RNA–Protein interactions for RNA: ENST00000376098.4

PRAMEF17-201, Transcript of PRAME family member 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF17, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17-201ENST00000376098 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
PRAMEF17-201ENST00000376098 BTAF1O14981 1849 aa13.02□□□□□ -0.32
PRAMEF17-201ENST00000376098 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.33
PRAMEF17-201ENST00000376098 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.33
PRAMEF17-201ENST00000376098 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.33
PRAMEF17-201ENST00000376098 BCL9O00512 1426 aa13.02□□□□□ -0.33
PRAMEF17-201ENST00000376098 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
PRAMEF17-201ENST00000376098 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
PRAMEF17-201ENST00000376098 SIPA1L3O60292 1781 aaPredicted RBP13□□□□□ -0.33
PRAMEF17-201ENST00000376098 MAP3K5Q99683 1374 aa13□□□□□ -0.33
PRAMEF17-201ENST00000376098 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
PRAMEF17-201ENST00000376098 NFE2L2Q16236 605 aa13□□□□□ -0.33
PRAMEF17-201ENST00000376098 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
PRAMEF17-201ENST00000376098 KDM6AO15550 1401 aaPredicted RBP12.99□□□□□ -0.33
PRAMEF17-201ENST00000376098 TRIM37O94972 964 aa12.99□□□□□ -0.33
PRAMEF17-201ENST00000376098 TMPOP42166 694 aaKnown RBP12.99□□□□□ -0.33
PRAMEF17-201ENST00000376098 DCAF5Q96JK2 942 aa12.99□□□□□ -0.33
PRAMEF17-201ENST00000376098 RNMTO43148 476 aaKnown RBP12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 RRP7AQ9Y3A4 280 aaKnown RBP12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 APAF1O14727 1248 aa12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 KCNQ2O43526 872 aa12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 PRIM1P49642 420 aaKnown RBP12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 RIPK4P57078 832 aa12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
PRAMEF17-201ENST00000376098 PTF1AQ7RTS3 328 aa12.97□□□□□ -0.33
PRAMEF17-201ENST00000376098 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
PRAMEF17-201ENST00000376098 ERVV-2B6SEH9 535 aa12.96□□□□□ -0.33
PRAMEF17-201ENST00000376098 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
PRAMEF17-201ENST00000376098 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
PRAMEF17-201ENST00000376098 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.33
PRAMEF17-201ENST00000376098 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
PRAMEF17-201ENST00000376098 RGL2O15211 777 aa12.95□□□□□ -0.34
PRAMEF17-201ENST00000376098 CABP4P57796 275 aa12.95□□□□□ -0.34
PRAMEF17-201ENST00000376098 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
PRAMEF17-201ENST00000376098 MCM10Q7L590 875 aa12.95□□□□□ -0.34
PRAMEF17-201ENST00000376098 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRAMEF17-201ENST00000376098 LY75O60449 1722 aa12.95□□□□□ -0.34
PRAMEF17-201ENST00000376098 MRC1P22897 1456 aa12.95□□□□□ -0.34
PRAMEF17-201ENST00000376098 TMOD3Q9NYL9 352 aa12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 RGPD4Q7Z3J3 1758 aa12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 SF3B2Q13435 895 aaKnown RBP12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 CCDC125Q86Z20 511 aa12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 PIGBQ92521 554 aa12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
PRAMEF17-201ENST00000376098 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
PRAMEF17-201ENST00000376098 PAPPAQ13219 1627 aa12.93□□□□□ -0.34
PRAMEF17-201ENST00000376098 APBA3O96018 575 aa12.93□□□□□ -0.34
PRAMEF17-201ENST00000376098 TEFQ10587 303 aa12.93□□□□□ -0.34
PRAMEF17-201ENST00000376098 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
PRAMEF17-201ENST00000376098 EP400Q96L91 3159 aa12.93□□□□□ -0.34
PRAMEF17-201ENST00000376098 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
PRAMEF17-201ENST00000376098 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
PRAMEF17-201ENST00000376098 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
PRAMEF17-201ENST00000376098 UBR2Q8IWV8 1755 aa12.91□□□□□ -0.34
PRAMEF17-201ENST00000376098 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
PRAMEF17-201ENST00000376098 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
PRAMEF17-201ENST00000376098 RREB1Q92766 1687 aa12.9□□□□□ -0.34
PRAMEF17-201ENST00000376098 BAG6P46379 1132 aa12.9□□□□□ -0.35
PRAMEF17-201ENST00000376098 ATG3Q9NT62 314 aa12.9□□□□□ -0.35
PRAMEF17-201ENST00000376098 ASAP1Q9ULH1 1129 aa12.9□□□□□ -0.35
PRAMEF17-201ENST00000376098 PLSCR1O15162 318 aa12.89□□□□□ -0.35
PRAMEF17-201ENST00000376098 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
PRAMEF17-201ENST00000376098 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
PRAMEF17-201ENST00000376098 CCDC27Q2M243 656 aa12.89□□□□□ -0.35
PRAMEF17-201ENST00000376098 DEFB132Q7Z7B7 95 aa12.89□□□□□ -0.35
PRAMEF17-201ENST00000376098 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
PRAMEF17-201ENST00000376098 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
PRAMEF17-201ENST00000376098 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
PRAMEF17-201ENST00000376098 WWC1Q8IX03 1113 aa12.88□□□□□ -0.35
PRAMEF17-201ENST00000376098 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
PRAMEF17-201ENST00000376098 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
PRAMEF17-201ENST00000376098 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
PRAMEF17-201ENST00000376098 ZNF831Q5JPB2 1677 aa12.87□□□□□ -0.35
PRAMEF17-201ENST00000376098 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
PRAMEF17-201ENST00000376098 C5P01031 1676 aa12.87□□□□□ -0.35
PRAMEF17-201ENST00000376098 CAMKK2Q96RR4 588 aa12.86□□□□□ -0.35
PRAMEF17-201ENST00000376098 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
PRAMEF17-201ENST00000376098 TJP1Q07157 1748 aa12.86□□□□□ -0.35
PRAMEF17-201ENST00000376098 CALD1Q05682 793 aaKnown RBP12.86□□□□□ -0.35
PRAMEF17-201ENST00000376098 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
PRAMEF17-201ENST00000376098 TTC5Q8N0Z6 440 aa12.86□□□□□ -0.35
PRAMEF17-201ENST00000376098 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
PRAMEF17-201ENST00000376098 LAS1LQ9Y4W2 734 aaKnown RBP12.86□□□□□ -0.35
PRAMEF17-201ENST00000376098 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
PRAMEF17-201ENST00000376098 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
PRAMEF17-201ENST00000376098 KCNQ3O43525 872 aa12.85□□□□□ -0.35
PRAMEF17-201ENST00000376098 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
PRAMEF17-201ENST00000376098 ZNF790Q6PG37 636 aa12.85□□□□□ -0.35
PRAMEF17-201ENST00000376098 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
PRAMEF17-201ENST00000376098 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
PRAMEF17-201ENST00000376098 SIK1P57059 783 aa12.84□□□□□ -0.35
PRAMEF17-201ENST00000376098 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRAMEF17-201ENST00000376098 WDR63Q8IWG1 891 aa12.84□□□□□ -0.35
PRAMEF17-201ENST00000376098 BABAM1Q9NWV8 329 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms