RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 SETQ01105 290 aaPredicted RBP8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 WDR63Q8IWG1 891 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 SGSM3Q96HU1 749 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 DNAJC2Q99543 621 aaKnown RBP8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 ZNF518AQ6AHZ1 1483 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 ANKRD26Q9UPS8 1709 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 MAP4K4O95819 1239 aaPredicted RBP8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 HMGN5P82970 282 aaKnown RBP8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 TMEM51Q9NW97 253 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 CFDP1Q9UEE9 299 aaPredicted RBP8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 BAG4O95429 457 aaKnown RBP8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 ZSCAN23Q3MJ62 389 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 PPP4R3BQ5MIZ7 849 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 RBSNQ9H1K0 784 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 LMBRD1Q9NUN5 540 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 ERCC6Q03468 1493 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 MAP3K4Q9Y6R4 1608 aa8.2□□□□□ -1.1
CDKAL1-202ENST00000378610 MYOM2P54296 1465 aa8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 CT47B1P0C2W7 299 aaPredicted RBP8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 PRIMPOLQ96LW4 560 aa8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 CD2BP2O95400 341 aaKnown RBP8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 TAGLNQ01995 201 aaKnown RBP8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 TAF3Q5VWG9 929 aa8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 EMILIN3Q9NT22 766 aa8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 SETBP1Q9Y6X0 1596 aa8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 NRXN1Q9ULB1 1477 aa8.19□□□□□ -1.1
CDKAL1-202ENST00000378610 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 HIC1Q14526 733 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 BEGAINQ9BUH8 593 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 PTPRTO14522 1441 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 XPCQ01831 940 aaPredicted RBP8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 APBB1IPQ7Z5R6 666 aaPredicted RBP8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 VWDEQ8N2E2 1590 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 SLC20A2Q08357 652 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 MYSM1Q5VVJ2 828 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 NPAS4Q8IUM7 802 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 SPTLC3Q9NUV7 552 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 CCDC39Q9UFE4 941 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 ZHX1Q9UKY1 873 aaPredicted RBP8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 KNSTRNQ9Y448 316 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 KNDC1Q76NI1 1749 aa8.18□□□□□ -1.1
CDKAL1-202ENST00000378610 LMOD1P29536 600 aaPredicted RBP8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 NLRP6P59044 892 aa8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 NUCB1Q02818 461 aa8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 BMP2KLQ5H9B9 411 aa8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 TSPYL2Q9H2G4 693 aaPredicted RBP8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 TNNQ9UQP3 1299 aa8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 PALM3A6NDB9 673 aaPredicted RBP8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 PARNO95453 639 aaKnown RBP8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 ANKRD7Q92527 254 aa8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 LNPKQ9C0E8 428 aa8.17□□□□□ -1.1
CDKAL1-202ENST00000378610 TET3O43151 1660 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 SSFA2P28290 1259 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 FOXD4L6Q3SYB3 417 aaPredicted RBP8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 PHLDB3Q6NSJ2 640 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 FOXD4L3Q6VB84 417 aaPredicted RBP8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 CCDC146Q8IYE0 955 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 CDC42BPGQ6DT37 1551 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 PIK3R4Q99570 1358 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 VAMP1P23763 118 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 LRSAM1Q6UWE0 723 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 IPO4Q8TEX9 1081 aaKnown RBP8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 GRXCR2A6NFK2 248 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 ATP2B3Q16720 1220 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 EVI5LQ96CN4 794 aa8.16□□□□□ -1.1
CDKAL1-202ENST00000378610 ATG7O95352 703 aa8.15□□□□□ -1.1
CDKAL1-202ENST00000378610 GAS2L2Q8NHY3 880 aa8.15□□□□□ -1.1
CDKAL1-202ENST00000378610 GPT2Q8TD30 523 aa8.15□□□□□ -1.1
CDKAL1-202ENST00000378610 ANP32BQ92688 251 aaKnown RBP8.15□□□□□ -1.1
CDKAL1-202ENST00000378610 QRICH2Q9H0J4 1663 aa8.15□□□□□ -1.1
CDKAL1-202ENST00000378610 CTIFO43310 598 aaKnown RBP8.15□□□□□ -1.11
CDKAL1-202ENST00000378610 C7P10643 843 aa8.15□□□□□ -1.11
CDKAL1-202ENST00000378610 SSTR3P32745 418 aaPredicted RBP8.15□□□□□ -1.11
CDKAL1-202ENST00000378610 PRIM1P49642 420 aaKnown RBP8.15□□□□□ -1.11
CDKAL1-202ENST00000378610 TMA7Q9Y2S6 64 aaKnown RBP8.15□□□□□ -1.11
CDKAL1-202ENST00000378610 COL3A1P02461 1466 aaPredicted RBP8.15□□□□□ -1.11
CDKAL1-202ENST00000378610 PIBF1Q8WXW3 757 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 CREBZFQ9NS37 354 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 ADGRB1O14514 1584 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 ERCC6L2Q5T890 1561 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 ANKRD33BA6NCL7 494 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 ZBTB40Q9NUA8 1239 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 SYCP2Q9BX26 1530 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 PPIP5K1Q6PFW1 1433 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 ABCC1P33527 1531 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 MDM2Q00987 491 aaPredicted RBP8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 FKBP5Q13451 457 aaPredicted RBP8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 NOP9Q86U38 636 aaKnown RBP8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 TMTC2Q8N394 836 aa8.14□□□□□ -1.11
CDKAL1-202ENST00000378610 GOLGA6L22H0YM25 854 aa8.13□□□□□ -1.11
CDKAL1-202ENST00000378610 ERCC5P28715 1186 aaPredicted RBP8.13□□□□□ -1.11
CDKAL1-202ENST00000378610 RUNDC1Q96C34 613 aa8.13□□□□□ -1.11
CDKAL1-202ENST00000378610 DDX49Q9Y6V7 483 aaKnown RBP8.13□□□□□ -1.11
CDKAL1-202ENST00000378610 ABCA9Q8IUA7 1624 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms