RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 HOXB7P09629 217 aa23.39■■□□□ 1.34
PPP1R3F-202ENST00000376188 AMOTQ4VCS5 1084 aa23.39■■□□□ 1.34
PPP1R3F-202ENST00000376188 PLEKHO1Q53GL0 409 aaPredicted RBP23.39■■□□□ 1.34
PPP1R3F-202ENST00000376188 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.33
PPP1R3F-202ENST00000376188 AKAP4Q5JQC9 854 aa23.39■■□□□ 1.33
PPP1R3F-202ENST00000376188 HDGFL1Q5TGJ6 251 aa23.39■■□□□ 1.33
PPP1R3F-202ENST00000376188 MST1RQ04912 1400 aa23.39■■□□□ 1.33
PPP1R3F-202ENST00000376188 OVOS2A0A0G2JMS6 1433 aa23.37■■□□□ 1.33
PPP1R3F-202ENST00000376188 XPCQ01831 940 aaPredicted RBP23.37■■□□□ 1.33
PPP1R3F-202ENST00000376188 GSE1Q14687 1217 aa23.37■■□□□ 1.33
PPP1R3F-202ENST00000376188 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
PPP1R3F-202ENST00000376188 C19orf44Q9H6X5 657 aa23.37■■□□□ 1.33
PPP1R3F-202ENST00000376188 LRRC59Q96AG4 307 aaKnown RBP23.37■■□□□ 1.33
PPP1R3F-202ENST00000376188 ALS2Q96Q42 1657 aa23.36■■□□□ 1.33
PPP1R3F-202ENST00000376188 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
PPP1R3F-202ENST00000376188 C16orf71Q8IYS4 520 aaPredicted RBP23.36■■□□□ 1.33
PPP1R3F-202ENST00000376188 KRT28Q7Z3Y7 464 aa23.35■■□□□ 1.33
PPP1R3F-202ENST00000376188 EIF4A1P60842 406 aaKnown RBP23.35■■□□□ 1.33
PPP1R3F-202ENST00000376188 TEFQ10587 303 aa23.34■■□□□ 1.33
PPP1R3F-202ENST00000376188 LMOD2Q6P5Q4 547 aa23.34■■□□□ 1.33
PPP1R3F-202ENST00000376188 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
PPP1R3F-202ENST00000376188 ANKRD24Q8TF21 1146 aa23.33■■□□□ 1.33
PPP1R3F-202ENST00000376188 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.33
PPP1R3F-202ENST00000376188 RGPD5Q99666 1765 aa23.33■■□□□ 1.33
PPP1R3F-202ENST00000376188 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.33
PPP1R3F-202ENST00000376188 OTUD7AQ8TE49 926 aaPredicted RBP23.33■■□□□ 1.33
PPP1R3F-202ENST00000376188 LMTK3Q96Q04 1460 aa23.32■■□□□ 1.32
PPP1R3F-202ENST00000376188 APBB1O00213 710 aa23.32■■□□□ 1.32
PPP1R3F-202ENST00000376188 C1orf141Q5JVX7 400 aa23.32■■□□□ 1.32
PPP1R3F-202ENST00000376188 CHMP5Q9NZZ3 219 aa23.32■■□□□ 1.32
PPP1R3F-202ENST00000376188 CASC1Q6TDU7 716 aa23.32■■□□□ 1.32
PPP1R3F-202ENST00000376188 KIF2CQ99661 725 aa23.32■■□□□ 1.32
PPP1R3F-202ENST00000376188 OSBPL3Q9H4L5 887 aa23.32■■□□□ 1.32
PPP1R3F-202ENST00000376188 ATP8B2P98198 1209 aa23.31■■□□□ 1.32
PPP1R3F-202ENST00000376188 PXDNQ92626 1479 aa23.31■■□□□ 1.32
PPP1R3F-202ENST00000376188 DCCP43146 1447 aa23.31■■□□□ 1.32
PPP1R3F-202ENST00000376188 BTBD11A6QL63 1104 aa23.3■■□□□ 1.32
PPP1R3F-202ENST00000376188 SPRYD3Q8NCJ5 442 aa23.3■■□□□ 1.32
PPP1R3F-202ENST00000376188 BCL11AQ9H165 835 aa23.3■■□□□ 1.32
PPP1R3F-202ENST00000376188 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
PPP1R3F-202ENST00000376188 SDSP20132 328 aa23.29■■□□□ 1.32
PPP1R3F-202ENST00000376188 RNMTO43148 476 aaKnown RBP23.29■■□□□ 1.32
PPP1R3F-202ENST00000376188 TUBGCP6Q96RT7 1819 aa23.28■■□□□ 1.32
PPP1R3F-202ENST00000376188 UBTFL1P0CB47 393 aaPredicted RBP23.28■■□□□ 1.32
PPP1R3F-202ENST00000376188 MPRIPQ6WCQ1 1025 aa23.28■■□□□ 1.32
PPP1R3F-202ENST00000376188 USP44Q9H0E7 712 aa23.28■■□□□ 1.32
PPP1R3F-202ENST00000376188 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
PPP1R3F-202ENST00000376188 ADAMTS7Q9UKP4 1686 aa23.28■■□□□ 1.32
PPP1R3F-202ENST00000376188 EIF2S2P20042 333 aaKnown RBP23.28■■□□□ 1.32
PPP1R3F-202ENST00000376188 LRRCC1Q9C099 1032 aa23.28■■□□□ 1.32
PPP1R3F-202ENST00000376188 LRRFIP2Q9Y608 721 aaKnown RBP23.27■■□□□ 1.32
PPP1R3F-202ENST00000376188 ATF3P18847 181 aa23.27■■□□□ 1.31
PPP1R3F-202ENST00000376188 SRCIN1Q9C0H9 1055 aa23.27■■□□□ 1.31
PPP1R3F-202ENST00000376188 EXOC6BQ9Y2D4 811 aa23.27■■□□□ 1.31
PPP1R3F-202ENST00000376188 IBTKQ9P2D0 1353 aaPredicted RBP23.27■■□□□ 1.31
PPP1R3F-202ENST00000376188 PDE1AP54750 535 aa23.26■■□□□ 1.31
PPP1R3F-202ENST00000376188 ERBB3P21860 1342 aa23.26■■□□□ 1.31
PPP1R3F-202ENST00000376188 STRCP1A6NGW2 1772 aa23.26■■□□□ 1.31
PPP1R3F-202ENST00000376188 PNMA6EA0A0J9YXQ4 647 aa23.25■■□□□ 1.31
PPP1R3F-202ENST00000376188 PLEKHG5O94827 1062 aa23.25■■□□□ 1.31
PPP1R3F-202ENST00000376188 CHPF2Q9P2E5 772 aa23.25■■□□□ 1.31
PPP1R3F-202ENST00000376188 AXIN2Q9Y2T1 843 aa23.25■■□□□ 1.31
PPP1R3F-202ENST00000376188 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
PPP1R3F-202ENST00000376188 TMEM94Q12767 1356 aa23.24■■□□□ 1.31
PPP1R3F-202ENST00000376188 KCNQ3O43525 872 aa23.24■■□□□ 1.31
PPP1R3F-202ENST00000376188 SALL3Q9BXA9 1300 aa23.23■■□□□ 1.31
PPP1R3F-202ENST00000376188 DNAAF4Q8WXU2 420 aa23.23■■□□□ 1.31
PPP1R3F-202ENST00000376188 REC8O95072 547 aa23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 DDIT3P35638 169 aa23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 RABEP1Q15276 862 aa23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 USP26Q9BXU7 913 aa23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 DBF4Q9UBU7 674 aaPredicted RBP23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 CIZ1Q9ULV3 898 aaPredicted RBP23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 K7ELQ4 463 aaPredicted RBP23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 SSH3Q8TE77 659 aa23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 HEG1Q9ULI3 1381 aa23.22■■□□□ 1.31
PPP1R3F-202ENST00000376188 ABCC6O95255 1503 aa23.21■■□□□ 1.31
PPP1R3F-202ENST00000376188 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
PPP1R3F-202ENST00000376188 MX1P20591 662 aa23.2■■□□□ 1.3
PPP1R3F-202ENST00000376188 BEND3Q5T5X7 828 aa23.2■■□□□ 1.3
PPP1R3F-202ENST00000376188 COL18A1P39060 1754 aa23.2■■□□□ 1.3
PPP1R3F-202ENST00000376188 PI4KAP2A4QPH2 592 aa23.19■■□□□ 1.3
PPP1R3F-202ENST00000376188 ZC3H6P61129 1189 aaKnown RBP23.19■■□□□ 1.3
PPP1R3F-202ENST00000376188 PI4KAP1Q8N8J0 262 aa23.19■■□□□ 1.3
PPP1R3F-202ENST00000376188 GIGYF1O75420 1035 aaPredicted RBP23.19■■□□□ 1.3
PPP1R3F-202ENST00000376188 MCM4P33991 863 aa23.19■■□□□ 1.3
PPP1R3F-202ENST00000376188 PLEKHG2Q9H7P9 1386 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 ERC2O15083 957 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 RAB11FIP3O75154 756 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 ADCY9O60503 1353 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 AOX1Q06278 1338 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 NPHP3Q7Z494 1330 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 POLA2Q14181 598 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 CADPS2Q86UW7 1296 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 RAPGEF4Q8WZA2 1011 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 STAP2Q9UGK3 403 aa23.18■■□□□ 1.3
PPP1R3F-202ENST00000376188 CD2BP2O95400 341 aaKnown RBP23.17■■□□□ 1.3
PPP1R3F-202ENST00000376188 HSP90AA1P07900 732 aaKnown RBP23.17■■□□□ 1.3
PPP1R3F-202ENST00000376188 RBM42Q9BTD8 480 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms