RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-202ENST00000376839 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
ACTN1-202ENST00000376839 UBR1Q8IWV7 1749 aa16.19■□□□□ 0.18
ACTN1-202ENST00000376839 NEK4P51957 841 aa16.18■□□□□ 0.18
ACTN1-202ENST00000376839 EYA1Q99502 592 aa16.18■□□□□ 0.18
ACTN1-202ENST00000376839 RBSNQ9H1K0 784 aa16.18■□□□□ 0.18
ACTN1-202ENST00000376839 PALD1Q9ULE6 856 aa16.18■□□□□ 0.18
ACTN1-202ENST00000376839 FMN2Q9NZ56 1722 aa16.18■□□□□ 0.18
ACTN1-202ENST00000376839 TMX3Q96JJ7 454 aa16.18■□□□□ 0.18
ACTN1-202ENST00000376839 ESYT1Q9BSJ8 1104 aa16.18■□□□□ 0.18
ACTN1-202ENST00000376839 KDRP35968 1356 aa16.18■□□□□ 0.18
ACTN1-202ENST00000376839 FLIIQ13045 1269 aa16.17■□□□□ 0.18
ACTN1-202ENST00000376839 SLC26A8Q96RN1 970 aa16.17■□□□□ 0.18
ACTN1-202ENST00000376839 STK31Q9BXU1 1019 aa16.17■□□□□ 0.18
ACTN1-202ENST00000376839 FLT4P35916 1363 aa16.17■□□□□ 0.18
ACTN1-202ENST00000376839 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
ACTN1-202ENST00000376839 SBNO1A3KN83 1393 aa16.17■□□□□ 0.18
ACTN1-202ENST00000376839 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
ACTN1-202ENST00000376839 FKBP5Q13451 457 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-202ENST00000376839 UBE2Q2Q8WVN8 375 aa16.17■□□□□ 0.18
ACTN1-202ENST00000376839 LRRCC1Q9C099 1032 aa16.17■□□□□ 0.18
ACTN1-202ENST00000376839 MX1P20591 662 aa16.16■□□□□ 0.18
ACTN1-202ENST00000376839 ANP32BQ92688 251 aaKnown RBP16.16■□□□□ 0.18
ACTN1-202ENST00000376839 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
ACTN1-202ENST00000376839 IGSF1Q8N6C5 1336 aa16.16■□□□□ 0.18
ACTN1-202ENST00000376839 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
ACTN1-202ENST00000376839 AMPHP49418 695 aa16.15■□□□□ 0.18
ACTN1-202ENST00000376839 NOL8Q76FK4 1167 aaKnown RBP16.15■□□□□ 0.18
ACTN1-202ENST00000376839 RILPL2Q969X0 211 aa16.15■□□□□ 0.18
ACTN1-202ENST00000376839 ZSCAN30Q86W11 494 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 UNC5CLQ8IV45 518 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 TMEM63CQ9P1W3 806 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 CHMLP26374 656 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 LRRFIP2Q9Y608 721 aaKnown RBP16.14■□□□□ 0.17
ACTN1-202ENST00000376839 TTC21AQ8NDW8 1320 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 GNAI3P08754 354 aa16.14■□□□□ 0.17
ACTN1-202ENST00000376839 PLEKHG1Q9ULL1 1385 aa16.13■□□□□ 0.17
ACTN1-202ENST00000376839 FAM208AQ9UK61 1670 aaKnown RBP16.13■□□□□ 0.17
ACTN1-202ENST00000376839 XRN1Q8IZH2 1706 aaKnown RBP16.13■□□□□ 0.17
ACTN1-202ENST00000376839 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
ACTN1-202ENST00000376839 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
ACTN1-202ENST00000376839 IL25Q9H293 177 aa16.12■□□□□ 0.17
ACTN1-202ENST00000376839 CUL4AQ13619 759 aa16.12■□□□□ 0.17
ACTN1-202ENST00000376839 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
ACTN1-202ENST00000376839 SYCE3A1L190 88 aa16.11■□□□□ 0.17
ACTN1-202ENST00000376839 BRD1O95696 1058 aa16.11■□□□□ 0.17
ACTN1-202ENST00000376839 UPF3BQ9BZI7 483 aaKnown RBP16.11■□□□□ 0.17
ACTN1-202ENST00000376839 IL1RAPL2Q9NP60 686 aa16.11■□□□□ 0.17
ACTN1-202ENST00000376839 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
ACTN1-202ENST00000376839 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 MCCP23508 829 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 STAP2Q9UGK3 403 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 MCM2P49736 904 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 PDLIM2Q96JY6 352 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 USP44Q9H0E7 712 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 PIK3C2AO00443 1686 aa16.1■□□□□ 0.17
ACTN1-202ENST00000376839 RGPD8O14715 1765 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-202ENST00000376839 LRSAM1Q6UWE0 723 aa16.09■□□□□ 0.17
ACTN1-202ENST00000376839 HTATSF1O43719 755 aaKnown RBP16.09■□□□□ 0.17
ACTN1-202ENST00000376839 MSNP26038 577 aaKnown RBP16.09■□□□□ 0.17
ACTN1-202ENST00000376839 ANAPC15P60006 121 aa16.09■□□□□ 0.17
ACTN1-202ENST00000376839 NLRP6P59044 892 aa16.08■□□□□ 0.16
ACTN1-202ENST00000376839 NUTM1Q86Y26 1132 aa16.08■□□□□ 0.16
ACTN1-202ENST00000376839 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-202ENST00000376839 PHAXQ9H814 394 aaKnown RBP16.08■□□□□ 0.16
ACTN1-202ENST00000376839 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
ACTN1-202ENST00000376839 MAP4K4O95819 1239 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-202ENST00000376839 UBTFL1P0CB47 393 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-202ENST00000376839 HOXC9P31274 260 aa16.07■□□□□ 0.16
ACTN1-202ENST00000376839 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-202ENST00000376839 FOXD4L6Q3SYB3 417 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-202ENST00000376839 FOXD4L3Q6VB84 417 aaPredicted RBP16.07■□□□□ 0.16
ACTN1-202ENST00000376839 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
ACTN1-202ENST00000376839 MAP3K5Q99683 1374 aa16.07■□□□□ 0.16
ACTN1-202ENST00000376839 INTS4Q96HW7 963 aaKnown RBP16.07■□□□□ 0.16
ACTN1-202ENST00000376839 SRCIN1Q9C0H9 1055 aa16.07■□□□□ 0.16
ACTN1-202ENST00000376839 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.07■□□□□ 0.16
ACTN1-202ENST00000376839 DIP2AQ14689 1571 aa16.06■□□□□ 0.16
ACTN1-202ENST00000376839 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-202ENST00000376839 OFD1O75665 1012 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 MBD3O95983 291 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 HSP90AA2PQ14568 343 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-202ENST00000376839 TAF7Q15545 349 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-202ENST00000376839 USHBP1Q8N6Y0 703 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 RNF214Q8ND24 703 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 SSH3Q8TE77 659 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 IL17RAQ96F46 866 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 HS1BP3Q53T59 392 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 HDGFL1Q5TGJ6 251 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 PPP1R42Q7Z4L9 355 aa16.05■□□□□ 0.16
ACTN1-202ENST00000376839 NOL7Q9UMY1 257 aaKnown RBP16.04■□□□□ 0.16
ACTN1-202ENST00000376839 AOX1Q06278 1338 aa16.04■□□□□ 0.16
ACTN1-202ENST00000376839 PXDNLA1KZ92 1463 aa16.04■□□□□ 0.16
ACTN1-202ENST00000376839 N4BP2Q86UW6 1770 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms