RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 QSER1Q2KHR3 1735 aa29.49■■■□□ 2.31
SRM-201ENST00000376957 MSH5O43196 834 aa29.49■■■□□ 2.31
SRM-201ENST00000376957 FCHSD2O94868 740 aa29.49■■■□□ 2.31
SRM-201ENST00000376957 PDGFDQ9GZP0 370 aaPredicted RBP29.49■■■□□ 2.31
SRM-201ENST00000376957 ATF5Q9Y2D1 282 aaPredicted RBP29.49■■■□□ 2.31
SRM-201ENST00000376957 RBM42Q9BTD8 480 aaKnown RBP29.48■■■□□ 2.31
SRM-201ENST00000376957 PRKAR2BP31323 418 aa29.47■■■□□ 2.31
SRM-201ENST00000376957 SCN11AQ9UI33 1791 aa29.47■■■□□ 2.31
SRM-201ENST00000376957 GNAT3A8MTJ3 354 aa29.46■■■□□ 2.31
SRM-201ENST00000376957 PNNQ9H307 717 aaKnown RBP29.46■■■□□ 2.31
SRM-201ENST00000376957 PNPLA7Q6ZV29 1317 aa29.45■■■□□ 2.31
SRM-201ENST00000376957 RNMTO43148 476 aaKnown RBP29.45■■■□□ 2.31
SRM-201ENST00000376957 SLC52A2Q9HAB3 445 aa29.45■■■□□ 2.31
SRM-201ENST00000376957 TAF1LQ8IZX4 1826 aa29.45■■■□□ 2.3
SRM-201ENST00000376957 RSPH6AQ9H0K4 717 aa29.44■■■□□ 2.3
SRM-201ENST00000376957 POLD1P28340 1107 aa29.43■■■□□ 2.3
SRM-201ENST00000376957 LGR6Q9HBX8 967 aa29.43■■■□□ 2.3
SRM-201ENST00000376957 MAP3K5Q99683 1374 aa29.42■■■□□ 2.3
SRM-201ENST00000376957 C4BP0C0L5 1744 aa29.41■■■□□ 2.3
SRM-201ENST00000376957 TEFQ10587 303 aa29.41■■■□□ 2.3
SRM-201ENST00000376957 DCAF8L1A6NGE4 600 aa29.4■■■□□ 2.3
SRM-201ENST00000376957 PTCD1O75127 700 aaKnown RBP29.39■■■□□ 2.3
SRM-201ENST00000376957 RTF1Q92541 710 aaKnown RBP29.39■■■□□ 2.3
SRM-201ENST00000376957 MYBBP1AQ9BQG0 1328 aaKnown RBP29.39■■■□□ 2.3
SRM-201ENST00000376957 PTGER2P43116 358 aa29.38■■■□□ 2.29
SRM-201ENST00000376957 LINC00116Q8NCU8 138 aa29.38■■■□□ 2.29
SRM-201ENST00000376957 ZNF831Q5JPB2 1677 aa29.37■■■□□ 2.29
SRM-201ENST00000376957 SSFA2P28290 1259 aa29.37■■■□□ 2.29
SRM-201ENST00000376957 COL23A1Q86Y22 540 aaPredicted RBP29.37■■■□□ 2.29
SRM-201ENST00000376957 ITPK1Q13572 414 aa29.36■■■□□ 2.29
SRM-201ENST00000376957 TTC5Q8N0Z6 440 aa29.36■■■□□ 2.29
SRM-201ENST00000376957 PHACTR3Q96KR7 559 aa29.36■■■□□ 2.29
SRM-201ENST00000376957 VIRMAQ69YN4 1812 aaKnown RBP29.36■■■□□ 2.29
SRM-201ENST00000376957 TUBGCP6Q96RT7 1819 aa29.36■■■□□ 2.29
SRM-201ENST00000376957 GNPATO15228 680 aa29.35■■■□□ 2.29
SRM-201ENST00000376957 ARXQ96QS3 562 aa29.35■■■□□ 2.29
SRM-201ENST00000376957 PHF14O94880 888 aa29.34■■■□□ 2.29
SRM-201ENST00000376957 RC3H1Q5TC82 1133 aaKnown RBP29.34■■■□□ 2.29
SRM-201ENST00000376957 RTCBQ9Y3I0 505 aaKnown RBP29.34■■■□□ 2.29
SRM-201ENST00000376957 MRC1P22897 1456 aa29.34■■■□□ 2.29
SRM-201ENST00000376957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.33■■■□□ 2.29
SRM-201ENST00000376957 ADAMTS7Q9UKP4 1686 aa29.31■■■□□ 2.28
SRM-201ENST00000376957 CNTNAP4Q9C0A0 1308 aa29.31■■■□□ 2.28
SRM-201ENST00000376957 MAPK8IP3Q9UPT6 1336 aa29.31■■■□□ 2.28
SRM-201ENST00000376957 HTATSF1O43719 755 aaKnown RBP29.31■■■□□ 2.28
SRM-201ENST00000376957 SGIP1Q9BQI5 828 aa29.31■■■□□ 2.28
SRM-201ENST00000376957 ZNF316A6NFI3 1004 aaPredicted RBP29.3■■■□□ 2.28
SRM-201ENST00000376957 TRAPPC3LQ5T215 181 aa29.3■■■□□ 2.28
SRM-201ENST00000376957 IL17REQ8NFR9 667 aa29.3■■■□□ 2.28
SRM-201ENST00000376957 ADRA2BP18089 450 aa29.29■■■□□ 2.28
SRM-201ENST00000376957 UBR3Q6ZT12 1888 aa29.28■■■□□ 2.28
SRM-201ENST00000376957 SLC39A6Q13433 755 aa29.28■■■□□ 2.28
SRM-201ENST00000376957 SLC4A9Q96Q91 983 aa29.28■■■□□ 2.28
SRM-201ENST00000376957 VSIG10Q8N0Z9 540 aa29.27■■■□□ 2.28
SRM-201ENST00000376957 FHDC1Q9C0D6 1143 aaPredicted RBP29.26■■■□□ 2.27
SRM-201ENST00000376957 PRKRIP1Q9H875 184 aaPredicted RBP29.26■■■□□ 2.27
SRM-201ENST00000376957 CEMIPQ8WUJ3 1361 aa29.26■■■□□ 2.27
SRM-201ENST00000376957 RPS6KA4O75676 772 aa29.25■■■□□ 2.27
SRM-201ENST00000376957 WDR43Q15061 677 aaKnown RBP eCLIP29.25■■■□□ 2.27
SRM-201ENST00000376957 BTBD11A6QL63 1104 aa29.24■■■□□ 2.27
SRM-201ENST00000376957 RFC4P35249 363 aa29.24■■■□□ 2.27
SRM-201ENST00000376957 CRKLP46109 303 aaKnown RBP29.24■■■□□ 2.27
SRM-201ENST00000376957 ZNF790Q6PG37 636 aa29.24■■■□□ 2.27
SRM-201ENST00000376957 COL5A3P25940 1745 aaPredicted RBP29.23■■■□□ 2.27
SRM-201ENST00000376957 MSL1Q68DK7 614 aa29.23■■■□□ 2.27
SRM-201ENST00000376957 SYT17Q9BSW7 474 aa29.23■■■□□ 2.27
SRM-201ENST00000376957 TEX13AQ9BXU3 409 aaPredicted RBP29.23■■■□□ 2.27
SRM-201ENST00000376957 KLHL34Q8N239 644 aa29.22■■■□□ 2.27
SRM-201ENST00000376957 COL24A1Q17RW2 1714 aa29.22■■■□□ 2.27
SRM-201ENST00000376957 STARD3NLO95772 234 aa29.21■■■□□ 2.27
SRM-201ENST00000376957 PLEKHF1Q96S99 279 aa29.21■■■□□ 2.27
SRM-201ENST00000376957 CICQ96RK0 1608 aaPredicted RBP29.2■■■□□ 2.27
SRM-201ENST00000376957 MCM10Q7L590 875 aa29.2■■■□□ 2.26
SRM-201ENST00000376957 DNAJC10Q8IXB1 793 aa29.2■■■□□ 2.26
SRM-201ENST00000376957 FMNL2Q96PY5 1086 aa29.2■■■□□ 2.26
SRM-201ENST00000376957 NFE2L2Q16236 605 aa29.19■■■□□ 2.26
SRM-201ENST00000376957 CCDC87Q9NVE4 849 aa29.19■■■□□ 2.26
SRM-201ENST00000376957 AMIGO3Q86WK7 504 aa29.18■■■□□ 2.26
SRM-201ENST00000376957 NLGN1Q8N2Q7 840 aa29.18■■■□□ 2.26
SRM-201ENST00000376957 ARHGEF1Q92888 912 aaKnown RBP29.17■■■□□ 2.26
SRM-201ENST00000376957 KCPQ6ZWJ8 1503 aa29.16■■■□□ 2.26
SRM-201ENST00000376957 NPM2Q86SE8 214 aaKnown RBP29.16■■■□□ 2.26
SRM-201ENST00000376957 PNISRQ8TF01 805 aaKnown RBP29.16■■■□□ 2.26
SRM-201ENST00000376957 TJP1Q07157 1748 aa29.16■■■□□ 2.26
SRM-201ENST00000376957 SIPA1L3O60292 1781 aaPredicted RBP29.16■■■□□ 2.26
SRM-201ENST00000376957 CYP19A1P11511 503 aaPredicted RBP29.15■■■□□ 2.26
SRM-201ENST00000376957 LMOD3Q0VAK6 560 aa29.15■■■□□ 2.26
SRM-201ENST00000376957 TAF7Q15545 349 aaPredicted RBP29.15■■■□□ 2.26
SRM-201ENST00000376957 SMIM5Q71RC9 77 aa29.15■■■□□ 2.26
SRM-201ENST00000376957 UBR2Q8IWV8 1755 aa29.15■■■□□ 2.26
SRM-201ENST00000376957 HEG1Q9ULI3 1381 aa29.14■■■□□ 2.26
SRM-201ENST00000376957 ZNF496Q96IT1 587 aaPredicted RBP29.14■■■□□ 2.26
SRM-201ENST00000376957 DCTN1Q14203 1278 aa29.13■■■□□ 2.25
SRM-201ENST00000376957 INTS5Q6P9B9 1019 aaKnown RBP29.13■■■□□ 2.25
SRM-201ENST00000376957 ZPR1O75312 459 aa29.12■■■□□ 2.25
SRM-201ENST00000376957 MYH14Q7Z406 1995 aaKnown RBP29.12■■■□□ 2.25
SRM-201ENST00000376957 ANP32CO43423 234 aa29.1■■■□□ 2.25
SRM-201ENST00000376957 RIPK4P57078 832 aa29.1■■■□□ 2.25
SRM-201ENST00000376957 CD2APQ9Y5K6 639 aa29.1■■■□□ 2.25
SRM-201ENST00000376957 RUNDC1Q96C34 613 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms