RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TOMM22Q9NS69 142 aa10□□□□□ -0.81
CKAP2-203ENST00000378037 NEXNQ0ZGT2 675 aa9.99□□□□□ -0.81
CKAP2-203ENST00000378037 MPNDQ8N594 471 aa9.99□□□□□ -0.81
CKAP2-203ENST00000378037 ZNF335Q9H4Z2 1342 aaPredicted RBP9.99□□□□□ -0.81
CKAP2-203ENST00000378037 POLR3AO14802 1390 aaPredicted RBP9.99□□□□□ -0.81
CKAP2-203ENST00000378037 KIAA1211Q6ZU35 1233 aa9.99□□□□□ -0.81
CKAP2-203ENST00000378037 MYD88Q99836 296 aa9.99□□□□□ -0.81
CKAP2-203ENST00000378037 AXIN2Q9Y2T1 843 aa9.99□□□□□ -0.81
CKAP2-203ENST00000378037 TBX22Q9Y458 520 aa9.99□□□□□ -0.81
CKAP2-203ENST00000378037 AHDC1Q5TGY3 1603 aaPredicted RBP9.98□□□□□ -0.81
CKAP2-203ENST00000378037 TCEANC2Q96MN5 208 aa9.98□□□□□ -0.81
CKAP2-203ENST00000378037 SRCIN1Q9C0H9 1055 aa9.98□□□□□ -0.81
CKAP2-203ENST00000378037 MTMR7Q9Y216 660 aa9.98□□□□□ -0.81
CKAP2-203ENST00000378037 IFIT2P09913 472 aaKnown RBP9.98□□□□□ -0.81
CKAP2-203ENST00000378037 MEX3CQ5U5Q3 659 aaKnown RBP9.98□□□□□ -0.81
CKAP2-203ENST00000378037 IFT57Q9NWB7 429 aa9.98□□□□□ -0.81
CKAP2-203ENST00000378037 MARF1Q9Y4F3 1742 aaKnown RBP9.98□□□□□ -0.81
CKAP2-203ENST00000378037 MST1RQ04912 1400 aa9.98□□□□□ -0.81
CKAP2-203ENST00000378037 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 CWC27Q6UX04 472 aaKnown RBP9.97□□□□□ -0.81
CKAP2-203ENST00000378037 SMIM5Q71RC9 77 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 IL17REQ8NFR9 667 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 ISY1Q9ULR0 285 aaKnown RBP9.97□□□□□ -0.81
CKAP2-203ENST00000378037 DCCP43146 1447 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 GNAI2P04899 355 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 MAP3K2Q9Y2U5 619 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 UBE3BQ7Z3V4 1068 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 NALCNQ8IZF0 1738 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 LRRC7Q96NW7 1537 aa9.97□□□□□ -0.81
CKAP2-203ENST00000378037 KIF1AQ12756 1690 aa9.96□□□□□ -0.81
CKAP2-203ENST00000378037 PLEKHF1Q96S99 279 aa9.96□□□□□ -0.81
CKAP2-203ENST00000378037 SNRKQ9NRH2 765 aa9.96□□□□□ -0.81
CKAP2-203ENST00000378037 CDC42BPGQ6DT37 1551 aa9.96□□□□□ -0.81
CKAP2-203ENST00000378037 FMN2Q9NZ56 1722 aa9.96□□□□□ -0.81
CKAP2-203ENST00000378037 MRPL50Q8N5N7 158 aaKnown RBP9.96□□□□□ -0.81
CKAP2-203ENST00000378037 BOLA2Q9H3K6 86 aa9.96□□□□□ -0.81
CKAP2-203ENST00000378037 C19orf44Q9H6X5 657 aa9.96□□□□□ -0.81
CKAP2-203ENST00000378037 PROSER3Q2NL68 480 aa9.96□□□□□ -0.82
CKAP2-203ENST00000378037 SLC4A8Q2Y0W8 1093 aa9.96□□□□□ -0.82
CKAP2-203ENST00000378037 ABCC11Q96J66 1382 aa9.96□□□□□ -0.82
CKAP2-203ENST00000378037 G3BP1Q13283 466 aaKnown RBP eCLIP9.95□□□□□ -0.82
CKAP2-203ENST00000378037 COPS6Q7L5N1 327 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 SPG7Q9UQ90 795 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.95□□□□□ -0.82
CKAP2-203ENST00000378037 NEK4P51957 841 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 C8orf34Q49A92 452 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 HSP90AB3PQ58FF7 597 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 C8orf37Q96NL8 207 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 CHMP4BQ9H444 224 aaKnown RBP9.95□□□□□ -0.82
CKAP2-203ENST00000378037 IQSEC3Q9UPP2 1182 aaPredicted RBP9.95□□□□□ -0.82
CKAP2-203ENST00000378037 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 PPP1R42Q7Z4L9 355 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 DIAPH3Q9NSV4 1193 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 BTG4Q9NY30 223 aa9.95□□□□□ -0.82
CKAP2-203ENST00000378037 NBPF7P0C2Y1 421 aaPredicted RBP9.94□□□□□ -0.82
CKAP2-203ENST00000378037 STK3Q13188 491 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 AACSQ86V21 672 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 PTCH1Q13635 1447 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 ARHGEF28Q8N1W1 1705 aaKnown RBP9.94□□□□□ -0.82
CKAP2-203ENST00000378037 XAGE3Q8WTP9 111 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 FBXW7Q969H0 707 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 NGLY1Q96IV0 654 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 CHAMP1Q96JM3 812 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 PNMA6EA0A0J9YXQ4 647 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 A1BGP04217 495 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 APPP05067 770 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 KCNH5Q8NCM2 988 aa9.94□□□□□ -0.82
CKAP2-203ENST00000378037 PLEKHG1Q9ULL1 1385 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 ITSN1Q15811 1721 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 HSP90B1P14625 803 aaKnown RBP9.93□□□□□ -0.82
CKAP2-203ENST00000378037 RAB11FIP4Q86YS3 637 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 SBNO2Q9Y2G9 1366 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
CKAP2-203ENST00000378037 ABCA3Q99758 1704 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 TMEM94Q12767 1356 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 TRPM1Q7Z4N2 1603 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 ARID3AQ99856 593 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
CKAP2-203ENST00000378037 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
CKAP2-203ENST00000378037 ADGRB1O14514 1584 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 PHF14O94880 888 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 JAG2Q9Y219 1238 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 A0A087WZG4 1122 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 UBAP1LF5GYI3 381 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 CPA1P15085 419 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
CKAP2-203ENST00000378037 FSD1Q9BTV5 496 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 ZNF521Q96K83 1311 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 DDX58O95786 925 aaKnown RBP9.92□□□□□ -0.82
CKAP2-203ENST00000378037 CLASRPQ8N2M8 674 aaKnown RBP9.92□□□□□ -0.82
CKAP2-203ENST00000378037 HELBQ8NG08 1087 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-203ENST00000378037 DNAAF4Q8WXU2 420 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 LRRCC1Q9C099 1032 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 ZBTB40Q9NUA8 1239 aa9.92□□□□□ -0.82
CKAP2-203ENST00000378037 FLT4P35916 1363 aa9.91□□□□□ -0.82
CKAP2-203ENST00000378037 USP19O94966 1318 aa9.91□□□□□ -0.82
CKAP2-203ENST00000378037 WASHC4Q2M389 1173 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms