RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 IL13P35225 146 aa11.97□□□□□ -0.49
RNF38-206ENST00000377885 TTC12Q9H892 705 aaPredicted RBP11.97□□□□□ -0.49
RNF38-206ENST00000377885 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
RNF38-206ENST00000377885 GLI2P10070 1586 aa11.97□□□□□ -0.49
RNF38-206ENST00000377885 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
RNF38-206ENST00000377885 HSP90AB4PQ58FF6 505 aa11.97□□□□□ -0.49
RNF38-206ENST00000377885 STX6O43752 255 aa11.97□□□□□ -0.49
RNF38-206ENST00000377885 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
RNF38-206ENST00000377885 GTPBP4Q9BZE4 634 aaKnown RBP11.97□□□□□ -0.49
RNF38-206ENST00000377885 CHMP3Q9Y3E7 222 aa11.97□□□□□ -0.49
RNF38-206ENST00000377885 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
RNF38-206ENST00000377885 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.49
RNF38-206ENST00000377885 LIMCH1Q9UPQ0 1083 aa11.96□□□□□ -0.49
RNF38-206ENST00000377885 VWDEQ8N2E2 1590 aa11.96□□□□□ -0.49
RNF38-206ENST00000377885 YTHDC2Q9H6S0 1430 aaKnown RBP11.96□□□□□ -0.5
RNF38-206ENST00000377885 PNPLA6Q8IY17 1366 aa11.96□□□□□ -0.5
RNF38-206ENST00000377885 GOLGA6L19H0YKK7 550 aa11.96□□□□□ -0.5
RNF38-206ENST00000377885 SURF6O75683 361 aaKnown RBP11.96□□□□□ -0.5
RNF38-206ENST00000377885 TSHZ3Q63HK5 1081 aa11.96□□□□□ -0.5
RNF38-206ENST00000377885 ZSCAN31Q96LW9 406 aaPredicted RBP11.96□□□□□ -0.5
RNF38-206ENST00000377885 CNPY2Q9Y2B0 182 aa11.96□□□□□ -0.5
RNF38-206ENST00000377885 F6X3S4 739 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 KDM4AO75164 1064 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 PDIA4P13667 645 aaKnown RBP11.95□□□□□ -0.5
RNF38-206ENST00000377885 CHMLP26374 656 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 ZDHHC9Q9Y397 364 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 CFAP65Q6ZU64 1925 aaKnown RBP11.95□□□□□ -0.5
RNF38-206ENST00000377885 RTL1A6NKG5 1358 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 CHAMP1Q96JM3 812 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 TRIM5Q9C035 493 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 HDAC5Q9UQL6 1122 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 PDCP20941 246 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 KRT85P78386 507 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 WAPLQ7Z5K2 1190 aa11.95□□□□□ -0.5
RNF38-206ENST00000377885 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
RNF38-206ENST00000377885 LMTK2Q8IWU2 1503 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 FGD1P98174 961 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 CUL4AQ13619 759 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
RNF38-206ENST00000377885 AMPHP49418 695 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 ZNF592Q92610 1267 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 CYP46A1Q9Y6A2 500 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 GADD45BO75293 160 aaPredicted RBP11.94□□□□□ -0.5
RNF38-206ENST00000377885 MAP3K11Q16584 847 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 OSBPL3Q9H4L5 887 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 RAB11FIP3O75154 756 aa11.94□□□□□ -0.5
RNF38-206ENST00000377885 TPD52L1Q16890 204 aaPredicted RBP11.94□□□□□ -0.5
RNF38-206ENST00000377885 LRRC7Q96NW7 1537 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 ADGRB1O14514 1584 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 IL1RAPL2Q9NP60 686 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 CCDC112Q8NEF3 446 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 BICD2Q8TD16 824 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 TNMDQ9H2S6 317 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 PDRG1Q9NUG6 133 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 PPRC1Q5VV67 1664 aaKnown RBP11.93□□□□□ -0.5
RNF38-206ENST00000377885 GIMAP6Q6P9H5 292 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 SH2B1Q9NRF2 756 aaPredicted RBP11.93□□□□□ -0.5
RNF38-206ENST00000377885 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
RNF38-206ENST00000377885 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
RNF38-206ENST00000377885 F13A1P00488 732 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 KRT24Q2M2I5 525 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 NUDT16Q96DE0 195 aaKnown RBP11.92□□□□□ -0.5
RNF38-206ENST00000377885 CASTP20810 708 aaKnown RBP11.92□□□□□ -0.5
RNF38-206ENST00000377885 PSMA5P28066 241 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 MIS18AQ9NYP9 233 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
RNF38-206ENST00000377885 COL3A1P02461 1466 aaPredicted RBP11.92□□□□□ -0.5
RNF38-206ENST00000377885 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 WASLO00401 505 aaPredicted RBP11.92□□□□□ -0.5
RNF38-206ENST00000377885 EPB41L2O43491 1005 aaKnown RBP11.92□□□□□ -0.5
RNF38-206ENST00000377885 RNF20Q5VTR2 975 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 MROH2AA6NES4 1674 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 CHL1O00533 1208 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
RNF38-206ENST00000377885 UTP14CQ5TAP6 766 aaKnown RBP11.92□□□□□ -0.5
RNF38-206ENST00000377885 BECN2A8MW95 431 aa11.91□□□□□ -0.5
RNF38-206ENST00000377885 MLECQ14165 292 aa11.91□□□□□ -0.5
RNF38-206ENST00000377885 LARP1BQ659C4 914 aaKnown RBP11.91□□□□□ -0.5
RNF38-206ENST00000377885 RGS12O14924 1447 aa11.91□□□□□ -0.5
RNF38-206ENST00000377885 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
RNF38-206ENST00000377885 CCDC83Q8IWF9 413 aa11.91□□□□□ -0.5
RNF38-206ENST00000377885 CWC27Q6UX04 472 aaKnown RBP11.91□□□□□ -0.5
RNF38-206ENST00000377885 JAKMIP1Q96N16 626 aaKnown RBP11.91□□□□□ -0.5
RNF38-206ENST00000377885 H3BQV1 296 aa11.91□□□□□ -0.5
RNF38-206ENST00000377885 IFFO2Q5TF58 517 aa11.91□□□□□ -0.5
RNF38-206ENST00000377885 LRRFIP2Q9Y608 721 aaKnown RBP11.91□□□□□ -0.5
RNF38-206ENST00000377885 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
RNF38-206ENST00000377885 PLPPR3Q6T4P5 718 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 GJB2P29033 226 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 DMTNQ08495 405 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 ARHGAP31Q2M1Z3 1444 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 FLIIQ13045 1269 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 CLASRPQ8N2M8 674 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms