RNA–Protein interactions for RNA: ENST00000375835.8

SHC3-202, Transcript of SHC adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC3, Length 9,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3-202ENST00000375835 U3KPZ7 1027 aaPredicted RBP20.81■□□□□ 0.92
SHC3-202ENST00000375835 FERP16591 822 aa20.81■□□□□ 0.92
SHC3-202ENST00000375835 TTC31Q49AM3 519 aaPredicted RBP20.81■□□□□ 0.92
SHC3-202ENST00000375835 C16orf45Q96MC5 204 aaPredicted RBP20.81■□□□□ 0.92
SHC3-202ENST00000375835 NUP88Q99567 741 aaPredicted RBP20.81■□□□□ 0.92
SHC3-202ENST00000375835 CCDC94Q9BW85 323 aaPredicted RBP20.81■□□□□ 0.92
SHC3-202ENST00000375835 A6NNZ2 444 aa20.81■□□□□ 0.92
SHC3-202ENST00000375835 TUBB8Q3ZCM7 444 aa20.81■□□□□ 0.92
SHC3-202ENST00000375835 PLVAPQ9BX97 442 aa20.81■□□□□ 0.92
SHC3-202ENST00000375835 SOGA3Q5TF21 947 aa20.81■□□□□ 0.92
SHC3-202ENST00000375835 GOPCQ9HD26 462 aa20.81■□□□□ 0.92
SHC3-202ENST00000375835 CCDC196A0A1B0GTZ2 297 aa20.8■□□□□ 0.92
SHC3-202ENST00000375835 NEBLO76041 1014 aa20.8■□□□□ 0.92
SHC3-202ENST00000375835 CCDC178Q5BJE1 867 aa20.8■□□□□ 0.92
SHC3-202ENST00000375835 OPA1O60313 960 aa20.8■□□□□ 0.92
SHC3-202ENST00000375835 DDX23Q9BUQ8 820 aaKnown RBP20.8■□□□□ 0.92
SHC3-202ENST00000375835 RAB34Q9BZG1 259 aa20.8■□□□□ 0.92
SHC3-202ENST00000375835 CASTP20810 708 aaKnown RBP20.8■□□□□ 0.92
SHC3-202ENST00000375835 CASKIN1Q8WXD9 1431 aa20.79■□□□□ 0.92
SHC3-202ENST00000375835 HNRNPMP52272 730 aaKnown RBP eCLIP20.79■□□□□ 0.92
SHC3-202ENST00000375835 ZNF287Q9HBT7 754 aa20.79■□□□□ 0.92
SHC3-202ENST00000375835 MAPK8IP2Q13387 824 aaPredicted RBP20.79■□□□□ 0.92
SHC3-202ENST00000375835 RASAL2Q9UJF2 1139 aa20.79■□□□□ 0.92
SHC3-202ENST00000375835 ATF7IPQ6VMQ6 1270 aa20.79■□□□□ 0.92
SHC3-202ENST00000375835 FERMT1Q9BQL6 677 aa20.79■□□□□ 0.92
SHC3-202ENST00000375835 ZMYND15Q9H091 742 aa20.78■□□□□ 0.92
SHC3-202ENST00000375835 RAI14Q9P0K7 980 aa20.78■□□□□ 0.92
SHC3-202ENST00000375835 KANK3Q6NY19 840 aa20.78■□□□□ 0.92
SHC3-202ENST00000375835 HMGB1P1B2RPK0 211 aaPredicted RBP20.78■□□□□ 0.92
SHC3-202ENST00000375835 SH3BGRP55822 239 aaPredicted RBP20.78■□□□□ 0.92
SHC3-202ENST00000375835 CCDC50Q8IVM0 306 aa20.78■□□□□ 0.92
SHC3-202ENST00000375835 CCDC141Q6ZP82 1450 aa20.78■□□□□ 0.92
SHC3-202ENST00000375835 DNAJC21Q5F1R6 531 aaKnown RBP20.78■□□□□ 0.92
SHC3-202ENST00000375835 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
SHC3-202ENST00000375835 NOB1Q9ULX3 412 aaKnown RBP20.77■□□□□ 0.92
SHC3-202ENST00000375835 PIP4K2BP78356 416 aa20.77■□□□□ 0.92
SHC3-202ENST00000375835 CLCN1P35523 988 aa20.77■□□□□ 0.92
SHC3-202ENST00000375835 CCDC155Q8N6L0 562 aa20.77■□□□□ 0.92
SHC3-202ENST00000375835 NOL3O60936 208 aaKnown RBP20.77■□□□□ 0.91
SHC3-202ENST00000375835 IKBKGQ9Y6K9 419 aa20.77■□□□□ 0.91
SHC3-202ENST00000375835 URI1O94763 535 aaPredicted RBP20.76■□□□□ 0.91
SHC3-202ENST00000375835 PNISRQ8TF01 805 aaKnown RBP20.76■□□□□ 0.91
SHC3-202ENST00000375835 UBAC1Q9BSL1 405 aa20.76■□□□□ 0.91
SHC3-202ENST00000375835 RAB11FIP3O75154 756 aa20.76■□□□□ 0.91
SHC3-202ENST00000375835 CACNA2D4Q7Z3S7 1137 aa20.76■□□□□ 0.91
SHC3-202ENST00000375835 GRIPAP1Q4V328 841 aa20.76■□□□□ 0.91
SHC3-202ENST00000375835 CCDC172P0C7W6 258 aa20.76■□□□□ 0.91
SHC3-202ENST00000375835 SPECC1Q5M775 1068 aa20.76■□□□□ 0.91
SHC3-202ENST00000375835 CTAGE1Q96RT6 745 aa20.75■□□□□ 0.91
SHC3-202ENST00000375835 CETN1Q12798 172 aa20.75■□□□□ 0.91
SHC3-202ENST00000375835 ATAD2Q6PL18 1390 aa20.75■□□□□ 0.91
SHC3-202ENST00000375835 TTC12Q9H892 705 aaPredicted RBP20.75■□□□□ 0.91
SHC3-202ENST00000375835 KIF3CO14782 793 aa20.75■□□□□ 0.91
SHC3-202ENST00000375835 ZHX1Q9UKY1 873 aaPredicted RBP20.75■□□□□ 0.91
SHC3-202ENST00000375835 CEP83Q9Y592 693 aa20.75■□□□□ 0.91
SHC3-202ENST00000375835 PRPHP41219 470 aa20.74■□□□□ 0.91
SHC3-202ENST00000375835 UBE2HP62256 183 aa20.74■□□□□ 0.91
SHC3-202ENST00000375835 CUL7Q14999 1698 aa20.74■□□□□ 0.91
SHC3-202ENST00000375835 UBE4AQ14139 1066 aa20.74■□□□□ 0.91
SHC3-202ENST00000375835 NAP1L3Q99457 506 aaPredicted RBP20.74■□□□□ 0.91
SHC3-202ENST00000375835 NECTIN2Q92692 538 aa20.74■□□□□ 0.91
SHC3-202ENST00000375835 A0A1B0GUA9 196 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 SEC63Q9UGP8 760 aaKnown RBP20.73■□□□□ 0.91
SHC3-202ENST00000375835 NCOA2Q15596 1464 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 ATP2B1P20020 1258 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 AIMP1Q12904 312 aaKnown RBP20.73■□□□□ 0.91
SHC3-202ENST00000375835 TNIP1Q15025 636 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 CCDC121Q6ZUS5 278 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 TSNARE1Q96NA8 513 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 KIF4AO95239 1232 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 RBM28Q9NW13 759 aaKnown RBP20.73■□□□□ 0.91
SHC3-202ENST00000375835 EIF2AK4Q9P2K8 1649 aaKnown RBP20.73■□□□□ 0.91
SHC3-202ENST00000375835 TWISTNBQ3B726 338 aaPredicted RBP20.73■□□□□ 0.91
SHC3-202ENST00000375835 RAPGEF4Q8WZA2 1011 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 PTPN23Q9H3S7 1636 aa20.73■□□□□ 0.91
SHC3-202ENST00000375835 CTCFLQ8NI51 663 aaPredicted RBP20.72■□□□□ 0.91
SHC3-202ENST00000375835 ADAMTS8Q9UP79 889 aa20.72■□□□□ 0.91
SHC3-202ENST00000375835 MAATS1Q7Z4T9 603 aa20.72■□□□□ 0.91
SHC3-202ENST00000375835 ADCY5O95622 1261 aa20.72■□□□□ 0.91
SHC3-202ENST00000375835 JAKMIP1Q96N16 626 aaKnown RBP20.72■□□□□ 0.91
SHC3-202ENST00000375835 XPCQ01831 940 aaPredicted RBP20.72■□□□□ 0.91
SHC3-202ENST00000375835 HLTFQ14527 1009 aaKnown RBP eCLIP20.72■□□□□ 0.91
SHC3-202ENST00000375835 B4GALNT4Q76KP1 1039 aa20.72■□□□□ 0.91
SHC3-202ENST00000375835 ERBINQ96RT1 1412 aa20.72■□□□□ 0.91
SHC3-202ENST00000375835 ZFYP08048 801 aaPredicted RBP20.72■□□□□ 0.91
SHC3-202ENST00000375835 CTAGE9A4FU28 777 aa20.72■□□□□ 0.91
SHC3-202ENST00000375835 LARP1Q6PKG0 1096 aaKnown RBP20.72■□□□□ 0.91
SHC3-202ENST00000375835 EBAG9O00559 213 aa20.71■□□□□ 0.91
SHC3-202ENST00000375835 TDO2P48775 406 aa20.71■□□□□ 0.91
SHC3-202ENST00000375835 MINK1Q8N4C8 1332 aaPredicted RBP20.71■□□□□ 0.91
SHC3-202ENST00000375835 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
SHC3-202ENST00000375835 RPGRIP1LQ68CZ1 1315 aa20.71■□□□□ 0.91
SHC3-202ENST00000375835 PSME1Q06323 249 aa20.71■□□□□ 0.91
SHC3-202ENST00000375835 CCDC6Q16204 474 aa20.71■□□□□ 0.91
SHC3-202ENST00000375835 USH1CQ9Y6N9 552 aa20.71■□□□□ 0.91
SHC3-202ENST00000375835 TCP11L2Q8N4U5 519 aa20.71■□□□□ 0.91
SHC3-202ENST00000375835 BCCIPQ9P287 314 aaKnown RBP eCLIP20.7■□□□□ 0.9
SHC3-202ENST00000375835 GBP6Q6ZN66 633 aa20.7■□□□□ 0.9
SHC3-202ENST00000375835 KLHL40Q2TBA0 621 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms