RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 A0A1B0GUL7 405 aa19.45■□□□□ 0.7
ATXN2-201ENST00000377617 CWC27Q6UX04 472 aaKnown RBP19.45■□□□□ 0.7
ATXN2-201ENST00000377617 CCDC12Q8WUD4 166 aaPredicted RBP19.44■□□□□ 0.7
ATXN2-201ENST00000377617 CEP112Q8N8E3 955 aa19.44■□□□□ 0.7
ATXN2-201ENST00000377617 PLCD3Q8N3E9 789 aa19.44■□□□□ 0.7
ATXN2-201ENST00000377617 FKBP15Q5T1M5 1219 aa19.44■□□□□ 0.7
ATXN2-201ENST00000377617 EHBP1Q8NDI1 1231 aa19.44■□□□□ 0.7
ATXN2-201ENST00000377617 RRBP1Q9P2E9 1410 aaKnown RBP19.44■□□□□ 0.7
ATXN2-201ENST00000377617 SKILP12757 684 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 GBP6Q6ZN66 633 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 C10orf67Q8IYJ2 551 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 CCDC69A6NI79 296 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 BMP2KLQ5H9B9 411 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 BCCIPQ9P287 314 aaKnown RBP eCLIP19.43■□□□□ 0.7
ATXN2-201ENST00000377617 A0A1B0GUA9 196 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 HLTFQ14527 1009 aaKnown RBP eCLIP19.43■□□□□ 0.7
ATXN2-201ENST00000377617 CCDC158Q5M9N0 1113 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 C6orf163Q5TEZ5 329 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 FAM200AQ8TCP9 573 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 NACAP1Q9BZK3 213 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 AIMP1Q12904 312 aaKnown RBP19.43■□□□□ 0.7
ATXN2-201ENST00000377617 TMEM57Q8N5G2 664 aa19.43■□□□□ 0.7
ATXN2-201ENST00000377617 MCM6Q14566 821 aa19.42■□□□□ 0.7
ATXN2-201ENST00000377617 HSF2BPO75031 334 aa19.42■□□□□ 0.7
ATXN2-201ENST00000377617 VPS36Q86VN1 386 aa19.42■□□□□ 0.7
ATXN2-201ENST00000377617 ALS2CR12Q96Q35 445 aa19.42■□□□□ 0.7
ATXN2-201ENST00000377617 CCDC186Q7Z3E2 898 aa19.42■□□□□ 0.7
ATXN2-201ENST00000377617 OTUD6BQ8N6M0 293 aa19.42■□□□□ 0.7
ATXN2-201ENST00000377617 TAOK3Q9H2K8 898 aa19.42■□□□□ 0.7
ATXN2-201ENST00000377617 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
ATXN2-201ENST00000377617 CKAP4Q07065 602 aaKnown RBP19.42■□□□□ 0.7
ATXN2-201ENST00000377617 STX6O43752 255 aa19.41■□□□□ 0.7
ATXN2-201ENST00000377617 OPA1O60313 960 aa19.41■□□□□ 0.7
ATXN2-201ENST00000377617 MEX3CQ5U5Q3 659 aaKnown RBP19.41■□□□□ 0.7
ATXN2-201ENST00000377617 RBM27Q9P2N5 1060 aaKnown RBP19.41■□□□□ 0.7
ATXN2-201ENST00000377617 CTAGE15A4D2H0 777 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 CTAGE8P0CG41 777 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 CTAGE6Q86UF2 777 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 CTAGE4Q8IX94 777 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 TDRD9Q8NDG6 1382 aaKnown RBP19.4■□□□□ 0.7
ATXN2-201ENST00000377617 STAMBPO95630 424 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 FBF1Q8TES7 1133 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 GLRX3O76003 335 aaKnown RBP19.4■□□□□ 0.7
ATXN2-201ENST00000377617 CEP63Q96MT8 703 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 C20orf194Q5TEA3 1177 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 MAATS1Q7Z4T9 603 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 ZFP91Q96JP5 570 aaPredicted RBP19.4■□□□□ 0.7
ATXN2-201ENST00000377617 NUP88Q99567 741 aaPredicted RBP19.4■□□□□ 0.7
ATXN2-201ENST00000377617 CPSF2Q9P2I0 782 aaKnown RBP19.4■□□□□ 0.7
ATXN2-201ENST00000377617 CUX1P39880 1505 aa19.4■□□□□ 0.7
ATXN2-201ENST00000377617 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.7
ATXN2-201ENST00000377617 DNAI1Q9UI46 699 aa19.39■□□□□ 0.7
ATXN2-201ENST00000377617 ZSCAN25Q6NSZ9 544 aa19.39■□□□□ 0.69
ATXN2-201ENST00000377617 NBPF11Q86T75 865 aa19.39■□□□□ 0.69
ATXN2-201ENST00000377617 CEP57Q86XR8 500 aa19.39■□□□□ 0.69
ATXN2-201ENST00000377617 GDPD2Q9HCC8 539 aa19.39■□□□□ 0.69
ATXN2-201ENST00000377617 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.69
ATXN2-201ENST00000377617 MX1P20591 662 aa19.39■□□□□ 0.69
ATXN2-201ENST00000377617 GSTTP1A0A1W2PQM5 241 aa19.38■□□□□ 0.69
ATXN2-201ENST00000377617 FSIP1Q8NA03 581 aa19.38■□□□□ 0.69
ATXN2-201ENST00000377617 ZNF830Q96NB3 372 aaPredicted RBP19.38■□□□□ 0.69
ATXN2-201ENST00000377617 TTC12Q9H892 705 aaPredicted RBP19.38■□□□□ 0.69
ATXN2-201ENST00000377617 RARSP54136 660 aaKnown RBP19.38■□□□□ 0.69
ATXN2-201ENST00000377617 CACNA2D4Q7Z3S7 1137 aa19.38■□□□□ 0.69
ATXN2-201ENST00000377617 SKAP1Q86WV1 359 aa19.38■□□□□ 0.69
ATXN2-201ENST00000377617 RSRC1Q96IZ7 334 aaKnown RBP19.38■□□□□ 0.69
ATXN2-201ENST00000377617 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
ATXN2-201ENST00000377617 IGSF3O75054 1194 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 HDGFL1Q5TGJ6 251 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 PPM1EQ8WY54 764 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 NSRP1Q9H0G5 558 aaKnown RBP19.37■□□□□ 0.69
ATXN2-201ENST00000377617 SRGAP3O43295 1099 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 SNX21Q969T3 373 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 ZSWIM4Q9H7M6 989 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 SEPT11Q9NVA2 429 aaKnown RBP19.37■□□□□ 0.69
ATXN2-201ENST00000377617 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 FYB1O15117 783 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 FGFR1OPO95684 399 aaKnown RBP19.37■□□□□ 0.69
ATXN2-201ENST00000377617 MSL1Q68DK7 614 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 KLHL10Q6JEL2 608 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 ATRIPQ8WXE1 791 aa19.37■□□□□ 0.69
ATXN2-201ENST00000377617 NBPF8Q3BBV2 869 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 CCDC178Q5BJE1 867 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 GOLGA1Q92805 767 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 HMGB1P09429 215 aaKnown RBP19.36■□□□□ 0.69
ATXN2-201ENST00000377617 CCDC121Q6ZUS5 278 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 ARFGAP2Q8N6H7 521 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 ZHX3Q9H4I2 956 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 RRAGDQ9NQL2 400 aaPredicted RBP19.36■□□□□ 0.69
ATXN2-201ENST00000377617 RAB11FIP3O75154 756 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 MAP4K4O95819 1239 aaPredicted RBP19.36■□□□□ 0.69
ATXN2-201ENST00000377617 AACSQ86V21 672 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 ANKRD50Q9ULJ7 1429 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 LRRC9Q6ZRR7 1453 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 SARNPP82979 210 aaKnown RBP19.36■□□□□ 0.69
ATXN2-201ENST00000377617 CCDC6Q16204 474 aa19.36■□□□□ 0.69
ATXN2-201ENST00000377617 NKTRP30414 1462 aaKnown RBP19.36■□□□□ 0.69
ATXN2-201ENST00000377617 ALDH1L2Q3SY69 923 aa19.35■□□□□ 0.69
ATXN2-201ENST00000377617 KIF1BPQ96EK5 621 aa19.35■□□□□ 0.69
ATXN2-201ENST00000377617 U3KPZ7 1027 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms