RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 SLC15A2Q16348 729 aa29.13■■■□□ 2.25
GFRA3-202ENST00000378362 SLC52A2Q9HAB3 445 aa29.13■■■□□ 2.25
GFRA3-202ENST00000378362 STK32BQ9NY57 414 aa29.13■■■□□ 2.25
GFRA3-202ENST00000378362 RBM42Q9BTD8 480 aaKnown RBP29.12■■■□□ 2.25
GFRA3-202ENST00000378362 PTCD1O75127 700 aaKnown RBP29.11■■■□□ 2.25
GFRA3-202ENST00000378362 MCM10Q7L590 875 aa29.11■■■□□ 2.25
GFRA3-202ENST00000378362 SMARCC1Q92922 1105 aaPredicted RBP29.11■■■□□ 2.25
GFRA3-202ENST00000378362 ADAMTS8Q9UP79 889 aa29.11■■■□□ 2.25
GFRA3-202ENST00000378362 LOC102724428A0A0B4J2F2 783 aa29.1■■■□□ 2.25
GFRA3-202ENST00000378362 SIK1P57059 783 aa29.1■■■□□ 2.25
GFRA3-202ENST00000378362 SMIM5Q71RC9 77 aa29.1■■■□□ 2.25
GFRA3-202ENST00000378362 SLC4A9Q96Q91 983 aa29.1■■■□□ 2.25
GFRA3-202ENST00000378362 WDR43Q15061 677 aaKnown RBP eCLIP29.09■■■□□ 2.25
GFRA3-202ENST00000378362 ATP6V1AP38606 617 aa29.08■■■□□ 2.25
GFRA3-202ENST00000378362 ITPK1Q13572 414 aa29.08■■■□□ 2.25
GFRA3-202ENST00000378362 PAPPAQ13219 1627 aa29.07■■■□□ 2.24
GFRA3-202ENST00000378362 AKT1S1Q96B36 256 aa29.07■■■□□ 2.24
GFRA3-202ENST00000378362 SENP3-EIF4A1A0A087X0R7 540 aa29.06■■■□□ 2.24
GFRA3-202ENST00000378362 NEFMP07197 916 aa29.06■■■□□ 2.24
GFRA3-202ENST00000378362 RRP7AQ9Y3A4 280 aaKnown RBP29.06■■■□□ 2.24
GFRA3-202ENST00000378362 LINC00116Q8NCU8 138 aa29.05■■■□□ 2.24
GFRA3-202ENST00000378362 TFCP2L1Q9NZI6 479 aa29.05■■■□□ 2.24
GFRA3-202ENST00000378362 MAPK8IP3Q9UPT6 1336 aa29.05■■■□□ 2.24
GFRA3-202ENST00000378362 DLG5Q8TDM6 1919 aa29.04■■■□□ 2.24
GFRA3-202ENST00000378362 TEFQ10587 303 aa29.04■■■□□ 2.24
GFRA3-202ENST00000378362 RTF1Q92541 710 aaKnown RBP29.04■■■□□ 2.24
GFRA3-202ENST00000378362 THUMPD2Q9BTF0 503 aaKnown RBP29.04■■■□□ 2.24
GFRA3-202ENST00000378362 NEUROD2Q15784 382 aa29.03■■■□□ 2.24
GFRA3-202ENST00000378362 AMIGO3Q86WK7 504 aa29.03■■■□□ 2.24
GFRA3-202ENST00000378362 TAF1LQ8IZX4 1826 aa29.02■■■□□ 2.24
GFRA3-202ENST00000378362 ZBTB7AO95365 584 aa29.02■■■□□ 2.24
GFRA3-202ENST00000378362 ADAMTS7Q9UKP4 1686 aa29.02■■■□□ 2.24
GFRA3-202ENST00000378362 NFE2L2Q16236 605 aa29.01■■■□□ 2.24
GFRA3-202ENST00000378362 C5P01031 1676 aa29.01■■■□□ 2.23
GFRA3-202ENST00000378362 MRS2Q9HD23 443 aa29■■■□□ 2.23
GFRA3-202ENST00000378362 MRC1P22897 1456 aa28.99■■■□□ 2.23
GFRA3-202ENST00000378362 KCNQ3O43525 872 aa28.99■■■□□ 2.23
GFRA3-202ENST00000378362 CEMIPQ8WUJ3 1361 aa28.99■■■□□ 2.23
GFRA3-202ENST00000378362 TUBGCP6Q96RT7 1819 aa28.99■■■□□ 2.23
GFRA3-202ENST00000378362 PNNQ9H307 717 aaKnown RBP28.99■■■□□ 2.23
GFRA3-202ENST00000378362 MIS18AQ9NYP9 233 aa28.99■■■□□ 2.23
GFRA3-202ENST00000378362 PNPLA7Q6ZV29 1317 aa28.98■■■□□ 2.23
GFRA3-202ENST00000378362 ATF5Q9Y2D1 282 aaPredicted RBP28.98■■■□□ 2.23
GFRA3-202ENST00000378362 RIPK4P57078 832 aa28.97■■■□□ 2.23
GFRA3-202ENST00000378362 PHF14O94880 888 aa28.97■■■□□ 2.23
GFRA3-202ENST00000378362 MSH5O43196 834 aa28.96■■■□□ 2.23
GFRA3-202ENST00000378362 TMPOP42166 694 aaKnown RBP28.95■■■□□ 2.23
GFRA3-202ENST00000378362 AK7Q96M32 723 aa28.95■■■□□ 2.23
GFRA3-202ENST00000378362 C4BP0C0L5 1744 aa28.95■■■□□ 2.22
GFRA3-202ENST00000378362 BTBD11A6QL63 1104 aa28.94■■■□□ 2.22
GFRA3-202ENST00000378362 RUNDC1Q96C34 613 aa28.94■■■□□ 2.22
GFRA3-202ENST00000378362 GOLGB1Q14789 3259 aaKnown RBP28.93■■■□□ 2.22
GFRA3-202ENST00000378362 SIPA1L3O60292 1781 aaPredicted RBP28.93■■■□□ 2.22
GFRA3-202ENST00000378362 COL23A1Q86Y22 540 aaPredicted RBP28.93■■■□□ 2.22
GFRA3-202ENST00000378362 DNAJC10Q8IXB1 793 aa28.93■■■□□ 2.22
GFRA3-202ENST00000378362 CASZ1Q86V15 1759 aa28.93■■■□□ 2.22
GFRA3-202ENST00000378362 ZNF790Q6PG37 636 aa28.92■■■□□ 2.22
GFRA3-202ENST00000378362 TTC5Q8N0Z6 440 aa28.92■■■□□ 2.22
GFRA3-202ENST00000378362 GNPATO15228 680 aa28.92■■■□□ 2.22
GFRA3-202ENST00000378362 ZNF496Q96IT1 587 aaPredicted RBP28.92■■■□□ 2.22
GFRA3-202ENST00000378362 MYH14Q7Z406 1995 aaKnown RBP28.91■■■□□ 2.22
GFRA3-202ENST00000378362 HTATSF1O43719 755 aaKnown RBP28.91■■■□□ 2.22
GFRA3-202ENST00000378362 PNISRQ8TF01 805 aaKnown RBP28.91■■■□□ 2.22
GFRA3-202ENST00000378362 KCPQ6ZWJ8 1503 aa28.9■■■□□ 2.22
GFRA3-202ENST00000378362 APAF1O14727 1248 aa28.89■■■□□ 2.22
GFRA3-202ENST00000378362 UTRNP46939 3433 aa28.89■■■□□ 2.21
GFRA3-202ENST00000378362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.87■■■□□ 2.21
GFRA3-202ENST00000378362 SPON1Q9HCB6 807 aa28.87■■■□□ 2.21
GFRA3-202ENST00000378362 CRKLP46109 303 aaKnown RBP28.87■■■□□ 2.21
GFRA3-202ENST00000378362 TAF7Q15545 349 aaPredicted RBP28.87■■■□□ 2.21
GFRA3-202ENST00000378362 MSL1Q68DK7 614 aa28.87■■■□□ 2.21
GFRA3-202ENST00000378362 PRAMEF22A3QJZ6 481 aa28.86■■■□□ 2.21
GFRA3-202ENST00000378362 UBR3Q6ZT12 1888 aa28.86■■■□□ 2.21
GFRA3-202ENST00000378362 TJP1Q07157 1748 aa28.86■■■□□ 2.21
GFRA3-202ENST00000378362 TRIM35Q9UPQ4 493 aa28.85■■■□□ 2.21
GFRA3-202ENST00000378362 COL5A3P25940 1745 aaPredicted RBP28.84■■■□□ 2.21
GFRA3-202ENST00000378362 FAM9BQ8IZU0 186 aa28.84■■■□□ 2.21
GFRA3-202ENST00000378362 UBR2Q8IWV8 1755 aa28.84■■■□□ 2.21
GFRA3-202ENST00000378362 MTFR1LQ9H019 292 aa28.83■■■□□ 2.21
GFRA3-202ENST00000378362 CYP19A1P11511 503 aaPredicted RBP28.82■■■□□ 2.2
GFRA3-202ENST00000378362 PTGER2P43116 358 aa28.82■■■□□ 2.2
GFRA3-202ENST00000378362 INTS5Q6P9B9 1019 aaKnown RBP28.82■■■□□ 2.2
GFRA3-202ENST00000378362 FMNL2Q96PY5 1086 aa28.81■■■□□ 2.2
GFRA3-202ENST00000378362 RTCBQ9Y3I0 505 aaKnown RBP28.8■■■□□ 2.2
GFRA3-202ENST00000378362 HEG1Q9ULI3 1381 aa28.8■■■□□ 2.2
GFRA3-202ENST00000378362 ZNF831Q5JPB2 1677 aa28.8■■■□□ 2.2
GFRA3-202ENST00000378362 QSER1Q2KHR3 1735 aa28.8■■■□□ 2.2
GFRA3-202ENST00000378362 CNTNAP4Q9C0A0 1308 aa28.79■■■□□ 2.2
GFRA3-202ENST00000378362 LAS1LQ9Y4W2 734 aaKnown RBP28.79■■■□□ 2.2
GFRA3-202ENST00000378362 PIP4K2AP48426 406 aaPredicted RBP28.78■■■□□ 2.2
GFRA3-202ENST00000378362 RC3H1Q5TC82 1133 aaKnown RBP28.78■■■□□ 2.2
GFRA3-202ENST00000378362 ZBTB1Q9Y2K1 713 aa28.78■■■□□ 2.2
GFRA3-202ENST00000378362 SALL2Q9Y467 1007 aaPredicted RBP28.78■■■□□ 2.2
GFRA3-202ENST00000378362 SSFA2P28290 1259 aa28.78■■■□□ 2.2
GFRA3-202ENST00000378362 ARHGEF1Q92888 912 aaKnown RBP28.78■■■□□ 2.2
GFRA3-202ENST00000378362 PPP1R1BQ9UD71 204 aaPredicted RBP28.78■■■□□ 2.2
GFRA3-202ENST00000378362 USP16Q9Y5T5 823 aa28.78■■■□□ 2.2
GFRA3-202ENST00000378362 LRP5O75197 1615 aa28.77■■■□□ 2.2
GFRA3-202ENST00000378362 RPS6KA4O75676 772 aa28.77■■■□□ 2.2
GFRA3-202ENST00000378362 CANXP27824 592 aaKnown RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms