RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 SLC52A2Q9HAB3 445 aa27.3■■□□□ 1.96
TRIM13-203ENST00000378183 C5P01031 1676 aa27.29■■□□□ 1.96
TRIM13-203ENST00000378183 SIPA1L3O60292 1781 aaPredicted RBP27.29■■□□□ 1.96
TRIM13-203ENST00000378183 SLC15A2Q16348 729 aa27.27■■□□□ 1.96
TRIM13-203ENST00000378183 ZNF827Q17R98 1081 aa27.27■■□□□ 1.96
TRIM13-203ENST00000378183 AKT1S1Q96B36 256 aa27.26■■□□□ 1.95
TRIM13-203ENST00000378183 PNNQ9H307 717 aaKnown RBP27.26■■□□□ 1.95
TRIM13-203ENST00000378183 STK32BQ9NY57 414 aa27.26■■□□□ 1.95
TRIM13-203ENST00000378183 TUBGCP6Q96RT7 1819 aa27.25■■□□□ 1.95
TRIM13-203ENST00000378183 LOC102724428A0A0B4J2F2 783 aa27.25■■□□□ 1.95
TRIM13-203ENST00000378183 SIK1P57059 783 aa27.25■■□□□ 1.95
TRIM13-203ENST00000378183 ADAMTS8Q9UP79 889 aa27.25■■□□□ 1.95
TRIM13-203ENST00000378183 CEMIPQ8WUJ3 1361 aa27.24■■□□□ 1.95
TRIM13-203ENST00000378183 WDR43Q15061 677 aaKnown RBP eCLIP27.24■■□□□ 1.95
TRIM13-203ENST00000378183 CASZ1Q86V15 1759 aa27.24■■□□□ 1.95
TRIM13-203ENST00000378183 ZNF831Q5JPB2 1677 aa27.24■■□□□ 1.95
TRIM13-203ENST00000378183 SLC4A9Q96Q91 983 aa27.23■■□□□ 1.95
TRIM13-203ENST00000378183 QSER1Q2KHR3 1735 aa27.22■■□□□ 1.95
TRIM13-203ENST00000378183 NEFMP07197 916 aa27.22■■□□□ 1.95
TRIM13-203ENST00000378183 MAPK8IP3Q9UPT6 1336 aa27.21■■□□□ 1.95
TRIM13-203ENST00000378183 ITPK1Q13572 414 aa27.21■■□□□ 1.95
TRIM13-203ENST00000378183 NFE2L2Q16236 605 aa27.21■■□□□ 1.95
TRIM13-203ENST00000378183 MCM10Q7L590 875 aa27.21■■□□□ 1.95
TRIM13-203ENST00000378183 CCDC146Q8IYE0 955 aa27.21■■□□□ 1.95
TRIM13-203ENST00000378183 PDGFDQ9GZP0 370 aaPredicted RBP27.21■■□□□ 1.95
TRIM13-203ENST00000378183 C4BP0C0L5 1744 aa27.21■■□□□ 1.95
TRIM13-203ENST00000378183 HTATSF1O43719 755 aaKnown RBP27.2■■□□□ 1.94
TRIM13-203ENST00000378183 SLC39A6Q13433 755 aa27.2■■□□□ 1.94
TRIM13-203ENST00000378183 DCTN1Q14203 1278 aa27.2■■□□□ 1.94
TRIM13-203ENST00000378183 ATP6V1AP38606 617 aa27.19■■□□□ 1.94
TRIM13-203ENST00000378183 RBM42Q9BTD8 480 aaKnown RBP27.19■■□□□ 1.94
TRIM13-203ENST00000378183 UBR2Q8IWV8 1755 aa27.19■■□□□ 1.94
TRIM13-203ENST00000378183 TEFQ10587 303 aa27.18■■□□□ 1.94
TRIM13-203ENST00000378183 LINC00116Q8NCU8 138 aa27.18■■□□□ 1.94
TRIM13-203ENST00000378183 RTF1Q92541 710 aaKnown RBP27.18■■□□□ 1.94
TRIM13-203ENST00000378183 COL5A3P25940 1745 aaPredicted RBP27.18■■□□□ 1.94
TRIM13-203ENST00000378183 KCPQ6ZWJ8 1503 aa27.17■■□□□ 1.94
TRIM13-203ENST00000378183 TJP1Q07157 1748 aa27.17■■□□□ 1.94
TRIM13-203ENST00000378183 PTCD1O75127 700 aaKnown RBP27.17■■□□□ 1.94
TRIM13-203ENST00000378183 RUNDC1Q96C34 613 aa27.16■■□□□ 1.94
TRIM13-203ENST00000378183 CICQ96RK0 1608 aaPredicted RBP27.16■■□□□ 1.94
TRIM13-203ENST00000378183 UBR3Q6ZT12 1888 aa27.15■■□□□ 1.94
TRIM13-203ENST00000378183 TMPOP42166 694 aaKnown RBP27.14■■□□□ 1.94
TRIM13-203ENST00000378183 MRS2Q9HD23 443 aa27.14■■□□□ 1.94
TRIM13-203ENST00000378183 TFCP2L1Q9NZI6 479 aa27.14■■□□□ 1.94
TRIM13-203ENST00000378183 PNPLA7Q6ZV29 1317 aa27.14■■□□□ 1.93
TRIM13-203ENST00000378183 PNISRQ8TF01 805 aaKnown RBP27.13■■□□□ 1.93
TRIM13-203ENST00000378183 RIPK4P57078 832 aa27.12■■□□□ 1.93
TRIM13-203ENST00000378183 LRP5O75197 1615 aa27.12■■□□□ 1.93
TRIM13-203ENST00000378183 MYH14Q7Z406 1995 aaKnown RBP27.11■■□□□ 1.93
TRIM13-203ENST00000378183 HMGB2P26583 209 aaKnown RBP27.11■■□□□ 1.93
TRIM13-203ENST00000378183 AMIGO3Q86WK7 504 aa27.11■■□□□ 1.93
TRIM13-203ENST00000378183 THUMPD2Q9BTF0 503 aaKnown RBP27.11■■□□□ 1.93
TRIM13-203ENST00000378183 RRP7AQ9Y3A4 280 aaKnown RBP27.11■■□□□ 1.93
TRIM13-203ENST00000378183 KCNQ3O43525 872 aa27.1■■□□□ 1.93
TRIM13-203ENST00000378183 ZNF790Q6PG37 636 aa27.1■■□□□ 1.93
TRIM13-203ENST00000378183 BTBD11A6QL63 1104 aa27.09■■□□□ 1.93
TRIM13-203ENST00000378183 SMIM5Q71RC9 77 aa27.08■■□□□ 1.93
TRIM13-203ENST00000378183 AK7Q96M32 723 aa27.08■■□□□ 1.93
TRIM13-203ENST00000378183 SRCAPQ6ZRS2 3230 aa27.08■■□□□ 1.93
TRIM13-203ENST00000378183 COL23A1Q86Y22 540 aaPredicted RBP27.07■■□□□ 1.92
TRIM13-203ENST00000378183 TTC5Q8N0Z6 440 aa27.07■■□□□ 1.92
TRIM13-203ENST00000378183 ZNF496Q96IT1 587 aaPredicted RBP27.07■■□□□ 1.92
TRIM13-203ENST00000378183 ZBTB7AO95365 584 aa27.06■■□□□ 1.92
TRIM13-203ENST00000378183 TAF7Q15545 349 aaPredicted RBP27.06■■□□□ 1.92
TRIM13-203ENST00000378183 NEUROD2Q15784 382 aa27.06■■□□□ 1.92
TRIM13-203ENST00000378183 DNAJC10Q8IXB1 793 aa27.06■■□□□ 1.92
TRIM13-203ENST00000378183 KDM3BQ7LBC6 1761 aa27.06■■□□□ 1.92
TRIM13-203ENST00000378183 TRIM35Q9UPQ4 493 aa27.05■■□□□ 1.92
TRIM13-203ENST00000378183 RC3H1Q5TC82 1133 aaKnown RBP27.04■■□□□ 1.92
TRIM13-203ENST00000378183 VSIG10Q8N0Z9 540 aa27.04■■□□□ 1.92
TRIM13-203ENST00000378183 MIS18AQ9NYP9 233 aa27.04■■□□□ 1.92
TRIM13-203ENST00000378183 CNTNAP4Q9C0A0 1308 aa27.04■■□□□ 1.92
TRIM13-203ENST00000378183 APAF1O14727 1248 aa27.03■■□□□ 1.92
TRIM13-203ENST00000378183 GNPATO15228 680 aa27.03■■□□□ 1.92
TRIM13-203ENST00000378183 COL24A1Q17RW2 1714 aa27.03■■□□□ 1.92
TRIM13-203ENST00000378183 HEG1Q9ULI3 1381 aa27.03■■□□□ 1.92
TRIM13-203ENST00000378183 SPON1Q9HCB6 807 aa27.02■■□□□ 1.92
TRIM13-203ENST00000378183 ATF5Q9Y2D1 282 aaPredicted RBP27.02■■□□□ 1.92
TRIM13-203ENST00000378183 CYP19A1P11511 503 aaPredicted RBP27.01■■□□□ 1.91
TRIM13-203ENST00000378183 CRKLP46109 303 aaKnown RBP27.01■■□□□ 1.91
TRIM13-203ENST00000378183 LMOD3Q0VAK6 560 aa27.01■■□□□ 1.91
TRIM13-203ENST00000378183 MTFR1LQ9H019 292 aa27.01■■□□□ 1.91
TRIM13-203ENST00000378183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27■■□□□ 1.91
TRIM13-203ENST00000378183 PHF14O94880 888 aa27■■□□□ 1.91
TRIM13-203ENST00000378183 SSFA2P28290 1259 aa27■■□□□ 1.91
TRIM13-203ENST00000378183 INTS5Q6P9B9 1019 aaKnown RBP27■■□□□ 1.91
TRIM13-203ENST00000378183 FLAD1Q8NFF5 587 aa27■■□□□ 1.91
TRIM13-203ENST00000378183 FMNL2Q96PY5 1086 aa27■■□□□ 1.91
TRIM13-203ENST00000378183 SLC16A10Q8TF71 515 aa26.99■■□□□ 1.91
TRIM13-203ENST00000378183 MSH5O43196 834 aa26.98■■□□□ 1.91
TRIM13-203ENST00000378183 RPS6KA4O75676 772 aa26.98■■□□□ 1.91
TRIM13-203ENST00000378183 PTGER2P43116 358 aa26.98■■□□□ 1.91
TRIM13-203ENST00000378183 SGIP1Q9BQI5 828 aa26.97■■□□□ 1.91
TRIM13-203ENST00000378183 RTCBQ9Y3I0 505 aaKnown RBP26.97■■□□□ 1.91
TRIM13-203ENST00000378183 CCDC87Q9NVE4 849 aa26.96■■□□□ 1.91
TRIM13-203ENST00000378183 C4AP0C0L4 1744 aa26.96■■□□□ 1.91
TRIM13-203ENST00000378183 PRAMEF22A3QJZ6 481 aa26.95■■□□□ 1.9
TRIM13-203ENST00000378183 SENP3-EIF4A1A0A087X0R7 540 aa26.93■■□□□ 1.9
TRIM13-203ENST00000378183 TRAPPC3LQ5T215 181 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms