RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 SYAP1Q96A49 352 aaPredicted RBP21.75■■□□□ 1.07
TUBGCP3-202ENST00000375669 ANO2Q9NQ90 1003 aa21.75■■□□□ 1.07
TUBGCP3-202ENST00000375669 POGZQ7Z3K3 1410 aa21.74■■□□□ 1.07
TUBGCP3-202ENST00000375669 RTL1A6NKG5 1358 aa21.74■■□□□ 1.07
TUBGCP3-202ENST00000375669 TRIM6-TRIM34B2RNG4 842 aa21.74■■□□□ 1.07
TUBGCP3-202ENST00000375669 TTC12Q9H892 705 aaPredicted RBP21.74■■□□□ 1.07
TUBGCP3-202ENST00000375669 PDE1AP54750 535 aa21.73■■□□□ 1.07
TUBGCP3-202ENST00000375669 UVSSAQ2YD98 709 aa21.73■■□□□ 1.07
TUBGCP3-202ENST00000375669 TAF3Q5VWG9 929 aa21.73■■□□□ 1.07
TUBGCP3-202ENST00000375669 FOXO3O43524 673 aa21.72■■□□□ 1.07
TUBGCP3-202ENST00000375669 NPM1P06748 294 aaKnown RBP eCLIP21.72■■□□□ 1.07
TUBGCP3-202ENST00000375669 RPAP2Q8IXW5 612 aaPredicted RBP21.72■■□□□ 1.07
TUBGCP3-202ENST00000375669 MAP4K4O95819 1239 aaPredicted RBP21.72■■□□□ 1.07
TUBGCP3-202ENST00000375669 PLCB2Q00722 1185 aa21.71■■□□□ 1.07
TUBGCP3-202ENST00000375669 FAM184AQ8NB25 1140 aa21.71■■□□□ 1.07
TUBGCP3-202ENST00000375669 PHF14O94880 888 aa21.71■■□□□ 1.07
TUBGCP3-202ENST00000375669 UNC5CLQ8IV45 518 aa21.71■■□□□ 1.07
TUBGCP3-202ENST00000375669 IL25Q9H293 177 aa21.71■■□□□ 1.07
TUBGCP3-202ENST00000375669 TMEM51Q9NW97 253 aa21.71■■□□□ 1.07
TUBGCP3-202ENST00000375669 ZFYVE9O95405 1425 aa21.7■■□□□ 1.06
TUBGCP3-202ENST00000375669 TXNDC2Q86VQ3 553 aa21.7■■□□□ 1.06
TUBGCP3-202ENST00000375669 COG3Q96JB2 828 aa21.7■■□□□ 1.06
TUBGCP3-202ENST00000375669 USP25Q9UHP3 1055 aa21.7■■□□□ 1.06
TUBGCP3-202ENST00000375669 U2AF2P26368 475 aaKnown RBP eCLIP21.7■■□□□ 1.061e-6■■■■□ 23.7
TUBGCP3-202ENST00000375669 ANKRD7Q92527 254 aa21.69■■□□□ 1.06
TUBGCP3-202ENST00000375669 SLC52A1Q9NWF4 448 aa21.69■■□□□ 1.06
TUBGCP3-202ENST00000375669 RGS12O14924 1447 aa21.69■■□□□ 1.06
TUBGCP3-202ENST00000375669 MAP2P11137 1827 aaKnown RBP21.69■■□□□ 1.06
TUBGCP3-202ENST00000375669 ADCY5O95622 1261 aa21.68■■□□□ 1.06
TUBGCP3-202ENST00000375669 BRD1O95696 1058 aa21.68■■□□□ 1.06
TUBGCP3-202ENST00000375669 LMOD3Q0VAK6 560 aa21.68■■□□□ 1.06
TUBGCP3-202ENST00000375669 IGSF3O75054 1194 aa21.68■■□□□ 1.06
TUBGCP3-202ENST00000375669 DIAPH3Q9NSV4 1193 aa21.68■■□□□ 1.06
TUBGCP3-202ENST00000375669 ARHGEF40Q8TER5 1519 aa21.67■■□□□ 1.06
TUBGCP3-202ENST00000375669 PNMA6EA0A0J9YXQ4 647 aa21.66■■□□□ 1.06
TUBGCP3-202ENST00000375669 USP48Q86UV5 1035 aa21.66■■□□□ 1.06
TUBGCP3-202ENST00000375669 HECW2Q9P2P5 1572 aa21.66■■□□□ 1.06
TUBGCP3-202ENST00000375669 PIK3C2BO00750 1634 aa21.66■■□□□ 1.06
TUBGCP3-202ENST00000375669 RIOK3O14730 519 aaKnown RBP21.66■■□□□ 1.06
TUBGCP3-202ENST00000375669 HSP90AB2PQ58FF8 381 aa21.66■■□□□ 1.06
TUBGCP3-202ENST00000375669 IL1RAPL2Q9NP60 686 aa21.66■■□□□ 1.06
TUBGCP3-202ENST00000375669 EIF4A2Q14240 407 aaKnown RBP21.65■■□□□ 1.06
TUBGCP3-202ENST00000375669 FEZ1Q99689 392 aa21.65■■□□□ 1.06
TUBGCP3-202ENST00000375669 ESYT1Q9BSJ8 1104 aa21.65■■□□□ 1.06
TUBGCP3-202ENST00000375669 CHAF1AQ13111 956 aaPredicted RBP21.65■■□□□ 1.06
TUBGCP3-202ENST00000375669 ZNF771Q7L3S4 317 aaPredicted RBP21.64■■□□□ 1.05
TUBGCP3-202ENST00000375669 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
TUBGCP3-202ENST00000375669 CHL1O00533 1208 aa21.64■■□□□ 1.05
TUBGCP3-202ENST00000375669 CTIFO43310 598 aaKnown RBP21.63■■□□□ 1.05
TUBGCP3-202ENST00000375669 CGNQ9P2M7 1197 aaKnown RBP21.63■■□□□ 1.05
TUBGCP3-202ENST00000375669 NAP1L2Q9ULW6 460 aaPredicted RBP21.63■■□□□ 1.05
TUBGCP3-202ENST00000375669 NUDT16Q96DE0 195 aaKnown RBP21.62■■□□□ 1.05
TUBGCP3-202ENST00000375669 OGFRQ9NZT2 677 aa21.62■■□□□ 1.05
TUBGCP3-202ENST00000375669 HCLS1P14317 486 aaPredicted RBP21.62■■□□□ 1.05
TUBGCP3-202ENST00000375669 CPA1P15085 419 aa21.62■■□□□ 1.05
TUBGCP3-202ENST00000375669 KIAA1524Q8TCG1 905 aa21.62■■□□□ 1.05
TUBGCP3-202ENST00000375669 MLECQ14165 292 aa21.61■■□□□ 1.05
TUBGCP3-202ENST00000375669 NUTM1Q86Y26 1132 aa21.61■■□□□ 1.05
TUBGCP3-202ENST00000375669 CNPY2Q9Y2B0 182 aa21.61■■□□□ 1.05
TUBGCP3-202ENST00000375669 MX1P20591 662 aa21.61■■□□□ 1.05
TUBGCP3-202ENST00000375669 WASLO00401 505 aaPredicted RBP21.6■■□□□ 1.05
TUBGCP3-202ENST00000375669 CHMLP26374 656 aa21.6■■□□□ 1.05
TUBGCP3-202ENST00000375669 YEATS2Q9ULM3 1422 aa21.6■■□□□ 1.05
TUBGCP3-202ENST00000375669 MLH3Q9UHC1 1453 aa21.6■■□□□ 1.05
TUBGCP3-202ENST00000375669 HMMRO75330 724 aa21.6■■□□□ 1.05
TUBGCP3-202ENST00000375669 DDX54Q8TDD1 881 aaKnown RBP21.59■■□□□ 1.05
TUBGCP3-202ENST00000375669 TSPYL4Q9UJ04 414 aa21.59■■□□□ 1.05
TUBGCP3-202ENST00000375669 ANKRD26Q9UPS8 1709 aa21.59■■□□□ 1.05
TUBGCP3-202ENST00000375669 LRRCC1Q9C099 1032 aa21.59■■□□□ 1.05
TUBGCP3-202ENST00000375669 DLG5Q8TDM6 1919 aa21.59■■□□□ 1.05
TUBGCP3-202ENST00000375669 KDM4AO75164 1064 aa21.58■■□□□ 1.05
TUBGCP3-202ENST00000375669 CUL4AQ13619 759 aa21.58■■□□□ 1.05
TUBGCP3-202ENST00000375669 MCM2P49736 904 aa21.58■■□□□ 1.05
TUBGCP3-202ENST00000375669 SRCIN1Q9C0H9 1055 aa21.58■■□□□ 1.05
TUBGCP3-202ENST00000375669 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
TUBGCP3-202ENST00000375669 FIBPO43427 364 aa21.57■■□□□ 1.04
TUBGCP3-202ENST00000375669 GABPB1Q06547 395 aaPredicted RBP21.57■■□□□ 1.04
TUBGCP3-202ENST00000375669 CCDC183Q5T5S1 534 aa21.57■■□□□ 1.04
TUBGCP3-202ENST00000375669 PYCARDQ9ULZ3 195 aa21.57■■□□□ 1.04
TUBGCP3-202ENST00000375669 CPS1P31327 1500 aa21.57■■□□□ 1.04
TUBGCP3-202ENST00000375669 GNAI2P04899 355 aa21.57■■□□□ 1.04
TUBGCP3-202ENST00000375669 CHMP3Q9Y3E7 222 aa21.57■■□□□ 1.04
TUBGCP3-202ENST00000375669 KIF20BQ96Q89 1820 aa21.56■■□□□ 1.04
TUBGCP3-202ENST00000375669 KCNF1Q9H3M0 494 aa21.56■■□□□ 1.04
TUBGCP3-202ENST00000375669 MCCP23508 829 aa21.56■■□□□ 1.04
TUBGCP3-202ENST00000375669 BCL11BQ9C0K0 894 aaPredicted RBP21.56■■□□□ 1.04
TUBGCP3-202ENST00000375669 ALKQ9UM73 1620 aa21.55■■□□□ 1.04
TUBGCP3-202ENST00000375669 PTPRCP08575 1304 aa21.55■■□□□ 1.04
TUBGCP3-202ENST00000375669 INTS4Q96HW7 963 aaKnown RBP21.55■■□□□ 1.04
TUBGCP3-202ENST00000375669 LRRFIP2Q9Y608 721 aaKnown RBP21.55■■□□□ 1.04
TUBGCP3-202ENST00000375669 TPM3P06753 285 aa21.55■■□□□ 1.04
TUBGCP3-202ENST00000375669 GIMAP6Q6P9H5 292 aa21.55■■□□□ 1.04
TUBGCP3-202ENST00000375669 OSBPL3Q9H4L5 887 aa21.55■■□□□ 1.04
TUBGCP3-202ENST00000375669 KIF24Q5T7B8 1368 aa21.54■■□□□ 1.04
TUBGCP3-202ENST00000375669 NCBP1Q09161 790 aaKnown RBP21.54■■□□□ 1.04
TUBGCP3-202ENST00000375669 MTHFSDQ2M296 383 aaKnown RBP21.54■■□□□ 1.04
TUBGCP3-202ENST00000375669 ZBTB22O15209 634 aa21.53■■□□□ 1.04
TUBGCP3-202ENST00000375669 SPC24Q8NBT2 197 aa21.53■■□□□ 1.04
TUBGCP3-202ENST00000375669 IPO4Q8TEX9 1081 aaKnown RBP21.53■■□□□ 1.04
TUBGCP3-202ENST00000375669 CTNNA3Q9UI47 895 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms