RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MCM10Q7L590 875 aa13.22□□□□□ -0.29
POLR2J3-201ENST00000379340 PTPRCP08575 1304 aa13.22□□□□□ -0.29
POLR2J3-201ENST00000379340 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
POLR2J3-201ENST00000379340 ZBTB7BO15156 539 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-201ENST00000379340 EN1Q05925 392 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-201ENST00000379340 FAM182BQ5T319 152 aa13.21□□□□□ -0.29
POLR2J3-201ENST00000379340 MAP3K5Q99683 1374 aa13.2□□□□□ -0.3
POLR2J3-201ENST00000379340 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
POLR2J3-201ENST00000379340 ELL2O00472 640 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-201ENST00000379340 R3HDM1Q15032 1099 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-201ENST00000379340 NUTM2GQ5VZR2 741 aa13.2□□□□□ -0.3
POLR2J3-201ENST00000379340 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-201ENST00000379340 CACNA1FO60840 1977 aa13.2□□□□□ -0.3
POLR2J3-201ENST00000379340 GCC1Q96CN9 775 aa13.2□□□□□ -0.3
POLR2J3-201ENST00000379340 INTS3Q68E01 1043 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-201ENST00000379340 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
POLR2J3-201ENST00000379340 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
POLR2J3-201ENST00000379340 CAMTA1Q9Y6Y1 1673 aa13.19□□□□□ -0.3
POLR2J3-201ENST00000379340 USP19O94966 1318 aa13.18□□□□□ -0.3
POLR2J3-201ENST00000379340 BAG6P46379 1132 aa13.18□□□□□ -0.3
POLR2J3-201ENST00000379340 ABCA3Q99758 1704 aa13.18□□□□□ -0.3
POLR2J3-201ENST00000379340 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
POLR2J3-201ENST00000379340 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-201ENST00000379340 NWD2Q9ULI1 1742 aa13.17□□□□□ -0.3
POLR2J3-201ENST00000379340 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
POLR2J3-201ENST00000379340 ALS2Q96Q42 1657 aa13.17□□□□□ -0.3
POLR2J3-201ENST00000379340 FAM208AQ9UK61 1670 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-201ENST00000379340 NUCB1Q02818 461 aa13.16□□□□□ -0.3
POLR2J3-201ENST00000379340 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-201ENST00000379340 TNS3Q68CZ2 1445 aa13.16□□□□□ -0.3
POLR2J3-201ENST00000379340 A0A0G2JS52 829 aa13.15□□□□□ -0.3
POLR2J3-201ENST00000379340 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.3
POLR2J3-201ENST00000379340 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
POLR2J3-201ENST00000379340 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
POLR2J3-201ENST00000379340 NRAPQ86VF7 1730 aa13.15□□□□□ -0.31
POLR2J3-201ENST00000379340 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
POLR2J3-201ENST00000379340 TAF7Q15545 349 aaPredicted RBP13.14□□□□□ -0.31
POLR2J3-201ENST00000379340 EZH2Q15910 746 aaKnown RBP13.14□□□□□ -0.31
POLR2J3-201ENST00000379340 ARHGEF25Q86VW2 580 aa13.14□□□□□ -0.31
POLR2J3-201ENST00000379340 CHD1LQ86WJ1 897 aa13.14□□□□□ -0.31
POLR2J3-201ENST00000379340 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
POLR2J3-201ENST00000379340 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
POLR2J3-201ENST00000379340 CEMIPQ8WUJ3 1361 aa13.14□□□□□ -0.31
POLR2J3-201ENST00000379340 TNS1Q9HBL0 1735 aaKnown RBP13.13□□□□□ -0.31
POLR2J3-201ENST00000379340 GCP02774 474 aa13.13□□□□□ -0.31
POLR2J3-201ENST00000379340 ABCC6O95255 1503 aa13.13□□□□□ -0.31
POLR2J3-201ENST00000379340 RGPD2P0DJD1 1756 aa13.13□□□□□ -0.31
POLR2J3-201ENST00000379340 KDM3BQ7LBC6 1761 aa13.13□□□□□ -0.31
POLR2J3-201ENST00000379340 YY1P25490 414 aa13.12□□□□□ -0.31
POLR2J3-201ENST00000379340 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-201ENST00000379340 KRT24Q2M2I5 525 aa13.12□□□□□ -0.31
POLR2J3-201ENST00000379340 AMOTQ4VCS5 1084 aa13.12□□□□□ -0.31
POLR2J3-201ENST00000379340 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
POLR2J3-201ENST00000379340 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
POLR2J3-201ENST00000379340 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
POLR2J3-201ENST00000379340 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
POLR2J3-201ENST00000379340 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 HOXB7P09629 217 aa13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
POLR2J3-201ENST00000379340 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
POLR2J3-201ENST00000379340 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-201ENST00000379340 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
POLR2J3-201ENST00000379340 CAMKK2Q96RR4 588 aa13.1□□□□□ -0.31
POLR2J3-201ENST00000379340 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
POLR2J3-201ENST00000379340 ATP10DQ9P241 1426 aa13.1□□□□□ -0.31
POLR2J3-201ENST00000379340 BECN1Q14457 450 aa13.09□□□□□ -0.31
POLR2J3-201ENST00000379340 BMP2KLQ5H9B9 411 aa13.09□□□□□ -0.31
POLR2J3-201ENST00000379340 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
POLR2J3-201ENST00000379340 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
POLR2J3-201ENST00000379340 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
POLR2J3-201ENST00000379340 THSD7AQ9UPZ6 1657 aa13.09□□□□□ -0.31
POLR2J3-201ENST00000379340 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
POLR2J3-201ENST00000379340 SIRT2Q8IXJ6 389 aa13.08□□□□□ -0.32
POLR2J3-201ENST00000379340 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
POLR2J3-201ENST00000379340 LNPKQ9C0E8 428 aa13.08□□□□□ -0.32
POLR2J3-201ENST00000379340 DCTPP1Q9H773 170 aa13.08□□□□□ -0.32
POLR2J3-201ENST00000379340 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
POLR2J3-201ENST00000379340 HMMRO75330 724 aa13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 SEC24BO95487 1268 aa13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 ZBTB7CA1YPR0 619 aa13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 TRIM37O94972 964 aa13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 CEP85Q6P2H3 762 aa13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 USP35Q9P2H5 1018 aa13.07□□□□□ -0.32
POLR2J3-201ENST00000379340 RGPD5Q99666 1765 aa13.06□□□□□ -0.32
POLR2J3-201ENST00000379340 FLIIQ13045 1269 aa13.06□□□□□ -0.32
POLR2J3-201ENST00000379340 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-201ENST00000379340 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
POLR2J3-201ENST00000379340 CRYBG1Q9Y4K1 1723 aa13.06□□□□□ -0.32
POLR2J3-201ENST00000379340 SIPA1L3O60292 1781 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-201ENST00000379340 TEFQ10587 303 aa13.05□□□□□ -0.32
POLR2J3-201ENST00000379340 G2E3Q7L622 706 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms