□□□ -0.24
SMAD9-202ENST00000379826 TPM4P67936 248 aa13.57□□□□□ -0.24
SMAD9-202ENST00000379826 PSMA5P28066 241 aa13.56□□□□□ -0.24
SMAD9-202ENST00000379826 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
SMAD9-202ENST00000379826 RIC3Q7Z5B4 369 aa13.56□□□□□ -0.24
SMAD9-202ENST00000379826 SIRT2Q8IXJ6 389 aa13.56□□□□□ -0.24
SMAD9-202ENST00000379826 ABCC4O15439 1325 aa13.56□□□□□ -0.24
SMAD9-202ENST00000379826 CKAP2LQ8IYA6 745 aa13.56□□□□□ -0.24
SMAD9-202ENST00000379826 TTC12Q9H892 705 aaPredicted RBP13.56□□□□□ -0.24
SMAD9-202ENST00000379826 STX6O43752 255 aa13.56□□□□□ -0.24
SMAD9-202ENST00000379826 GADD45BO75293 160 aaPredicted RBP13.56□□□□□ -0.24
SMAD9-202ENST00000379826 CHMP4AQ9BY43 222 aa13.56□□□□□ -0.24
SMAD9-202ENST00000379826 TMEM63CQ9P1W3 806 aa13.56□□□□□ -0.24
SMAD9-202ENST00000379826 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMAD9-202ENST00000379826 SBNO2Q9Y2G9 1366 aa13.55□□□□□ -0.24
SMAD9-202ENST00000379826 C17orf53Q8N3J3 647 aaPredicted RBP13.55□□□□□ -0.24
SMAD9-202ENST00000379826 KIF3AQ9Y496 699 aa13.55□□□□□ -0.24
SMAD9-202ENST00000379826 QRICH2Q9H0J4 1663 aa13.55□□□□□ -0.24
SMAD9-202ENST00000379826 SPATA32Q96LK8 384 aa13.55□□□□□ -0.24
SMAD9-202ENST00000379826 NUP62CLQ9H1M0 184 aa13.55□□□□□ -0.24
SMAD9-202ENST00000379826 RNF17Q9BXT8 1623 aaKnown RBP13.55□□□□□ -0.24
SMAD9-202ENST00000379826 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
SMAD9-202ENST00000379826 ZNF445P59923 1031 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms