RNA–Protein interactions for RNA: ENST00000378800.3

CCL19-202, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2 BASIC

Gene CCL19, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-202ENST00000378800 PAPPAQ13219 1627 aa17.7■□□□□ 0.42
CCL19-202ENST00000378800 ATP6V1AP38606 617 aa17.7■□□□□ 0.42
CCL19-202ENST00000378800 LINC00116Q8NCU8 138 aa17.7■□□□□ 0.42
CCL19-202ENST00000378800 GAS2L2Q8NHY3 880 aa17.7■□□□□ 0.42
CCL19-202ENST00000378800 RBM42Q9BTD8 480 aaKnown RBP17.7■□□□□ 0.42
CCL19-202ENST00000378800 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
CCL19-202ENST00000378800 PTCD1O75127 700 aaKnown RBP17.69■□□□□ 0.42
CCL19-202ENST00000378800 PTGER2P43116 358 aa17.69■□□□□ 0.42
CCL19-202ENST00000378800 AMIGO3Q86WK7 504 aa17.69■□□□□ 0.42
CCL19-202ENST00000378800 COL23A1Q86Y22 540 aaPredicted RBP17.68■□□□□ 0.42
CCL19-202ENST00000378800 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
CCL19-202ENST00000378800 MYBBP1AQ9BQG0 1328 aaKnown RBP17.68■□□□□ 0.42
CCL19-202ENST00000378800 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
CCL19-202ENST00000378800 MTFR1LQ9H019 292 aa17.67■□□□□ 0.42
CCL19-202ENST00000378800 PLEKHF1Q96S99 279 aa17.66■□□□□ 0.42
CCL19-202ENST00000378800 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
CCL19-202ENST00000378800 MAP3K5Q99683 1374 aa17.66■□□□□ 0.42
CCL19-202ENST00000378800 LY75O60449 1722 aa17.65■□□□□ 0.42
CCL19-202ENST00000378800 MSH5O43196 834 aa17.65■□□□□ 0.42
CCL19-202ENST00000378800 SLC16A10Q8TF71 515 aa17.65■□□□□ 0.42
CCL19-202ENST00000378800 AK7Q96M32 723 aa17.65■□□□□ 0.42
CCL19-202ENST00000378800 ITGB4P16144 1822 aa17.65■□□□□ 0.42
CCL19-202ENST00000378800 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
CCL19-202ENST00000378800 LRP5O75197 1615 aa17.63■□□□□ 0.41
CCL19-202ENST00000378800 PPP1R1BQ9UD71 204 aaPredicted RBP17.63■□□□□ 0.41
CCL19-202ENST00000378800 CASZ1Q86V15 1759 aa17.62■□□□□ 0.41
CCL19-202ENST00000378800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.62■□□□□ 0.41
CCL19-202ENST00000378800 TEFQ10587 303 aa17.62■□□□□ 0.41
CCL19-202ENST00000378800 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
CCL19-202ENST00000378800 MCM10Q7L590 875 aa17.62■□□□□ 0.41
CCL19-202ENST00000378800 GNPATO15228 680 aa17.61■□□□□ 0.41
CCL19-202ENST00000378800 PHF14O94880 888 aa17.61■□□□□ 0.41
CCL19-202ENST00000378800 RC3H1Q5TC82 1133 aaKnown RBP17.61■□□□□ 0.41
CCL19-202ENST00000378800 FLAD1Q8NFF5 587 aa17.61■□□□□ 0.41
CCL19-202ENST00000378800 CEMIPQ8WUJ3 1361 aa17.61■□□□□ 0.41
CCL19-202ENST00000378800 MSL1Q68DK7 614 aa17.6■□□□□ 0.41
CCL19-202ENST00000378800 DNAJC10Q8IXB1 793 aa17.6■□□□□ 0.41
CCL19-202ENST00000378800 MRC1P22897 1456 aa17.59■□□□□ 0.41
CCL19-202ENST00000378800 KCNQ3O43525 872 aa17.59■□□□□ 0.41
CCL19-202ENST00000378800 HTATSF1O43719 755 aaKnown RBP17.59■□□□□ 0.41
CCL19-202ENST00000378800 SSFA2P28290 1259 aa17.59■□□□□ 0.41
CCL19-202ENST00000378800 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
CCL19-202ENST00000378800 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
CCL19-202ENST00000378800 CRKLP46109 303 aaKnown RBP17.58■□□□□ 0.4
CCL19-202ENST00000378800 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
CCL19-202ENST00000378800 ZNF790Q6PG37 636 aa17.58■□□□□ 0.4
CCL19-202ENST00000378800 ARXQ96QS3 562 aa17.58■□□□□ 0.4
CCL19-202ENST00000378800 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
CCL19-202ENST00000378800 ADAMTS8Q9UP79 889 aa17.58■□□□□ 0.4
CCL19-202ENST00000378800 CNTNAP4Q9C0A0 1308 aa17.57■□□□□ 0.4
CCL19-202ENST00000378800 RPS6KA4O75676 772 aa17.57■□□□□ 0.4
CCL19-202ENST00000378800 NEFMP07197 916 aa17.57■□□□□ 0.4
CCL19-202ENST00000378800 ZNF496Q96IT1 587 aaPredicted RBP17.57■□□□□ 0.4
CCL19-202ENST00000378800 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
CCL19-202ENST00000378800 BTBD11A6QL63 1104 aa17.56■□□□□ 0.4
CCL19-202ENST00000378800 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
CCL19-202ENST00000378800 CCDC184Q52MB2 194 aa17.56■□□□□ 0.4
CCL19-202ENST00000378800 ARHGEF1Q92888 912 aaKnown RBP17.56■□□□□ 0.4
CCL19-202ENST00000378800 C4BP0C0L5 1744 aa17.55■□□□□ 0.4
CCL19-202ENST00000378800 ADAMTS7Q9UKP4 1686 aa17.55■□□□□ 0.4
CCL19-202ENST00000378800 TRAPPC3LQ5T215 181 aa17.55■□□□□ 0.4
CCL19-202ENST00000378800 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
CCL19-202ENST00000378800 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
CCL19-202ENST00000378800 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
CCL19-202ENST00000378800 FHDC1Q9C0D6 1143 aaPredicted RBP17.55■□□□□ 0.4
CCL19-202ENST00000378800 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
CCL19-202ENST00000378800 SCN11AQ9UI33 1791 aa17.54■□□□□ 0.4
CCL19-202ENST00000378800 POLD1P28340 1107 aa17.54■□□□□ 0.4
CCL19-202ENST00000378800 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCL19-202ENST00000378800 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
CCL19-202ENST00000378800 VSIG10Q8N0Z9 540 aa17.54■□□□□ 0.4
CCL19-202ENST00000378800 C5P01031 1676 aa17.54■□□□□ 0.4
CCL19-202ENST00000378800 MAPK8IP3Q9UPT6 1336 aa17.53■□□□□ 0.4
CCL19-202ENST00000378800 KCPQ6ZWJ8 1503 aa17.53■□□□□ 0.4
CCL19-202ENST00000378800 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
CCL19-202ENST00000378800 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
CCL19-202ENST00000378800 CCDC87Q9NVE4 849 aa17.53■□□□□ 0.4
CCL19-202ENST00000378800 RIPK4P57078 832 aa17.52■□□□□ 0.4
CCL19-202ENST00000378800 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.4
CCL19-202ENST00000378800 ADRA2BP18089 450 aa17.51■□□□□ 0.39
CCL19-202ENST00000378800 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
CCL19-202ENST00000378800 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
CCL19-202ENST00000378800 HEG1Q9ULI3 1381 aa17.51■□□□□ 0.39
CCL19-202ENST00000378800 TAF1LQ8IZX4 1826 aa17.5■□□□□ 0.39
CCL19-202ENST00000378800 RFC4P35249 363 aa17.5■□□□□ 0.39
CCL19-202ENST00000378800 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
CCL19-202ENST00000378800 TUBGCP6Q96RT7 1819 aa17.49■□□□□ 0.39
CCL19-202ENST00000378800 PRAMEF22A3QJZ6 481 aa17.49■□□□□ 0.39
CCL19-202ENST00000378800 STARD3NLO95772 234 aa17.49■□□□□ 0.39
CCL19-202ENST00000378800 GYS1P13807 737 aa17.49■□□□□ 0.39
CCL19-202ENST00000378800 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
CCL19-202ENST00000378800 ZBTB1Q9Y2K1 713 aa17.49■□□□□ 0.39
CCL19-202ENST00000378800 QSER1Q2KHR3 1735 aa17.48■□□□□ 0.39
CCL19-202ENST00000378800 ANP32CO43423 234 aa17.48■□□□□ 0.39
CCL19-202ENST00000378800 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
CCL19-202ENST00000378800 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
CCL19-202ENST00000378800 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
CCL19-202ENST00000378800 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
CCL19-202ENST00000378800 SOS1Q07889 1333 aaPredicted RBP17.47■□□□□ 0.39
CCL19-202ENST00000378800 A1BGP04217 495 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms