RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 SYCE3A1L190 88 aa17.07■□□□□ 0.32
PRDM16-203ENST00000378391 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
PRDM16-203ENST00000378391 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
PRDM16-203ENST00000378391 CDK19Q9BWU1 502 aa17.07■□□□□ 0.32
PRDM16-203ENST00000378391 MAGEC2Q9UBF1 373 aaPredicted RBP17.07■□□□□ 0.32
PRDM16-203ENST00000378391 MPNDQ8N594 471 aa17.07■□□□□ 0.32
PRDM16-203ENST00000378391 CBFA2T2O43439 604 aa17.06■□□□□ 0.32
PRDM16-203ENST00000378391 KLHL40Q2TBA0 621 aa17.06■□□□□ 0.32
PRDM16-203ENST00000378391 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
PRDM16-203ENST00000378391 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
PRDM16-203ENST00000378391 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
PRDM16-203ENST00000378391 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
PRDM16-203ENST00000378391 KRT32Q14532 448 aa17.06■□□□□ 0.32
PRDM16-203ENST00000378391 ZNHIT6Q9NWK9 470 aaKnown RBP17.06■□□□□ 0.32
PRDM16-203ENST00000378391 PPFIBP1Q86W92 1011 aa17.06■□□□□ 0.32
PRDM16-203ENST00000378391 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
PRDM16-203ENST00000378391 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 STK3Q13188 491 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 PDCL2Q8N4E4 241 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 ATAD2Q6PL18 1390 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 SLC52A1Q9NWF4 448 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
PRDM16-203ENST00000378391 RPGRIP1LQ68CZ1 1315 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 TMCO5BA8MYB1 307 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 ERLIN1O75477 346 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
PRDM16-203ENST00000378391 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
PRDM16-203ENST00000378391 TRIM22Q8IYM9 498 aa17.04■□□□□ 0.32
PRDM16-203ENST00000378391 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
PRDM16-203ENST00000378391 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRDM16-203ENST00000378391 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
PRDM16-203ENST00000378391 JAKMIP1Q96N16 626 aaKnown RBP17.04■□□□□ 0.32
PRDM16-203ENST00000378391 AXDND1Q5T1B0 1012 aaPredicted RBP17.04■□□□□ 0.32
PRDM16-203ENST00000378391 RBM33Q96EV2 1170 aaKnown RBP17.03■□□□□ 0.32
PRDM16-203ENST00000378391 MAP3K11Q16584 847 aa17.03■□□□□ 0.32
PRDM16-203ENST00000378391 FYB1O15117 783 aa17.03■□□□□ 0.32
PRDM16-203ENST00000378391 EIF3JO75822 258 aaKnown RBP17.02■□□□□ 0.32
PRDM16-203ENST00000378391 RBM42Q9BTD8 480 aaKnown RBP17.02■□□□□ 0.32
PRDM16-203ENST00000378391 NOS1P29475 1434 aa17.02■□□□□ 0.31
PRDM16-203ENST00000378391 ZSCAN23Q3MJ62 389 aa17.02■□□□□ 0.31
PRDM16-203ENST00000378391 ODF2Q5BJF6 829 aa17.02■□□□□ 0.31
PRDM16-203ENST00000378391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.02■□□□□ 0.31
PRDM16-203ENST00000378391 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.31
PRDM16-203ENST00000378391 KDM5DQ9BY66 1539 aa17.01■□□□□ 0.31
PRDM16-203ENST00000378391 UPF3BQ9BZI7 483 aaKnown RBP17.01■□□□□ 0.31
PRDM16-203ENST00000378391 TARBP1Q13395 1621 aaKnown RBP17.01■□□□□ 0.31
PRDM16-203ENST00000378391 KIF2AO00139 706 aaPredicted RBP17.01■□□□□ 0.31
PRDM16-203ENST00000378391 FILIP1Q7Z7B0 1213 aa17.01■□□□□ 0.31
PRDM16-203ENST00000378391 KDM4AO75164 1064 aa17.01■□□□□ 0.31
PRDM16-203ENST00000378391 KIAA0754O94854 1291 aa17.01■□□□□ 0.31
PRDM16-203ENST00000378391 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
PRDM16-203ENST00000378391 CWC27Q6UX04 472 aaKnown RBP17.01■□□□□ 0.31
PRDM16-203ENST00000378391 ANTXR1Q9H6X2 564 aa17.01■□□□□ 0.31
PRDM16-203ENST00000378391 LUC7LQ9NQ29 371 aaKnown RBP17.01■□□□□ 0.31
PRDM16-203ENST00000378391 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
PRDM16-203ENST00000378391 ZRSR2Q15696 482 aaKnown RBP17.01■□□□□ 0.31
PRDM16-203ENST00000378391 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
PRDM16-203ENST00000378391 NSD2O96028 1365 aa17.01■□□□□ 0.31
PRDM16-203ENST00000378391 AACSQ86V21 672 aa17■□□□□ 0.31
PRDM16-203ENST00000378391 ZHX1Q9UKY1 873 aaPredicted RBP17■□□□□ 0.31
PRDM16-203ENST00000378391 ATF3P18847 181 aa17■□□□□ 0.31
PRDM16-203ENST00000378391 CTNNA3Q9UI47 895 aa17■□□□□ 0.31
PRDM16-203ENST00000378391 IL16Q14005 1332 aa17■□□□□ 0.31
PRDM16-203ENST00000378391 SMTNL1A8MU46 457 aa17■□□□□ 0.31
PRDM16-203ENST00000378391 CDKL5O76039 1030 aa17■□□□□ 0.31
PRDM16-203ENST00000378391 STIM1Q13586 685 aa17■□□□□ 0.31
PRDM16-203ENST00000378391 MAP4K4O95819 1239 aaPredicted RBP17■□□□□ 0.31
PRDM16-203ENST00000378391 IL1RAPL2Q9NP60 686 aa17■□□□□ 0.31
PRDM16-203ENST00000378391 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
PRDM16-203ENST00000378391 GTF2A1P52655 376 aaPredicted RBP16.99■□□□□ 0.31
PRDM16-203ENST00000378391 NACAP1Q9BZK3 213 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 CDK5RAP3Q96JB5 506 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 PSMD1Q99460 953 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
PRDM16-203ENST00000378391 TXLNBQ8N3L3 684 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 SIL1Q9H173 461 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 BCCIPQ9P287 314 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRDM16-203ENST00000378391 USP19O94966 1318 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 TXNDC2Q86VQ3 553 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 MAST1Q9Y2H9 1570 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
PRDM16-203ENST00000378391 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
PRDM16-203ENST00000378391 ERICH4A6NGS2 130 aa16.98■□□□□ 0.31
PRDM16-203ENST00000378391 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
PRDM16-203ENST00000378391 CCAR1Q8IX12 1150 aaKnown RBP16.98■□□□□ 0.31
PRDM16-203ENST00000378391 ZSCAN25Q6NSZ9 544 aa16.98■□□□□ 0.31
PRDM16-203ENST00000378391 TDO2P48775 406 aa16.98■□□□□ 0.31
PRDM16-203ENST00000378391 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
PRDM16-203ENST00000378391 RTEL1-TNFRSF6BF6WH68 1400 aa16.98■□□□□ 0.31
PRDM16-203ENST00000378391 CCDC183Q5T5S1 534 aa16.98■□□□□ 0.31
PRDM16-203ENST00000378391 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
PRDM16-203ENST00000378391 SCAND2PQ9GZW5 306 aaPredicted RBP16.98■□□□□ 0.31
PRDM16-203ENST00000378391 CALCOCO1Q9P1Z2 691 aa16.98■□□□□ 0.31
PRDM16-203ENST00000378391 FSD2A1L4K1 749 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 UBXN4Q92575 508 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
PRDM16-203ENST00000378391 GLRX3O76003 335 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms