RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 RUNDC1Q96C34 613 aa18.79■□□□□ 0.6
CCHCR1-201ENST00000376266 NCAPD2Q15021 1401 aa18.79■□□□□ 0.6
CCHCR1-201ENST00000376266 PDCL3Q9H2J4 239 aa18.79■□□□□ 0.6
CCHCR1-201ENST00000376266 C22orf23Q9BZE7 217 aa18.77■□□□□ 0.6
CCHCR1-201ENST00000376266 SPATA31A1Q5TZJ5 1347 aa18.77■□□□□ 0.59
CCHCR1-201ENST00000376266 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.59
CCHCR1-201ENST00000376266 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.59
CCHCR1-201ENST00000376266 VPS72Q15906 364 aa18.76■□□□□ 0.59
CCHCR1-201ENST00000376266 TCP11L2Q8N4U5 519 aa18.76■□□□□ 0.59
CCHCR1-201ENST00000376266 RAPGEF4Q8WZA2 1011 aa18.76■□□□□ 0.59
CCHCR1-201ENST00000376266 PCDHB15Q9Y5E8 787 aa18.76■□□□□ 0.59
CCHCR1-201ENST00000376266 RRP7AQ9Y3A4 280 aaKnown RBP18.76■□□□□ 0.59
CCHCR1-201ENST00000376266 NEUROD2Q15784 382 aa18.75■□□□□ 0.59
CCHCR1-201ENST00000376266 MEGF6O75095 1541 aa18.75■□□□□ 0.59
CCHCR1-201ENST00000376266 MFAP1P55081 439 aaKnown RBP18.74■□□□□ 0.59
CCHCR1-201ENST00000376266 AAMPQ13685 434 aa18.74■□□□□ 0.59
CCHCR1-201ENST00000376266 HSCBQ8IWL3 235 aa18.74■□□□□ 0.59
CCHCR1-201ENST00000376266 RWDD1Q9H446 243 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-201ENST00000376266 TATP17735 454 aaPredicted RBP18.73■□□□□ 0.59
CCHCR1-201ENST00000376266 IL2RBP14784 551 aa18.73■□□□□ 0.59
CCHCR1-201ENST00000376266 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
CCHCR1-201ENST00000376266 QTRT2Q9H974 415 aaKnown RBP18.73■□□□□ 0.59
CCHCR1-201ENST00000376266 KIAA1211Q6ZU35 1233 aa18.72■□□□□ 0.59
CCHCR1-201ENST00000376266 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
CCHCR1-201ENST00000376266 NGEFQ8N5V2 710 aa18.72■□□□□ 0.59
CCHCR1-201ENST00000376266 TRPC5Q9UL62 973 aaPredicted RBP18.72■□□□□ 0.59
CCHCR1-201ENST00000376266 TMPOP42166 694 aaKnown RBP18.71■□□□□ 0.59
CCHCR1-201ENST00000376266 GAS2L3Q86XJ1 694 aa18.71■□□□□ 0.59
CCHCR1-201ENST00000376266 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
CCHCR1-201ENST00000376266 GJD4Q96KN9 370 aaPredicted RBP18.7■□□□□ 0.58
CCHCR1-201ENST00000376266 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
CCHCR1-201ENST00000376266 ATRNO75882 1429 aa18.7■□□□□ 0.58
CCHCR1-201ENST00000376266 NFE2L2Q16236 605 aa18.7■□□□□ 0.58
CCHCR1-201ENST00000376266 PLEKHO1Q53GL0 409 aaPredicted RBP18.7■□□□□ 0.58
CCHCR1-201ENST00000376266 RIPK4P57078 832 aa18.69■□□□□ 0.58
CCHCR1-201ENST00000376266 ZNF772Q68DY9 489 aaPredicted RBP18.69■□□□□ 0.58
CCHCR1-201ENST00000376266 OVOS2A0A0G2JMS6 1433 aa18.69■□□□□ 0.58
CCHCR1-201ENST00000376266 RLBP1P12271 317 aa18.69■□□□□ 0.58
CCHCR1-201ENST00000376266 WWC1Q8IX03 1113 aa18.69■□□□□ 0.58
CCHCR1-201ENST00000376266 DISP2A7MBM2 1401 aa18.68■□□□□ 0.58
CCHCR1-201ENST00000376266 RARSP54136 660 aaKnown RBP18.68■□□□□ 0.58
CCHCR1-201ENST00000376266 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
CCHCR1-201ENST00000376266 BARGINQ6ZT62 677 aa18.68■□□□□ 0.58
CCHCR1-201ENST00000376266 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
CCHCR1-201ENST00000376266 TNNQ9UQP3 1299 aa18.68■□□□□ 0.58
CCHCR1-201ENST00000376266 ZNF530Q6P9A1 599 aaPredicted RBP18.67■□□□□ 0.58
CCHCR1-201ENST00000376266 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
CCHCR1-201ENST00000376266 ZCRB1Q8TBF4 217 aaKnown RBP18.67■□□□□ 0.58
CCHCR1-201ENST00000376266 TNPO1Q92973 898 aaKnown RBP18.67■□□□□ 0.58
CCHCR1-201ENST00000376266 GBP4Q96PP9 640 aa18.67■□□□□ 0.58
CCHCR1-201ENST00000376266 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
CCHCR1-201ENST00000376266 GLI3P10071 1580 aa18.66■□□□□ 0.58
CCHCR1-201ENST00000376266 SKOR2Q2VWA4 1001 aaPredicted RBP18.66■□□□□ 0.58
CCHCR1-201ENST00000376266 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
CCHCR1-201ENST00000376266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCHCR1-201ENST00000376266 PARP4Q9UKK3 1724 aaKnown RBP18.66■□□□□ 0.58
CCHCR1-201ENST00000376266 A0A0G2JS52 829 aa18.65■□□□□ 0.58
CCHCR1-201ENST00000376266 CALD1Q05682 793 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-201ENST00000376266 TRIM35Q9UPQ4 493 aa18.65■□□□□ 0.58
CCHCR1-201ENST00000376266 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-201ENST00000376266 CDCA7Q9BWT1 371 aaPredicted RBP18.65■□□□□ 0.58
CCHCR1-201ENST00000376266 BCL2L13Q9BXK5 485 aa18.65■□□□□ 0.58
CCHCR1-201ENST00000376266 CYP27B1O15528 508 aa18.64■□□□□ 0.57
CCHCR1-201ENST00000376266 CCDC173Q0VFZ6 552 aa18.64■□□□□ 0.57
CCHCR1-201ENST00000376266 EXOC5O00471 708 aa18.64■□□□□ 0.57
CCHCR1-201ENST00000376266 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
CCHCR1-201ENST00000376266 PODXL2Q9NZ53 605 aa18.64■□□□□ 0.57
CCHCR1-201ENST00000376266 WNK3Q9BYP7 1800 aa18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 ZSCAN30Q86W11 494 aa18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 ANP32BQ92688 251 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 GNAT3A8MTJ3 354 aa18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 RBM10P98175 930 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 DDB1Q16531 1140 aa18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 DLG5Q8TDM6 1919 aa18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 PKD1L3Q7Z443 1732 aa18.63■□□□□ 0.57
CCHCR1-201ENST00000376266 OFD1O75665 1012 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 DDIT3P35638 169 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 PLEKHG2Q9H7P9 1386 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 PHKG2P15735 406 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 PTMSP20962 102 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 MSNP26038 577 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 MCM10Q7L590 875 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 PCDH11XQ9BZA7 1347 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 PCDH11YQ9BZA8 1340 aa18.62■□□□□ 0.57
CCHCR1-201ENST00000376266 POTEAQ6S8J7 498 aa18.61■□□□□ 0.57
CCHCR1-201ENST00000376266 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
CCHCR1-201ENST00000376266 IFNL2Q8IZJ0 200 aa18.61■□□□□ 0.57
CCHCR1-201ENST00000376266 MAP3K5Q99683 1374 aa18.61■□□□□ 0.57
CCHCR1-201ENST00000376266 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
CCHCR1-201ENST00000376266 CIZ1Q9ULV3 898 aaPredicted RBP18.61■□□□□ 0.57
CCHCR1-201ENST00000376266 NASPP49321 788 aaPredicted RBP18.6■□□□□ 0.57
CCHCR1-201ENST00000376266 RBM6P78332 1123 aaKnown RBP18.6■□□□□ 0.57
CCHCR1-201ENST00000376266 CCDC27Q2M243 656 aa18.6■□□□□ 0.57
CCHCR1-201ENST00000376266 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.6■□□□□ 0.57
CCHCR1-201ENST00000376266 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
CCHCR1-201ENST00000376266 PPP1R9BQ96SB3 815 aa18.6■□□□□ 0.57
CCHCR1-201ENST00000376266 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms