RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CACNA1FO60840 1977 aa9.93□□□□□ -0.82
PTPRR-203ENST00000378778 FAM193AP78312 1265 aa9.92□□□□□ -0.82
PTPRR-203ENST00000378778 PDCL2Q8N4E4 241 aa9.92□□□□□ -0.82
PTPRR-203ENST00000378778 ZGPATQ8N5A5 531 aaKnown RBP9.92□□□□□ -0.82
PTPRR-203ENST00000378778 IL13P35225 146 aa9.92□□□□□ -0.82
PTPRR-203ENST00000378778 C1orf115Q9H7X2 142 aa9.92□□□□□ -0.82
PTPRR-203ENST00000378778 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
PTPRR-203ENST00000378778 MON2Q7Z3U7 1717 aa9.92□□□□□ -0.82
PTPRR-203ENST00000378778 MX1P20591 662 aa9.91□□□□□ -0.82
PTPRR-203ENST00000378778 PKP1Q13835 747 aa9.91□□□□□ -0.82
PTPRR-203ENST00000378778 DNTTIP2Q5QJE6 756 aaKnown RBP9.91□□□□□ -0.82
PTPRR-203ENST00000378778 SOS1Q07889 1333 aaPredicted RBP9.91□□□□□ -0.82
PTPRR-203ENST00000378778 CCT4P50991 539 aaKnown RBP9.91□□□□□ -0.82
PTPRR-203ENST00000378778 NEK4P51957 841 aa9.91□□□□□ -0.82
PTPRR-203ENST00000378778 PREX1Q8TCU6 1659 aa9.91□□□□□ -0.82
PTPRR-203ENST00000378778 ESYT1Q9BSJ8 1104 aa9.91□□□□□ -0.82
PTPRR-203ENST00000378778 ZSCAN20P17040 1043 aaPredicted RBP9.9□□□□□ -0.82
PTPRR-203ENST00000378778 UBE2HP62256 183 aa9.9□□□□□ -0.82
PTPRR-203ENST00000378778 TSPYL6Q8N831 410 aa9.9□□□□□ -0.82
PTPRR-203ENST00000378778 STAP2Q9UGK3 403 aa9.9□□□□□ -0.82
PTPRR-203ENST00000378778 CFAP65Q6ZU64 1925 aaKnown RBP9.9□□□□□ -0.82
PTPRR-203ENST00000378778 ALKQ9UM73 1620 aa9.9□□□□□ -0.82
PTPRR-203ENST00000378778 NEO1Q92859 1461 aa9.9□□□□□ -0.82
PTPRR-203ENST00000378778 RPAP1Q9BWH6 1393 aaPredicted RBP9.9□□□□□ -0.82
PTPRR-203ENST00000378778 PDE1AP54750 535 aa9.9□□□□□ -0.82
PTPRR-203ENST00000378778 SALL3Q9BXA9 1300 aa9.89□□□□□ -0.83
PTPRR-203ENST00000378778 AKAP12Q02952 1782 aa9.89□□□□□ -0.83
PTPRR-203ENST00000378778 CTIFO43310 598 aaKnown RBP9.89□□□□□ -0.83
PTPRR-203ENST00000378778 KDM4AO75164 1064 aa9.89□□□□□ -0.83
PTPRR-203ENST00000378778 ANKRD7Q92527 254 aa9.89□□□□□ -0.83
PTPRR-203ENST00000378778 MYO5BQ9ULV0 1848 aa9.88□□□□□ -0.83
PTPRR-203ENST00000378778 CHL1O00533 1208 aa9.88□□□□□ -0.83
PTPRR-203ENST00000378778 CREBRFQ8IUR6 639 aa9.88□□□□□ -0.83
PTPRR-203ENST00000378778 C8orf58Q8NAV2 365 aa9.88□□□□□ -0.83
PTPRR-203ENST00000378778 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.88□□□□□ -0.83
PTPRR-203ENST00000378778 PXDNLA1KZ92 1463 aa9.88□□□□□ -0.83
PTPRR-203ENST00000378778 CHD2O14647 1828 aaKnown RBP9.87□□□□□ -0.83
PTPRR-203ENST00000378778 ADCY5O95622 1261 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 KIAA1524Q8TCG1 905 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 PHACTR3Q96KR7 559 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 CDK19Q9BWU1 502 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 SPATA31D1Q6ZQQ2 1576 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 MSH6P52701 1360 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 GABPB1Q06547 395 aaPredicted RBP9.87□□□□□ -0.83
PTPRR-203ENST00000378778 USP48Q86UV5 1035 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 AEBP1Q8IUX7 1158 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 NSFL1CQ9UNZ2 370 aaKnown RBP9.87□□□□□ -0.83
PTPRR-203ENST00000378778 C3P01024 1663 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 CCDC171Q6TFL3 1326 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 DIP2CQ9Y2E4 1556 aa9.87□□□□□ -0.83
PTPRR-203ENST00000378778 GNAI3P08754 354 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 CAVIN2O95810 425 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 ZSCAN22P10073 491 aaPredicted RBP9.86□□□□□ -0.83
PTPRR-203ENST00000378778 CHMLP26374 656 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.86□□□□□ -0.83
PTPRR-203ENST00000378778 C16orf71Q8IYS4 520 aaPredicted RBP9.86□□□□□ -0.83
PTPRR-203ENST00000378778 RNF214Q8ND24 703 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 PRAM1Q96QH2 718 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 OGFRQ9NZT2 677 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 GNAI2P04899 355 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 SIRT1Q96EB6 747 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 ZSCAN31Q96LW9 406 aaPredicted RBP9.86□□□□□ -0.83
PTPRR-203ENST00000378778 FUCA2Q9BTY2 467 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 LRRCC1Q9C099 1032 aa9.86□□□□□ -0.83
PTPRR-203ENST00000378778 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
PTPRR-203ENST00000378778 RGPD1P0DJD0 1748 aa9.85□□□□□ -0.83
PTPRR-203ENST00000378778 CRYBG1Q9Y4K1 1723 aa9.85□□□□□ -0.83
PTPRR-203ENST00000378778 HSPA4P34932 840 aa9.85□□□□□ -0.83
PTPRR-203ENST00000378778 BCL2L12Q9HB09 334 aa9.85□□□□□ -0.83
PTPRR-203ENST00000378778 PPP4R3BQ5MIZ7 849 aa9.85□□□□□ -0.83
PTPRR-203ENST00000378778 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
PTPRR-203ENST00000378778 PAXBP1Q9Y5B6 917 aa9.85□□□□□ -0.83
PTPRR-203ENST00000378778 RAB11FIP3O75154 756 aa9.84□□□□□ -0.83
PTPRR-203ENST00000378778 SH2B1Q9NRF2 756 aaPredicted RBP9.84□□□□□ -0.83
PTPRR-203ENST00000378778 CGNQ9P2M7 1197 aaKnown RBP9.84□□□□□ -0.83
PTPRR-203ENST00000378778 MINK1Q8N4C8 1332 aaPredicted RBP9.84□□□□□ -0.83
PTPRR-203ENST00000378778 SMTNL1A8MU46 457 aa9.84□□□□□ -0.83
PTPRR-203ENST00000378778 CCDC192P0DO97 292 aa9.84□□□□□ -0.83
PTPRR-203ENST00000378778 OTUD7AQ8TE49 926 aaPredicted RBP9.84□□□□□ -0.83
PTPRR-203ENST00000378778 ADGRL3Q9HAR2 1447 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 TCHHQ07283 1943 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 ELP1O95163 1332 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 XRN1Q8IZH2 1706 aaKnown RBP9.83□□□□□ -0.84
PTPRR-203ENST00000378778 ATXN8OSP0DMR3 200 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 NEMFO60524 1076 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 ATP8B2P98198 1209 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 IDI1Q13907 227 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 GGT6Q6P531 493 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 NALCNQ8IZF0 1738 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 RTF1Q92541 710 aaKnown RBP9.83□□□□□ -0.84
PTPRR-203ENST00000378778 TM6SF1Q9BZW5 370 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 BABAM1Q9NWV8 329 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 LIMCH1Q9UPQ0 1083 aa9.83□□□□□ -0.84
PTPRR-203ENST00000378778 STX6O43752 255 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 F13A1P00488 732 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 HMOX1P09601 288 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 COG3Q96JB2 828 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 CHMP4AQ9BY43 222 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 FAM208AQ9UK61 1670 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms