RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 ZNF530Q6P9A1 599 aaPredicted RBP21■□□□□ 0.95
PHF1-202ENST00000374516 LNPKQ9C0E8 428 aa21■□□□□ 0.95
PHF1-202ENST00000374516 PTPRCP08575 1304 aa21■□□□□ 0.95
PHF1-202ENST00000374516 KIF1AQ12756 1690 aa20.99■□□□□ 0.95
PHF1-202ENST00000374516 DDX11L8A8MPP1 907 aa20.99■□□□□ 0.95
PHF1-202ENST00000374516 F6X3S4 739 aa20.99■□□□□ 0.95
PHF1-202ENST00000374516 MPRIPQ6WCQ1 1025 aa20.99■□□□□ 0.95
PHF1-202ENST00000374516 SLC4A10Q6U841 1118 aa20.98■□□□□ 0.95
PHF1-202ENST00000374516 DDIT3P35638 169 aa20.98■□□□□ 0.95
PHF1-202ENST00000374516 NUCB1Q02818 461 aa20.98■□□□□ 0.95
PHF1-202ENST00000374516 PLEKHO1Q53GL0 409 aaPredicted RBP20.98■□□□□ 0.95
PHF1-202ENST00000374516 STK31Q9BXU1 1019 aa20.98■□□□□ 0.95
PHF1-202ENST00000374516 DCCP43146 1447 aa20.97■□□□□ 0.95
PHF1-202ENST00000374516 ANKRD45Q5TZF3 282 aa20.96■□□□□ 0.95
PHF1-202ENST00000374516 GRPEL1Q9HAV7 217 aa20.96■□□□□ 0.95
PHF1-202ENST00000374516 LRRC37A3O60309 1634 aa20.96■□□□□ 0.95
PHF1-202ENST00000374516 PHRF1Q9P1Y6 1649 aaKnown RBP20.96■□□□□ 0.95
PHF1-202ENST00000374516 NPHP3Q7Z494 1330 aa20.96■□□□□ 0.95
PHF1-202ENST00000374516 RBM25P49756 843 aaKnown RBP20.96■□□□□ 0.95
PHF1-202ENST00000374516 CEMIPQ8WUJ3 1361 aa20.96■□□□□ 0.95
PHF1-202ENST00000374516 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
PHF1-202ENST00000374516 CHD1LQ86WJ1 897 aa20.95■□□□□ 0.94
PHF1-202ENST00000374516 SNX21Q969T3 373 aa20.95■□□□□ 0.94
PHF1-202ENST00000374516 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.94
PHF1-202ENST00000374516 MED1Q15648 1581 aaPredicted RBP20.95■□□□□ 0.94
PHF1-202ENST00000374516 AKAP4Q5JQC9 854 aa20.95■□□□□ 0.94
PHF1-202ENST00000374516 ISY1Q9ULR0 285 aaKnown RBP20.95■□□□□ 0.94
PHF1-202ENST00000374516 ERBB3P21860 1342 aa20.94■□□□□ 0.94
PHF1-202ENST00000374516 NAP1L5Q96NT1 182 aaPredicted RBP20.94■□□□□ 0.94
PHF1-202ENST00000374516 MEIS3Q99687 375 aa20.94■□□□□ 0.94
PHF1-202ENST00000374516 KCNQ3O43525 872 aa20.94■□□□□ 0.94
PHF1-202ENST00000374516 CHRNA2Q15822 529 aa20.94■□□□□ 0.94
PHF1-202ENST00000374516 TEFQ10587 303 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 AMOTQ4VCS5 1084 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 C1orf141Q5JVX7 400 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 GCC1Q96CN9 775 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 BABAM1Q9NWV8 329 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 LMTK3Q96Q04 1460 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 ZNF335Q9H4Z2 1342 aaPredicted RBP20.93■□□□□ 0.94
PHF1-202ENST00000374516 FLIIQ13045 1269 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 NLRP2Q9NX02 1062 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 ALS2Q96Q42 1657 aa20.93■□□□□ 0.94
PHF1-202ENST00000374516 FKBP5Q13451 457 aaPredicted RBP20.92■□□□□ 0.94
PHF1-202ENST00000374516 EIF2S2P20042 333 aaKnown RBP20.92■□□□□ 0.94
PHF1-202ENST00000374516 PXDNQ92626 1479 aa20.91■□□□□ 0.94
PHF1-202ENST00000374516 HDGFL1Q5TGJ6 251 aa20.91■□□□□ 0.94
PHF1-202ENST00000374516 TNPO1Q92973 898 aaKnown RBP20.91■□□□□ 0.94
PHF1-202ENST00000374516 RGPD5Q99666 1765 aa20.9■□□□□ 0.94
PHF1-202ENST00000374516 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
PHF1-202ENST00000374516 BRINP3Q76B58 766 aa20.9■□□□□ 0.94
PHF1-202ENST00000374516 EIF4A1P60842 406 aaKnown RBP20.9■□□□□ 0.94
PHF1-202ENST00000374516 RNMTO43148 476 aaKnown RBP20.89■□□□□ 0.94
PHF1-202ENST00000374516 CIZ1Q9ULV3 898 aaPredicted RBP20.89■□□□□ 0.94
PHF1-202ENST00000374516 SPATA31A3Q5VYP0 1347 aa20.89■□□□□ 0.93
PHF1-202ENST00000374516 CSB-PGBD3P0DP91 1061 aa20.89■□□□□ 0.93
PHF1-202ENST00000374516 NCAPD2Q15021 1401 aa20.88■□□□□ 0.93
PHF1-202ENST00000374516 TNS3Q68CZ2 1445 aa20.88■□□□□ 0.93
PHF1-202ENST00000374516 CEP85Q6P2H3 762 aa20.88■□□□□ 0.93
PHF1-202ENST00000374516 PHAXQ9H814 394 aaKnown RBP20.88■□□□□ 0.93
PHF1-202ENST00000374516 ESPNB1AK53 854 aa20.87■□□□□ 0.93
PHF1-202ENST00000374516 CCT4P50991 539 aaKnown RBP20.87■□□□□ 0.93
PHF1-202ENST00000374516 ANKRD44Q8N8A2 993 aa20.87■□□□□ 0.93
PHF1-202ENST00000374516 STRCQ7RTU9 1775 aa20.87■□□□□ 0.93
PHF1-202ENST00000374516 RAPGEF4Q8WZA2 1011 aa20.87■□□□□ 0.93
PHF1-202ENST00000374516 HSP90AB1P08238 724 aaKnown RBP20.86■□□□□ 0.93
PHF1-202ENST00000374516 RAB3GAP1Q15042 981 aa20.86■□□□□ 0.93
PHF1-202ENST00000374516 GBP4Q96PP9 640 aa20.86■□□□□ 0.93
PHF1-202ENST00000374516 SLAIN2Q9P270 581 aa20.86■□□□□ 0.93
PHF1-202ENST00000374516 ATP10DQ9P241 1426 aa20.86■□□□□ 0.93
PHF1-202ENST00000374516 GAS2L3Q86XJ1 694 aa20.86■□□□□ 0.93
PHF1-202ENST00000374516 RPAP2Q8IXW5 612 aaPredicted RBP20.86■□□□□ 0.93
PHF1-202ENST00000374516 DCTPP1Q9H773 170 aa20.86■□□□□ 0.93
PHF1-202ENST00000374516 APBB1O00213 710 aa20.85■□□□□ 0.93
PHF1-202ENST00000374516 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
PHF1-202ENST00000374516 SOS1Q07889 1333 aaPredicted RBP20.85■□□□□ 0.93
PHF1-202ENST00000374516 SKOR2Q2VWA4 1001 aaPredicted RBP20.84■□□□□ 0.93
PHF1-202ENST00000374516 BMP2KLQ5H9B9 411 aa20.84■□□□□ 0.93
PHF1-202ENST00000374516 KIF2CQ99661 725 aa20.84■□□□□ 0.93
PHF1-202ENST00000374516 ANXA1P04083 346 aa20.83■□□□□ 0.93
PHF1-202ENST00000374516 HSP90AA1P07900 732 aaKnown RBP20.83■□□□□ 0.93
PHF1-202ENST00000374516 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.93
PHF1-202ENST00000374516 LMO7Q8WWI1 1683 aa20.83■□□□□ 0.93
PHF1-202ENST00000374516 ERBB4Q15303 1308 aa20.83■□□□□ 0.92
PHF1-202ENST00000374516 FAM208AQ9UK61 1670 aaKnown RBP20.82■□□□□ 0.92
PHF1-202ENST00000374516 TATP17735 454 aaPredicted RBP20.81■□□□□ 0.92
PHF1-202ENST00000374516 C16orf71Q8IYS4 520 aaPredicted RBP20.81■□□□□ 0.92
PHF1-202ENST00000374516 TRIM44Q96DX7 344 aaPredicted RBP20.81■□□□□ 0.92
PHF1-202ENST00000374516 PRAMEF22A3QJZ6 481 aa20.81■□□□□ 0.92
PHF1-202ENST00000374516 PTMSP20962 102 aa20.81■□□□□ 0.92
PHF1-202ENST00000374516 CAMTA1Q9Y6Y1 1673 aa20.8■□□□□ 0.92
PHF1-202ENST00000374516 GNAI2P04899 355 aa20.79■□□□□ 0.92
PHF1-202ENST00000374516 SMARCA5O60264 1052 aaPredicted RBP20.79■□□□□ 0.92
PHF1-202ENST00000374516 CD2BP2O95400 341 aaKnown RBP20.79■□□□□ 0.92
PHF1-202ENST00000374516 HSP90AA2PQ14568 343 aaPredicted RBP20.79■□□□□ 0.92
PHF1-202ENST00000374516 GLIPR1L2Q4G1C9 344 aa20.79■□□□□ 0.92
PHF1-202ENST00000374516 MEGF6O75095 1541 aa20.78■□□□□ 0.92
PHF1-202ENST00000374516 RRP9O43818 475 aaKnown RBP20.78■□□□□ 0.92
PHF1-202ENST00000374516 HOXB7P09629 217 aa20.78■□□□□ 0.92
PHF1-202ENST00000374516 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
PHF1-202ENST00000374516 K7ELQ4 463 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms