RNA–Protein interactions for RNA: ENST00000374737.8

VSIG4-201, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG4, Length 1,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-201ENST00000374737 KCNQ3O43525 872 aa11.8□□□□□ -0.52
VSIG4-201ENST00000374737 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
VSIG4-201ENST00000374737 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
VSIG4-201ENST00000374737 ZNF521Q96K83 1311 aa11.8□□□□□ -0.52
VSIG4-201ENST00000374737 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
VSIG4-201ENST00000374737 WDR63Q8IWG1 891 aa11.79□□□□□ -0.52
VSIG4-201ENST00000374737 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
VSIG4-201ENST00000374737 TOGARAM1Q9Y4F4 1720 aa11.79□□□□□ -0.52
VSIG4-201ENST00000374737 CALD1Q05682 793 aaKnown RBP11.79□□□□□ -0.52
VSIG4-201ENST00000374737 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
VSIG4-201ENST00000374737 BCL11BQ9C0K0 894 aaPredicted RBP11.79□□□□□ -0.52
VSIG4-201ENST00000374737 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
VSIG4-201ENST00000374737 ZBED9Q6R2W3 1325 aa11.78□□□□□ -0.52
VSIG4-201ENST00000374737 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
VSIG4-201ENST00000374737 DOT1LQ8TEK3 1739 aa11.78□□□□□ -0.52
VSIG4-201ENST00000374737 SCN11AQ9UI33 1791 aa11.78□□□□□ -0.52
VSIG4-201ENST00000374737 BCL9O00512 1426 aa11.78□□□□□ -0.52
VSIG4-201ENST00000374737 CHL1O00533 1208 aa11.77□□□□□ -0.52
VSIG4-201ENST00000374737 PTCD1O75127 700 aaKnown RBP11.77□□□□□ -0.52
VSIG4-201ENST00000374737 GNAI1P63096 354 aa11.77□□□□□ -0.52
VSIG4-201ENST00000374737 MBIPQ9NS73 344 aa11.77□□□□□ -0.52
VSIG4-201ENST00000374737 IFT57Q9NWB7 429 aa11.77□□□□□ -0.52
VSIG4-201ENST00000374737 APBA3O96018 575 aa11.76□□□□□ -0.53
VSIG4-201ENST00000374737 ZNF853P0CG23 659 aa11.76□□□□□ -0.53
VSIG4-201ENST00000374737 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
VSIG4-201ENST00000374737 TTC5Q8N0Z6 440 aa11.76□□□□□ -0.53
VSIG4-201ENST00000374737 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
VSIG4-201ENST00000374737 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
VSIG4-201ENST00000374737 SLFN5Q08AF3 891 aa11.76□□□□□ -0.53
VSIG4-201ENST00000374737 KRT24Q2M2I5 525 aa11.76□□□□□ -0.53
VSIG4-201ENST00000374737 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
VSIG4-201ENST00000374737 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
VSIG4-201ENST00000374737 ITGB4P16144 1822 aa11.75□□□□□ -0.53
VSIG4-201ENST00000374737 IL16Q14005 1332 aa11.75□□□□□ -0.53
VSIG4-201ENST00000374737 KCNQ4P56696 695 aa11.75□□□□□ -0.53
VSIG4-201ENST00000374737 MRC1P22897 1456 aa11.75□□□□□ -0.53
VSIG4-201ENST00000374737 FANCIQ9NVI1 1328 aa11.74□□□□□ -0.53
VSIG4-201ENST00000374737 E9PSI1 815 aa11.74□□□□□ -0.53
VSIG4-201ENST00000374737 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
VSIG4-201ENST00000374737 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
VSIG4-201ENST00000374737 SBF2Q86WG5 1849 aa11.74□□□□□ -0.53
VSIG4-201ENST00000374737 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
VSIG4-201ENST00000374737 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
VSIG4-201ENST00000374737 EXOSC9Q06265 439 aaKnown RBP11.73□□□□□ -0.53
VSIG4-201ENST00000374737 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
VSIG4-201ENST00000374737 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
VSIG4-201ENST00000374737 PALLDQ8WX93 1383 aa11.73□□□□□ -0.53
VSIG4-201ENST00000374737 DUSP27Q5VZP5 1158 aa11.72□□□□□ -0.53
VSIG4-201ENST00000374737 DEFB132Q7Z7B7 95 aa11.72□□□□□ -0.53
VSIG4-201ENST00000374737 TSPYL6Q8N831 410 aa11.72□□□□□ -0.53
VSIG4-201ENST00000374737 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
VSIG4-201ENST00000374737 SMARCC1Q92922 1105 aaPredicted RBP11.72□□□□□ -0.53
VSIG4-201ENST00000374737 SLC4A9Q96Q91 983 aa11.72□□□□□ -0.53
VSIG4-201ENST00000374737 NHSQ6T4R5 1651 aa11.72□□□□□ -0.53
VSIG4-201ENST00000374737 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
VSIG4-201ENST00000374737 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
VSIG4-201ENST00000374737 TRMT2AQ8IZ69 625 aaKnown RBP11.72□□□□□ -0.53
VSIG4-201ENST00000374737 FMNL2Q96PY5 1086 aa11.72□□□□□ -0.53
VSIG4-201ENST00000374737 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.53
VSIG4-201ENST00000374737 BTAF1O14981 1849 aa11.71□□□□□ -0.54
VSIG4-201ENST00000374737 LOC102724428A0A0B4J2F2 783 aa11.71□□□□□ -0.54
VSIG4-201ENST00000374737 SIK1P57059 783 aa11.71□□□□□ -0.54
VSIG4-201ENST00000374737 NECTIN2Q92692 538 aa11.71□□□□□ -0.54
VSIG4-201ENST00000374737 UPF1Q92900 1129 aaKnown RBP eCLIP11.71□□□□□ -0.54
VSIG4-201ENST00000374737 EIF2S2P20042 333 aaKnown RBP11.7□□□□□ -0.54
VSIG4-201ENST00000374737 PROM2Q8N271 834 aa11.7□□□□□ -0.54
VSIG4-201ENST00000374737 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
VSIG4-201ENST00000374737 USP16Q9Y5T5 823 aa11.7□□□□□ -0.54
VSIG4-201ENST00000374737 PLSCR1O15162 318 aa11.7□□□□□ -0.54
VSIG4-201ENST00000374737 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
VSIG4-201ENST00000374737 SNRPA1P09661 255 aaKnown RBP11.7□□□□□ -0.54
VSIG4-201ENST00000374737 EZH2Q15910 746 aaKnown RBP11.7□□□□□ -0.54
VSIG4-201ENST00000374737 DNAJC10Q8IXB1 793 aa11.7□□□□□ -0.54
VSIG4-201ENST00000374737 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
VSIG4-201ENST00000374737 ITPK1Q13572 414 aa11.69□□□□□ -0.54
VSIG4-201ENST00000374737 TXNRD1Q16881 649 aa11.69□□□□□ -0.54
VSIG4-201ENST00000374737 TWISTNBQ3B726 338 aaPredicted RBP11.69□□□□□ -0.54
VSIG4-201ENST00000374737 LRRC4BQ9NT99 713 aa11.69□□□□□ -0.54
VSIG4-201ENST00000374737 HEG1Q9ULI3 1381 aa11.69□□□□□ -0.54
VSIG4-201ENST00000374737 KCPQ6ZWJ8 1503 aa11.68□□□□□ -0.54
VSIG4-201ENST00000374737 BAG6P46379 1132 aa11.68□□□□□ -0.54
VSIG4-201ENST00000374737 KDM3BQ7LBC6 1761 aa11.68□□□□□ -0.54
VSIG4-201ENST00000374737 VAMP4O75379 141 aa11.67□□□□□ -0.54
VSIG4-201ENST00000374737 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
VSIG4-201ENST00000374737 CCDC125Q86Z20 511 aa11.67□□□□□ -0.54
VSIG4-201ENST00000374737 CAMKK2Q96RR4 588 aa11.67□□□□□ -0.54
VSIG4-201ENST00000374737 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
VSIG4-201ENST00000374737 PAPPAQ13219 1627 aa11.66□□□□□ -0.54
VSIG4-201ENST00000374737 A1BGP04217 495 aa11.66□□□□□ -0.54
VSIG4-201ENST00000374737 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
VSIG4-201ENST00000374737 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
VSIG4-201ENST00000374737 TNS1Q9HBL0 1735 aaKnown RBP11.66□□□□□ -0.54
VSIG4-201ENST00000374737 CYP19A1P11511 503 aaPredicted RBP11.65□□□□□ -0.54
VSIG4-201ENST00000374737 SLC27A3Q5K4L6 730 aa11.65□□□□□ -0.54
VSIG4-201ENST00000374737 SMIM5Q71RC9 77 aa11.65□□□□□ -0.54
VSIG4-201ENST00000374737 STARD3NLO95772 234 aa11.65□□□□□ -0.55
VSIG4-201ENST00000374737 ANXA1P04083 346 aa11.65□□□□□ -0.55
VSIG4-201ENST00000374737 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.55
VSIG4-201ENST00000374737 BCL2L13Q9BXK5 485 aa11.65□□□□□ -0.55
VSIG4-201ENST00000374737 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms