RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
SNX30-201ENST00000374232 BMP2KQ9NSY1 1161 aaPredicted RBP16.98■□□□□ 0.31
SNX30-201ENST00000374232 GCC1Q96CN9 775 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 MCM4P33991 863 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 AFAP1Q8N556 730 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 SRCIN1Q9C0H9 1055 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 GPRASP1Q5JY77 1395 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 SSFA2P28290 1259 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 PPARDQ03181 441 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
SNX30-201ENST00000374232 CGNQ9P2M7 1197 aaKnown RBP16.97■□□□□ 0.31
SNX30-201ENST00000374232 ESPNB1AK53 854 aa16.97■□□□□ 0.31
SNX30-201ENST00000374232 EIF3JO75822 258 aaKnown RBP16.97■□□□□ 0.31
SNX30-201ENST00000374232 TAF4BQ92750 862 aa16.97■□□□□ 0.31
SNX30-201ENST00000374232 DACH1Q9UI36 760 aa16.97■□□□□ 0.31
SNX30-201ENST00000374232 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
SNX30-201ENST00000374232 COMMD10Q9Y6G5 202 aa16.97■□□□□ 0.31
SNX30-201ENST00000374232 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
SNX30-201ENST00000374232 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
SNX30-201ENST00000374232 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
SNX30-201ENST00000374232 GTF2F1P35269 517 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNX30-201ENST00000374232 ERLIN1O75477 346 aa16.96■□□□□ 0.31
SNX30-201ENST00000374232 PRPF4BQ13523 1007 aaKnown RBP16.96■□□□□ 0.31
SNX30-201ENST00000374232 GIMAP7Q8NHV1 300 aa16.96■□□□□ 0.31
SNX30-201ENST00000374232 UBXN4Q92575 508 aa16.96■□□□□ 0.31
SNX30-201ENST00000374232 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
SNX30-201ENST00000374232 MIA2Q96PC5 1412 aa16.96■□□□□ 0.31
SNX30-201ENST00000374232 MTERF4Q7Z6M4 381 aaKnown RBP16.96■□□□□ 0.3
SNX30-201ENST00000374232 DRC1Q96MC2 740 aa16.96■□□□□ 0.3
SNX30-201ENST00000374232 CBFA2T2O43439 604 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 CCDC96Q2M329 555 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 AIDAQ96BJ3 306 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 MYD88Q99836 296 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 MAP3K11Q16584 847 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 USP8P40818 1118 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 METTL24Q5JXM2 366 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNX30-201ENST00000374232 TMCO5BA8MYB1 307 aa16.95■□□□□ 0.3
SNX30-201ENST00000374232 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
SNX30-201ENST00000374232 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 POLR3DP05423 398 aaPredicted RBP16.94■□□□□ 0.3
SNX30-201ENST00000374232 GSTTP1A0A1W2PQM5 241 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
SNX30-201ENST00000374232 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 PTPRGP23470 1445 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 MCM2P49736 904 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 IFFO1Q0D2I5 559 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 GRM1Q13255 1194 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 ANKRD1Q15327 319 aa16.94■□□□□ 0.3
SNX30-201ENST00000374232 PTPN14Q15678 1187 aa16.93■□□□□ 0.3
SNX30-201ENST00000374232 CACNA2D4Q7Z3S7 1137 aa16.93■□□□□ 0.3
SNX30-201ENST00000374232 CLIP2Q9UDT6 1046 aa16.93■□□□□ 0.3
SNX30-201ENST00000374232 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
SNX30-201ENST00000374232 CRACR2AQ9BSW2 395 aa16.93■□□□□ 0.3
SNX30-201ENST00000374232 HAND2P61296 217 aa16.93■□□□□ 0.3
SNX30-201ENST00000374232 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
SNX30-201ENST00000374232 TDRD12Q587J7 1177 aaKnown RBP16.92■□□□□ 0.3
SNX30-201ENST00000374232 ANKIB1Q9P2G1 1089 aa16.92■□□□□ 0.3
SNX30-201ENST00000374232 CRACR2BQ8N4Y2 399 aaPredicted RBP16.92■□□□□ 0.3
SNX30-201ENST00000374232 PRKCSHP14314 528 aaPredicted RBP16.92■□□□□ 0.3
SNX30-201ENST00000374232 CCDC91Q7Z6B0 441 aa16.92■□□□□ 0.3
SNX30-201ENST00000374232 CEP63Q96MT8 703 aa16.92■□□□□ 0.3
SNX30-201ENST00000374232 TRIM21P19474 475 aaKnown RBP16.92■□□□□ 0.3
SNX30-201ENST00000374232 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
SNX30-201ENST00000374232 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
SNX30-201ENST00000374232 FAM170AA1A519 330 aa16.91■□□□□ 0.3
SNX30-201ENST00000374232 PPP4R3BQ5MIZ7 849 aa16.91■□□□□ 0.3
SNX30-201ENST00000374232 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
SNX30-201ENST00000374232 ZNF397Q8NF99 534 aaPredicted RBP16.91■□□□□ 0.3
SNX30-201ENST00000374232 GPTP24298 496 aa16.91■□□□□ 0.3
SNX30-201ENST00000374232 SEC63Q9UGP8 760 aaKnown RBP16.91■□□□□ 0.3
SNX30-201ENST00000374232 SPA17Q15506 151 aa16.9■□□□□ 0.3
SNX30-201ENST00000374232 TMC6Q7Z403 805 aa16.9■□□□□ 0.3
SNX30-201ENST00000374232 IMMTQ16891 758 aaKnown RBP16.9■□□□□ 0.3
SNX30-201ENST00000374232 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
SNX30-201ENST00000374232 LUZP1Q86V48 1076 aa16.9■□□□□ 0.3
SNX30-201ENST00000374232 CEP126Q9P2H0 1117 aa16.9■□□□□ 0.3
SNX30-201ENST00000374232 RGS22Q8NE09 1264 aa16.9■□□□□ 0.3
SNX30-201ENST00000374232 INCENPQ9NQS7 918 aa16.9■□□□□ 0.3
SNX30-201ENST00000374232 HLTFQ14527 1009 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNX30-201ENST00000374232 SNRKQ9NRH2 765 aa16.89■□□□□ 0.29
SNX30-201ENST00000374232 NACADO15069 1562 aa16.89■□□□□ 0.29
SNX30-201ENST00000374232 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
SNX30-201ENST00000374232 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
SNX30-201ENST00000374232 TOP1P11387 765 aaKnown RBP16.88■□□□□ 0.29
SNX30-201ENST00000374232 PAIP2Q9BPZ3 127 aaKnown RBP16.88■□□□□ 0.29
SNX30-201ENST00000374232 SMC1AQ14683 1233 aaKnown RBP16.88■□□□□ 0.29
SNX30-201ENST00000374232 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
SNX30-201ENST00000374232 MPRIPQ6WCQ1 1025 aa16.88■□□□□ 0.29
SNX30-201ENST00000374232 SMTNL1A8MU46 457 aa16.88■□□□□ 0.29
SNX30-201ENST00000374232 MYO1BO43795 1136 aa16.88■□□□□ 0.29
SNX30-201ENST00000374232 IGSF3O75054 1194 aa16.88■□□□□ 0.29
SNX30-201ENST00000374232 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNX30-201ENST00000374232 V9GYY5 206 aaPredicted RBP16.88■□□□□ 0.29
SNX30-201ENST00000374232 CTNNA2P26232 953 aa16.87■□□□□ 0.29
SNX30-201ENST00000374232 TCERG1LQ5VWI1 586 aa16.87■□□□□ 0.29
SNX30-201ENST00000374232 IQCEQ6IPM2 695 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms