RNA–Protein interactions for RNA: ENST00000375323.5

APOA1-204, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-204ENST00000375323 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
APOA1-204ENST00000375323 RNMTO43148 476 aaKnown RBP20.54■□□□□ 0.88
APOA1-204ENST00000375323 MSH5O43196 834 aa20.54■□□□□ 0.88
APOA1-204ENST00000375323 AK7Q96M32 723 aa20.54■□□□□ 0.88
APOA1-204ENST00000375323 SLC4A9Q96Q91 983 aa20.54■□□□□ 0.88
APOA1-204ENST00000375323 C5P01031 1676 aa20.52■□□□□ 0.88
APOA1-204ENST00000375323 U2AF1L5P0DN76 240 aaPredicted RBP20.52■□□□□ 0.88
APOA1-204ENST00000375323 U2AF1Q01081 240 aaKnown RBP eCLIP20.52■□□□□ 0.88
APOA1-204ENST00000375323 SMIM5Q71RC9 77 aa20.52■□□□□ 0.88
APOA1-204ENST00000375323 AMIGO3Q86WK7 504 aa20.52■□□□□ 0.88
APOA1-204ENST00000375323 FLAD1Q8NFF5 587 aa20.52■□□□□ 0.88
APOA1-204ENST00000375323 RSPH6AQ9H0K4 717 aa20.52■□□□□ 0.88
APOA1-204ENST00000375323 SLC52A2Q9HAB3 445 aa20.52■□□□□ 0.88
APOA1-204ENST00000375323 TUBGCP6Q96RT7 1819 aa20.51■□□□□ 0.87
APOA1-204ENST00000375323 QSER1Q2KHR3 1735 aa20.51■□□□□ 0.87
APOA1-204ENST00000375323 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
APOA1-204ENST00000375323 PRKAR2BP31323 418 aa20.51■□□□□ 0.87
APOA1-204ENST00000375323 PHACTR3Q96KR7 559 aa20.51■□□□□ 0.87
APOA1-204ENST00000375323 ARXQ96QS3 562 aa20.51■□□□□ 0.87
APOA1-204ENST00000375323 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
APOA1-204ENST00000375323 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
APOA1-204ENST00000375323 GAS2L2Q8NHY3 880 aa20.5■□□□□ 0.87
APOA1-204ENST00000375323 C4BP0C0L5 1744 aa20.5■□□□□ 0.87
APOA1-204ENST00000375323 FHDC1Q9C0D6 1143 aaPredicted RBP20.49■□□□□ 0.87
APOA1-204ENST00000375323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.48■□□□□ 0.87
APOA1-204ENST00000375323 FCHSD2O94868 740 aa20.48■□□□□ 0.87
APOA1-204ENST00000375323 PHF14O94880 888 aa20.48■□□□□ 0.87
APOA1-204ENST00000375323 POLD1P28340 1107 aa20.48■□□□□ 0.87
APOA1-204ENST00000375323 GNAT3A8MTJ3 354 aa20.47■□□□□ 0.87
APOA1-204ENST00000375323 GNPATO15228 680 aa20.47■□□□□ 0.87
APOA1-204ENST00000375323 IL17REQ8NFR9 667 aa20.47■□□□□ 0.87
APOA1-204ENST00000375323 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
APOA1-204ENST00000375323 SCN11AQ9UI33 1791 aa20.46■□□□□ 0.87
APOA1-204ENST00000375323 SSFA2P28290 1259 aa20.46■□□□□ 0.87
APOA1-204ENST00000375323 SLC39A6Q13433 755 aa20.46■□□□□ 0.87
APOA1-204ENST00000375323 RALBP1Q15311 655 aa20.46■□□□□ 0.87
APOA1-204ENST00000375323 MSL1Q68DK7 614 aa20.46■□□□□ 0.87
APOA1-204ENST00000375323 SYT17Q9BSW7 474 aa20.46■□□□□ 0.87
APOA1-204ENST00000375323 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
APOA1-204ENST00000375323 MRC1P22897 1456 aa20.44■□□□□ 0.86
APOA1-204ENST00000375323 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
APOA1-204ENST00000375323 TEFQ10587 303 aa20.42■□□□□ 0.86
APOA1-204ENST00000375323 RTCBQ9Y3I0 505 aaKnown RBP20.42■□□□□ 0.86
APOA1-204ENST00000375323 CNTNAP4Q9C0A0 1308 aa20.42■□□□□ 0.86
APOA1-204ENST00000375323 RPS6KA4O75676 772 aa20.41■□□□□ 0.86
APOA1-204ENST00000375323 ZNF831Q5JPB2 1677 aa20.41■□□□□ 0.86
APOA1-204ENST00000375323 UBR3Q6ZT12 1888 aa20.41■□□□□ 0.86
APOA1-204ENST00000375323 CRKLP46109 303 aaKnown RBP20.4■□□□□ 0.86
APOA1-204ENST00000375323 COL24A1Q17RW2 1714 aa20.4■□□□□ 0.86
APOA1-204ENST00000375323 TRAPPC3LQ5T215 181 aa20.4■□□□□ 0.86
APOA1-204ENST00000375323 DNAJC10Q8IXB1 793 aa20.4■□□□□ 0.86
APOA1-204ENST00000375323 CEMIPQ8WUJ3 1361 aa20.39■□□□□ 0.85
APOA1-204ENST00000375323 KLHL34Q8N239 644 aa20.39■□□□□ 0.85
APOA1-204ENST00000375323 ARHGEF1Q92888 912 aaKnown RBP20.39■□□□□ 0.85
APOA1-204ENST00000375323 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
APOA1-204ENST00000375323 MYBBP1AQ9BQG0 1328 aaKnown RBP20.37■□□□□ 0.85
APOA1-204ENST00000375323 INTS5Q6P9B9 1019 aaKnown RBP20.37■□□□□ 0.85
APOA1-204ENST00000375323 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
APOA1-204ENST00000375323 PLEKHF1Q96S99 279 aa20.37■□□□□ 0.85
APOA1-204ENST00000375323 ADRA2BP18089 450 aa20.36■□□□□ 0.85
APOA1-204ENST00000375323 ZNF790Q6PG37 636 aa20.36■□□□□ 0.85
APOA1-204ENST00000375323 MCM10Q7L590 875 aa20.36■□□□□ 0.85
APOA1-204ENST00000375323 TTC5Q8N0Z6 440 aa20.36■□□□□ 0.85
APOA1-204ENST00000375323 NEFMP07197 916 aa20.35■□□□□ 0.85
APOA1-204ENST00000375323 CYP19A1P11511 503 aaPredicted RBP20.35■□□□□ 0.85
APOA1-204ENST00000375323 DCTN1Q14203 1278 aa20.35■□□□□ 0.85
APOA1-204ENST00000375323 VSIG10Q8N0Z9 540 aa20.35■□□□□ 0.85
APOA1-204ENST00000375323 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
APOA1-204ENST00000375323 KCPQ6ZWJ8 1503 aa20.35■□□□□ 0.85
APOA1-204ENST00000375323 COL5A3P25940 1745 aaPredicted RBP20.35■□□□□ 0.85
APOA1-204ENST00000375323 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
APOA1-204ENST00000375323 RFC4P35249 363 aa20.34■□□□□ 0.85
APOA1-204ENST00000375323 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
APOA1-204ENST00000375323 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
APOA1-204ENST00000375323 BTBD11A6QL63 1104 aa20.33■□□□□ 0.85
APOA1-204ENST00000375323 NLGN2Q8NFZ4 835 aa20.33■□□□□ 0.85
APOA1-204ENST00000375323 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.85
APOA1-204ENST00000375323 MYH14Q7Z406 1995 aaKnown RBP20.33■□□□□ 0.84
APOA1-204ENST00000375323 TJP1Q07157 1748 aa20.33■□□□□ 0.84
APOA1-204ENST00000375323 KCNQ3O43525 872 aa20.32■□□□□ 0.84
APOA1-204ENST00000375323 PRKRIP1Q9H875 184 aaPredicted RBP20.32■□□□□ 0.84
APOA1-204ENST00000375323 CICQ96RK0 1608 aaPredicted RBP20.31■□□□□ 0.84
APOA1-204ENST00000375323 GYS1P13807 737 aa20.31■□□□□ 0.84
APOA1-204ENST00000375323 NFE2L2Q16236 605 aa20.31■□□□□ 0.84
APOA1-204ENST00000375323 NLGN1Q8N2Q7 840 aa20.31■□□□□ 0.84
APOA1-204ENST00000375323 MMP10P09238 476 aa20.3■□□□□ 0.84
APOA1-204ENST00000375323 SRP68Q9UHB9 627 aaKnown RBP20.3■□□□□ 0.84
APOA1-204ENST00000375323 ZBTB1Q9Y2K1 713 aa20.3■□□□□ 0.84
APOA1-204ENST00000375323 CD2APQ9Y5K6 639 aa20.3■□□□□ 0.84
APOA1-204ENST00000375323 HEG1Q9ULI3 1381 aa20.3■□□□□ 0.84
APOA1-204ENST00000375323 FMNL2Q96PY5 1086 aa20.29■□□□□ 0.84
APOA1-204ENST00000375323 SOS1Q07889 1333 aaPredicted RBP20.28■□□□□ 0.84
APOA1-204ENST00000375323 MAPK8IP3Q9UPT6 1336 aa20.28■□□□□ 0.84
APOA1-204ENST00000375323 STARD3NLO95772 234 aa20.28■□□□□ 0.84
APOA1-204ENST00000375323 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
APOA1-204ENST00000375323 TEX13AQ9BXU3 409 aaPredicted RBP20.28■□□□□ 0.84
APOA1-204ENST00000375323 SIPA1L3O60292 1781 aaPredicted RBP20.28■□□□□ 0.84
APOA1-204ENST00000375323 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.84
APOA1-204ENST00000375323 UBR2Q8IWV8 1755 aa20.27■□□□□ 0.84
APOA1-204ENST00000375323 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms