RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 DDX54Q8TDD1 881 aaKnown RBP22.3■■□□□ 1.16
HLA-DMA-201ENST00000374843 ZNF772Q68DY9 489 aaPredicted RBP22.29■■□□□ 1.16
HLA-DMA-201ENST00000374843 DOT1LQ8TEK3 1739 aa22.28■■□□□ 1.16
HLA-DMA-201ENST00000374843 ZNF428Q96B54 188 aa22.28■■□□□ 1.16
HLA-DMA-201ENST00000374843 SOS1Q07889 1333 aaPredicted RBP22.28■■□□□ 1.16
HLA-DMA-201ENST00000374843 BCL9O00512 1426 aa22.26■■□□□ 1.15
HLA-DMA-201ENST00000374843 UBR2Q8IWV8 1755 aa22.26■■□□□ 1.15
HLA-DMA-201ENST00000374843 QTRT2Q9H974 415 aaKnown RBP22.26■■□□□ 1.15
HLA-DMA-201ENST00000374843 MIS18AQ9NYP9 233 aa22.26■■□□□ 1.15
HLA-DMA-201ENST00000374843 BTBD11A6QL63 1104 aa22.25■■□□□ 1.15
HLA-DMA-201ENST00000374843 MARCH10Q8NA82 808 aaPredicted RBP22.25■■□□□ 1.15
HLA-DMA-201ENST00000374843 HEG1Q9ULI3 1381 aa22.25■■□□□ 1.15
HLA-DMA-201ENST00000374843 RARSP54136 660 aaKnown RBP22.24■■□□□ 1.15
HLA-DMA-201ENST00000374843 CABP4P57796 275 aa22.24■■□□□ 1.15
HLA-DMA-201ENST00000374843 C8orf58Q8NAV2 365 aa22.24■■□□□ 1.15
HLA-DMA-201ENST00000374843 ITGB4P16144 1822 aa22.24■■□□□ 1.15
HLA-DMA-201ENST00000374843 TWISTNBQ3B726 338 aaPredicted RBP22.23■■□□□ 1.15
HLA-DMA-201ENST00000374843 TSPYL6Q8N831 410 aa22.23■■□□□ 1.15
HLA-DMA-201ENST00000374843 NFATC2IPQ8NCF5 419 aa22.23■■□□□ 1.15
HLA-DMA-201ENST00000374843 SUPT16HQ9Y5B9 1047 aaKnown RBP22.23■■□□□ 1.15
HLA-DMA-201ENST00000374843 VAMP4O75379 141 aa22.22■■□□□ 1.15
HLA-DMA-201ENST00000374843 EIF4A1P60842 406 aaKnown RBP22.22■■□□□ 1.15
HLA-DMA-201ENST00000374843 KCPQ6ZWJ8 1503 aa22.21■■□□□ 1.15
HLA-DMA-201ENST00000374843 HOXB7P09629 217 aa22.21■■□□□ 1.15
HLA-DMA-201ENST00000374843 ALDH1L2Q3SY69 923 aa22.21■■□□□ 1.15
HLA-DMA-201ENST00000374843 RRP1P56182 461 aaKnown RBP22.2■■□□□ 1.14
HLA-DMA-201ENST00000374843 KRT24Q2M2I5 525 aa22.2■■□□□ 1.14
HLA-DMA-201ENST00000374843 ZNF790Q6PG37 636 aa22.2■■□□□ 1.14
HLA-DMA-201ENST00000374843 KCNQ3O43525 872 aa22.19■■□□□ 1.14
HLA-DMA-201ENST00000374843 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
HLA-DMA-201ENST00000374843 RBM6P78332 1123 aaKnown RBP22.19■■□□□ 1.14
HLA-DMA-201ENST00000374843 TMOD3Q9NYL9 352 aa22.19■■□□□ 1.14
HLA-DMA-201ENST00000374843 NHSQ6T4R5 1651 aa22.19■■□□□ 1.14
HLA-DMA-201ENST00000374843 SEPT12Q8IYM1 358 aa22.18■■□□□ 1.14
HLA-DMA-201ENST00000374843 SSH1Q8WYL5 1049 aa22.17■■□□□ 1.14
HLA-DMA-201ENST00000374843 LAMB4A4D0S4 1761 aa22.17■■□□□ 1.14
HLA-DMA-201ENST00000374843 C5P01031 1676 aa22.17■■□□□ 1.14
HLA-DMA-201ENST00000374843 A0A0G2JS52 829 aa22.16■■□□□ 1.14
HLA-DMA-201ENST00000374843 MYT1Q01538 1121 aa22.16■■□□□ 1.14
HLA-DMA-201ENST00000374843 RGS17Q9UGC6 210 aaPredicted RBP22.16■■□□□ 1.14
HLA-DMA-201ENST00000374843 BCAR3O75815 825 aa22.15■■□□□ 1.14
HLA-DMA-201ENST00000374843 PIGBQ92521 554 aa22.15■■□□□ 1.14
HLA-DMA-201ENST00000374843 CICQ96RK0 1608 aaPredicted RBP22.15■■□□□ 1.14
HLA-DMA-201ENST00000374843 SLC39A6Q13433 755 aa22.14■■□□□ 1.13
HLA-DMA-201ENST00000374843 TTC5Q8N0Z6 440 aa22.14■■□□□ 1.13
HLA-DMA-201ENST00000374843 SMC4Q9NTJ3 1288 aa22.14■■□□□ 1.13
HLA-DMA-201ENST00000374843 BRWD3Q6RI45 1802 aa22.14■■□□□ 1.13
HLA-DMA-201ENST00000374843 KIF16BQ96L93 1317 aa22.13■■□□□ 1.13
HLA-DMA-201ENST00000374843 ELL2O00472 640 aaPredicted RBP22.13■■□□□ 1.13
HLA-DMA-201ENST00000374843 GIGYF1O75420 1035 aaPredicted RBP22.13■■□□□ 1.13
HLA-DMA-201ENST00000374843 FMNL2Q96PY5 1086 aa22.13■■□□□ 1.13
HLA-DMA-201ENST00000374843 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.12■■□□□ 1.13
HLA-DMA-201ENST00000374843 ZNF496Q96IT1 587 aaPredicted RBP22.12■■□□□ 1.13
HLA-DMA-201ENST00000374843 CHMP4AQ9BY43 222 aa22.12■■□□□ 1.13
HLA-DMA-201ENST00000374843 RGS12O14924 1447 aa22.12■■□□□ 1.13
HLA-DMA-201ENST00000374843 PRIM1P49642 420 aaKnown RBP22.11■■□□□ 1.13
HLA-DMA-201ENST00000374843 MRPL50Q8N5N7 158 aaKnown RBP22.11■■□□□ 1.13
HLA-DMA-201ENST00000374843 BCL2L13Q9BXK5 485 aa22.1■■□□□ 1.13
HLA-DMA-201ENST00000374843 ATG3Q9NT62 314 aa22.1■■□□□ 1.13
HLA-DMA-201ENST00000374843 SBF2Q86WG5 1849 aa22.1■■□□□ 1.13
HLA-DMA-201ENST00000374843 NEFLP07196 543 aa22.09■■□□□ 1.13
HLA-DMA-201ENST00000374843 CCDC30Q5VVM6 783 aa22.09■■□□□ 1.13
HLA-DMA-201ENST00000374843 ZNF831Q5JPB2 1677 aa22.08■■□□□ 1.13
HLA-DMA-201ENST00000374843 SNRPA1P09661 255 aaKnown RBP22.08■■□□□ 1.13
HLA-DMA-201ENST00000374843 RXRBP28702 533 aa22.08■■□□□ 1.13
HLA-DMA-201ENST00000374843 HDGFL1Q5TGJ6 251 aa22.08■■□□□ 1.13
HLA-DMA-201ENST00000374843 CACNA1FO60840 1977 aa22.08■■□□□ 1.12
HLA-DMA-201ENST00000374843 ASAP1Q9ULH1 1129 aa22.07■■□□□ 1.12
HLA-DMA-201ENST00000374843 TJP1Q07157 1748 aa22.06■■□□□ 1.12
HLA-DMA-201ENST00000374843 BTAF1O14981 1849 aa22.06■■□□□ 1.12
HLA-DMA-201ENST00000374843 POTEAQ6S8J7 498 aa22.06■■□□□ 1.12
HLA-DMA-201ENST00000374843 KRT27Q7Z3Y8 459 aa22.06■■□□□ 1.12
HLA-DMA-201ENST00000374843 VSIG10Q8N0Z9 540 aa22.06■■□□□ 1.12
HLA-DMA-201ENST00000374843 SYTL4Q96C24 671 aaPredicted RBP22.06■■□□□ 1.12
HLA-DMA-201ENST00000374843 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
HLA-DMA-201ENST00000374843 PLIN1O60240 522 aa22.05■■□□□ 1.12
HLA-DMA-201ENST00000374843 PDE3AQ14432 1141 aa22.05■■□□□ 1.12
HLA-DMA-201ENST00000374843 ARHGAP45Q92619 1136 aa22.05■■□□□ 1.12
HLA-DMA-201ENST00000374843 ZKSCAN2Q63HK3 967 aa22.04■■□□□ 1.12
HLA-DMA-201ENST00000374843 ILDR1Q86SU0 546 aaPredicted RBP22.04■■□□□ 1.12
HLA-DMA-201ENST00000374843 STK31Q9BXU1 1019 aa22.04■■□□□ 1.12
HLA-DMA-201ENST00000374843 ERBB4Q15303 1308 aa22.04■■□□□ 1.12
HLA-DMA-201ENST00000374843 PRAMEF22A3QJZ6 481 aa22.03■■□□□ 1.12
HLA-DMA-201ENST00000374843 IPO8O15397 1037 aaKnown RBP22.03■■□□□ 1.12
HLA-DMA-201ENST00000374843 KCNQ2O43526 872 aa22.03■■□□□ 1.12
HLA-DMA-201ENST00000374843 SMARCC1Q92922 1105 aaPredicted RBP22.03■■□□□ 1.12
HLA-DMA-201ENST00000374843 PTPRCP08575 1304 aa22.03■■□□□ 1.12
HLA-DMA-201ENST00000374843 PALLDQ8WX93 1383 aa22.02■■□□□ 1.12
HLA-DMA-201ENST00000374843 CANXP27824 592 aaKnown RBP22.02■■□□□ 1.12
HLA-DMA-201ENST00000374843 ATF7IPQ6VMQ6 1270 aa22.02■■□□□ 1.12
HLA-DMA-201ENST00000374843 FAM196AQ6ZSG2 479 aa22.02■■□□□ 1.12
HLA-DMA-201ENST00000374843 NOB1Q9ULX3 412 aaKnown RBP22.02■■□□□ 1.12
HLA-DMA-201ENST00000374843 TCERG1O14776 1098 aaKnown RBP22.01■■□□□ 1.11
HLA-DMA-201ENST00000374843 TRIM27P14373 513 aa22.01■■□□□ 1.11
HLA-DMA-201ENST00000374843 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
HLA-DMA-201ENST00000374843 FRAT1Q92837 279 aaPredicted RBP22.01■■□□□ 1.11
HLA-DMA-201ENST00000374843 RREB1Q92766 1687 aa22.01■■□□□ 1.11
HLA-DMA-201ENST00000374843 PTCD1O75127 700 aaKnown RBP22■■□□□ 1.11
HLA-DMA-201ENST00000374843 SLC4A2P04920 1241 aa22■■□□□ 1.11
HLA-DMA-201ENST00000374843 MS4A1P11836 297 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms