RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 RAD51AP2Q09MP3 1159 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 MEIS3Q99687 375 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 KRT24Q2M2I5 525 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 SYT10Q6XYQ8 523 aa12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-201ENST00000378387 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 VAMP4O75379 141 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 CWC27Q6UX04 472 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 LEKR1Q6ZMV7 388 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 DRC1Q96MC2 740 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 CBX8Q9HC52 389 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 F6X3S4 739 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 H3BQV1 296 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 CAPN2P17655 700 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 PDE1AP54750 535 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 IFFO2Q5TF58 517 aa12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 ZCCHC17Q9NP64 241 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-201ENST00000378387 ANKRD36BQ8N2N9 1353 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 FAM83GA6ND36 823 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 SNW1Q13573 536 aaKnown RBP12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 NUTM1Q86Y26 1132 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 C8orf58Q8NAV2 365 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 JPH4Q96JJ6 628 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 AK7Q96M32 723 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 SPG7Q9UQ90 795 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 ABCC11Q96J66 1382 aa12.46□□□□□ -0.42
ARHGEF39-201ENST00000378387 CCDC141Q6ZP82 1450 aa12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 ZSWIM4Q9H7M6 989 aa12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 TRIM66O15016 1216 aa12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 ERO1AQ96HE7 468 aa12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 SCAF11Q99590 1463 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 ABCC2Q92887 1545 aa12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 CCDC69A6NI79 296 aa12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 JAKMIP1Q96N16 626 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 DEF6Q9H4E7 631 aa12.45□□□□□ -0.42
ARHGEF39-201ENST00000378387 MINK1Q8N4C8 1332 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 GYS2P54840 703 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 TCEANC2Q96MN5 208 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 SECISBP2LQ93073 1101 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 MBIPQ9NS73 344 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 FEZ2Q9UHY8 353 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 LIMCH1Q9UPQ0 1083 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 LOC102724159A0A0B4J2E5 919 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 LIG1P18858 919 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 ZNF75DP51815 510 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 PWP2Q15269 919 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 TXLNBQ8N3L3 684 aa12.44□□□□□ -0.42
ARHGEF39-201ENST00000378387 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 A0A087WWV3 80 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 ANKRD65E5RJM6 399 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 AK2P54819 239 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 LRRCC1Q9C099 1032 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 SDF4Q9BRK5 362 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 TERF2IPQ9NYB0 399 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 IBSPP21815 317 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 ANKRD44Q8N8A2 993 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
ARHGEF39-201ENST00000378387 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
ARHGEF39-201ENST00000378387 SEC31AO94979 1220 aaKnown RBP12.42□□□□□ -0.42
ARHGEF39-201ENST00000378387 MLECQ14165 292 aa12.42□□□□□ -0.42
ARHGEF39-201ENST00000378387 HDGFL2Q7Z4V5 671 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF39-201ENST00000378387 PDRG1Q9NUG6 133 aa12.42□□□□□ -0.42
ARHGEF39-201ENST00000378387 CCDC171Q6TFL3 1326 aa12.42□□□□□ -0.42
ARHGEF39-201ENST00000378387 NPC1L1Q9UHC9 1359 aa12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 CEP85Q6P2H3 762 aa12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 ERCC4Q92889 916 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 PHACTR3Q96KR7 559 aa12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 E2F4Q16254 413 aa12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 PHF23Q9BUL5 403 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 PHACTR2O75167 634 aa12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 MCM6Q14566 821 aa12.41□□□□□ -0.42
ARHGEF39-201ENST00000378387 SURF6O75683 361 aaKnown RBP12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 DDX11Q96FC9 970 aa12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 CARMIL2Q6F5E8 1435 aa12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 GGT6Q6P531 493 aa12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 CCDC73Q6ZRK6 1079 aa12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 CCDC144CPQ8IYA2 1237 aa12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 WDR62O43379 1518 aa12.4□□□□□ -0.42
ARHGEF39-201ENST00000378387 MYO1CO00159 1063 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms