RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 MYH16Q9H6N6 1097 aa27.49■■□□□ 1.99
HLA-C-201ENST00000376228 AEBP1Q8IUX7 1158 aa27.48■■□□□ 1.99
HLA-C-201ENST00000376228 SULT6B1Q6IMI4 303 aa27.47■■□□□ 1.99
HLA-C-201ENST00000376228 PROM2Q8N271 834 aa27.47■■□□□ 1.99
HLA-C-201ENST00000376228 ITGB4P16144 1822 aa27.47■■□□□ 1.99
HLA-C-201ENST00000376228 SPG7Q9UQ90 795 aa27.46■■□□□ 1.99
HLA-C-201ENST00000376228 IRX6P78412 446 aaPredicted RBP27.45■■□□□ 1.98
HLA-C-201ENST00000376228 LMOD3Q0VAK6 560 aa27.45■■□□□ 1.98
HLA-C-201ENST00000376228 TXNRD1Q16881 649 aa27.44■■□□□ 1.98
HLA-C-201ENST00000376228 CALD1Q05682 793 aaKnown RBP27.42■■□□□ 1.98
HLA-C-201ENST00000376228 CT47B1P0C2W7 299 aaPredicted RBP27.41■■□□□ 1.98
HLA-C-201ENST00000376228 NBPF14Q5TI25 921 aa27.41■■□□□ 1.98
HLA-C-201ENST00000376228 PPP4R2Q9NY27 417 aa27.41■■□□□ 1.98
HLA-C-201ENST00000376228 ANO8Q9HCE9 1232 aaPredicted RBP27.41■■□□□ 1.98
HLA-C-201ENST00000376228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.41■■□□□ 1.98
HLA-C-201ENST00000376228 LY75O60449 1722 aa27.4■■□□□ 1.98
HLA-C-201ENST00000376228 PHKG2P15735 406 aa27.38■■□□□ 1.97
HLA-C-201ENST00000376228 IFNL2Q8IZJ0 200 aa27.37■■□□□ 1.97
HLA-C-201ENST00000376228 MPRIPQ6WCQ1 1025 aa27.36■■□□□ 1.97
HLA-C-201ENST00000376228 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.36■■□□□ 1.97
HLA-C-201ENST00000376228 NKX1-1Q15270 411 aaPredicted RBP27.36■■□□□ 1.97
HLA-C-201ENST00000376228 PAPPAQ13219 1627 aa27.35■■□□□ 1.97
HLA-C-201ENST00000376228 FANCIQ9NVI1 1328 aa27.35■■□□□ 1.97
HLA-C-201ENST00000376228 PLEKHG2Q9H7P9 1386 aa27.35■■□□□ 1.97
HLA-C-201ENST00000376228 PLEKHO1Q53GL0 409 aaPredicted RBP27.35■■□□□ 1.97
HLA-C-201ENST00000376228 KCNQ4P56696 695 aa27.34■■□□□ 1.97
HLA-C-201ENST00000376228 ZNF530Q6P9A1 599 aaPredicted RBP27.34■■□□□ 1.97
HLA-C-201ENST00000376228 LRRC4BQ9NT99 713 aa27.34■■□□□ 1.97
HLA-C-201ENST00000376228 IFT57Q9NWB7 429 aa27.32■■□□□ 1.96
HLA-C-201ENST00000376228 ZNF853P0CG23 659 aa27.31■■□□□ 1.96
HLA-C-201ENST00000376228 AMOTQ4VCS5 1084 aa27.31■■□□□ 1.96
HLA-C-201ENST00000376228 VIRMAQ69YN4 1812 aaKnown RBP27.31■■□□□ 1.96
HLA-C-201ENST00000376228 GNAI1P63096 354 aa27.31■■□□□ 1.96
HLA-C-201ENST00000376228 LRP5O75197 1615 aa27.3■■□□□ 1.96
HLA-C-201ENST00000376228 GAS2L2Q8NHY3 880 aa27.3■■□□□ 1.96
HLA-C-201ENST00000376228 CASZ1Q86V15 1759 aa27.29■■□□□ 1.96
HLA-C-201ENST00000376228 PIGBQ92521 554 aa27.29■■□□□ 1.96
HLA-C-201ENST00000376228 STK32BQ9NY57 414 aa27.29■■□□□ 1.96
HLA-C-201ENST00000376228 HTATSF1O43719 755 aaKnown RBP27.28■■□□□ 1.96
HLA-C-201ENST00000376228 RARSP54136 660 aaKnown RBP27.28■■□□□ 1.96
HLA-C-201ENST00000376228 KDM6AO15550 1401 aaPredicted RBP27.27■■□□□ 1.96
HLA-C-201ENST00000376228 CFAP44Q96MT7 982 aa27.27■■□□□ 1.96
HLA-C-201ENST00000376228 PALLDQ8WX93 1383 aa27.27■■□□□ 1.96
HLA-C-201ENST00000376228 TUBGCP6Q96RT7 1819 aa27.27■■□□□ 1.96
HLA-C-201ENST00000376228 SCN11AQ9UI33 1791 aa27.27■■□□□ 1.96
HLA-C-201ENST00000376228 SLC15A2Q16348 729 aa27.26■■□□□ 1.96
HLA-C-201ENST00000376228 C1orf141Q5JVX7 400 aa27.26■■□□□ 1.96
HLA-C-201ENST00000376228 SLC27A3Q5K4L6 730 aa27.26■■□□□ 1.96
HLA-C-201ENST00000376228 TSR2Q969E8 191 aaKnown RBP27.26■■□□□ 1.96
HLA-C-201ENST00000376228 PDGFDQ9GZP0 370 aaPredicted RBP27.26■■□□□ 1.96
HLA-C-201ENST00000376228 TMOD3Q9NYL9 352 aa27.26■■□□□ 1.96
HLA-C-201ENST00000376228 C5P01031 1676 aa27.26■■□□□ 1.95
HLA-C-201ENST00000376228 MTHFSDQ2M296 383 aaKnown RBP27.26■■□□□ 1.95
HLA-C-201ENST00000376228 CCNL1Q9UK58 526 aaPredicted RBP27.26■■□□□ 1.95
HLA-C-201ENST00000376228 TAF1LQ8IZX4 1826 aa27.25■■□□□ 1.95
HLA-C-201ENST00000376228 PLIN1O60240 522 aa27.25■■□□□ 1.95
HLA-C-201ENST00000376228 EXOSC9Q06265 439 aaKnown RBP27.25■■□□□ 1.95
HLA-C-201ENST00000376228 ZNF827Q17R98 1081 aa27.25■■□□□ 1.95
HLA-C-201ENST00000376228 ZNF428Q96B54 188 aa27.25■■□□□ 1.95
HLA-C-201ENST00000376228 DCAF5Q96JK2 942 aa27.25■■□□□ 1.95
HLA-C-201ENST00000376228 BCAR3O75815 825 aa27.24■■□□□ 1.95
HLA-C-201ENST00000376228 HSP90AB1P08238 724 aaKnown RBP27.24■■□□□ 1.95
HLA-C-201ENST00000376228 PELP1Q8IZL8 1130 aaKnown RBP27.22■■□□□ 1.95
HLA-C-201ENST00000376228 PDE3AQ14432 1141 aa27.21■■□□□ 1.95
HLA-C-201ENST00000376228 THUMPD2Q9BTF0 503 aaKnown RBP27.21■■□□□ 1.95
HLA-C-201ENST00000376228 ASAP1Q9ULH1 1129 aa27.21■■□□□ 1.95
HLA-C-201ENST00000376228 EXOC6Q8TAG9 804 aa27.2■■□□□ 1.94
HLA-C-201ENST00000376228 QSER1Q2KHR3 1735 aa27.19■■□□□ 1.94
HLA-C-201ENST00000376228 ERVV-2B6SEH9 535 aa27.19■■□□□ 1.94
HLA-C-201ENST00000376228 AKAP4Q5JQC9 854 aa27.19■■□□□ 1.94
HLA-C-201ENST00000376228 SMARCC1Q92922 1105 aaPredicted RBP27.19■■□□□ 1.94
HLA-C-201ENST00000376228 AKT1S1Q96B36 256 aa27.19■■□□□ 1.94
HLA-C-201ENST00000376228 MBIPQ9NS73 344 aa27.18■■□□□ 1.94
HLA-C-201ENST00000376228 CHL1O00533 1208 aa27.17■■□□□ 1.94
HLA-C-201ENST00000376228 CABP4P57796 275 aa27.17■■□□□ 1.94
HLA-C-201ENST00000376228 RTF1Q92541 710 aaKnown RBP27.17■■□□□ 1.94
HLA-C-201ENST00000376228 GNAT3A8MTJ3 354 aa27.16■■□□□ 1.94
HLA-C-201ENST00000376228 DCTN1Q14203 1278 aa27.16■■□□□ 1.94
HLA-C-201ENST00000376228 ALDH1L2Q3SY69 923 aa27.16■■□□□ 1.94
HLA-C-201ENST00000376228 ATG3Q9NT62 314 aa27.16■■□□□ 1.94
HLA-C-201ENST00000376228 ZBTB7AO95365 584 aa27.16■■□□□ 1.94
HLA-C-201ENST00000376228 BRPF1P55201 1214 aaPredicted RBP27.16■■□□□ 1.94
HLA-C-201ENST00000376228 C20orf194Q5TEA3 1177 aa27.16■■□□□ 1.94
HLA-C-201ENST00000376228 CRBNQ96SW2 442 aa27.16■■□□□ 1.94
HLA-C-201ENST00000376228 MAP3K5Q99683 1374 aa27.15■■□□□ 1.94
HLA-C-201ENST00000376228 C4BP0C0L5 1744 aa27.15■■□□□ 1.94
HLA-C-201ENST00000376228 LGR6Q9HBX8 967 aa27.15■■□□□ 1.94
HLA-C-201ENST00000376228 LAS1LQ9Y4W2 734 aaKnown RBP27.15■■□□□ 1.94
HLA-C-201ENST00000376228 TFCP2L1Q9NZI6 479 aa27.14■■□□□ 1.94
HLA-C-201ENST00000376228 ADAMTS7Q9UKP4 1686 aa27.14■■□□□ 1.93
HLA-C-201ENST00000376228 MCM10Q7L590 875 aa27.13■■□□□ 1.93
HLA-C-201ENST00000376228 NFATC2IPQ8NCF5 419 aa27.13■■□□□ 1.93
HLA-C-201ENST00000376228 LOC102724428A0A0B4J2F2 783 aa27.12■■□□□ 1.93
HLA-C-201ENST00000376228 SIK1P57059 783 aa27.12■■□□□ 1.93
HLA-C-201ENST00000376228 B4GALNT3Q6L9W6 998 aa27.12■■□□□ 1.93
HLA-C-201ENST00000376228 BABAM1Q9NWV8 329 aa27.12■■□□□ 1.93
HLA-C-201ENST00000376228 VAMP4O75379 141 aa27.11■■□□□ 1.93
HLA-C-201ENST00000376228 CCDC136Q96JN2 1154 aa27.11■■□□□ 1.93
HLA-C-201ENST00000376228 SPON1Q9HCB6 807 aa27.11■■□□□ 1.93
HLA-C-201ENST00000376228 RNMTO43148 476 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms