RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 GBP4Q96PP9 640 aa18.64■□□□□ 0.57
UBXN11-204ENST00000374217 LMO7Q8WWI1 1683 aa18.64■□□□□ 0.57
UBXN11-204ENST00000374217 RGPD2P0DJD1 1756 aa18.64■□□□□ 0.57
UBXN11-204ENST00000374217 COL5A2P05997 1499 aaPredicted RBP18.64■□□□□ 0.57
UBXN11-204ENST00000374217 PANK2Q9BZ23 570 aa18.63■□□□□ 0.57
UBXN11-204ENST00000374217 FAM208AQ9UK61 1670 aaKnown RBP18.63■□□□□ 0.57
UBXN11-204ENST00000374217 RBM25P49756 843 aaKnown RBP18.63■□□□□ 0.57
UBXN11-204ENST00000374217 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
UBXN11-204ENST00000374217 TRIM44Q96DX7 344 aaPredicted RBP18.63■□□□□ 0.57
UBXN11-204ENST00000374217 SMC5Q8IY18 1101 aa18.62■□□□□ 0.57
UBXN11-204ENST00000374217 IBTKQ9P2D0 1353 aaPredicted RBP18.62■□□□□ 0.57
UBXN11-204ENST00000374217 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
UBXN11-204ENST00000374217 GAS2L2Q8NHY3 880 aa18.61■□□□□ 0.57
UBXN11-204ENST00000374217 TERF1P54274 439 aa18.6■□□□□ 0.57
UBXN11-204ENST00000374217 ZKSCAN2Q63HK3 967 aa18.6■□□□□ 0.57
UBXN11-204ENST00000374217 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
UBXN11-204ENST00000374217 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
UBXN11-204ENST00000374217 RLBP1P12271 317 aa18.59■□□□□ 0.57
UBXN11-204ENST00000374217 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
UBXN11-204ENST00000374217 PLEKHO1Q53GL0 409 aaPredicted RBP18.59■□□□□ 0.57
UBXN11-204ENST00000374217 MEX3CQ5U5Q3 659 aaKnown RBP18.59■□□□□ 0.57
UBXN11-204ENST00000374217 NGLY1Q96IV0 654 aa18.59■□□□□ 0.57
UBXN11-204ENST00000374217 NCAPD2Q15021 1401 aa18.58■□□□□ 0.57
UBXN11-204ENST00000374217 AMOTQ4VCS5 1084 aa18.58■□□□□ 0.57
UBXN11-204ENST00000374217 C8orf37Q96NL8 207 aa18.58■□□□□ 0.57
UBXN11-204ENST00000374217 CARD10Q9BWT7 1032 aa18.58■□□□□ 0.57
UBXN11-204ENST00000374217 KIF16BQ96L93 1317 aa18.58■□□□□ 0.57
UBXN11-204ENST00000374217 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
UBXN11-204ENST00000374217 GZF1Q9H116 711 aaPredicted RBP18.58■□□□□ 0.56
UBXN11-204ENST00000374217 DDX19BQ9UMR2 479 aa18.58■□□□□ 0.56
UBXN11-204ENST00000374217 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
UBXN11-204ENST00000374217 CRB1P82279 1406 aa18.57■□□□□ 0.56
UBXN11-204ENST00000374217 CCDC173Q0VFZ6 552 aa18.57■□□□□ 0.56
UBXN11-204ENST00000374217 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
UBXN11-204ENST00000374217 PDCL3Q9H2J4 239 aa18.56■□□□□ 0.56
UBXN11-204ENST00000374217 PLCH1Q4KWH8 1693 aa18.56■□□□□ 0.56
UBXN11-204ENST00000374217 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
UBXN11-204ENST00000374217 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
UBXN11-204ENST00000374217 MFAP1P55081 439 aaKnown RBP18.55■□□□□ 0.56
UBXN11-204ENST00000374217 RAB3GAP1Q15042 981 aa18.55■□□□□ 0.56
UBXN11-204ENST00000374217 CLEC17AQ6ZS10 378 aa18.55■□□□□ 0.56
UBXN11-204ENST00000374217 VSIG10Q8N0Z9 540 aa18.55■□□□□ 0.56
UBXN11-204ENST00000374217 GNAT3A8MTJ3 354 aa18.54■□□□□ 0.56
UBXN11-204ENST00000374217 PPP1R9BQ96SB3 815 aa18.54■□□□□ 0.56
UBXN11-204ENST00000374217 ZMYND15Q9H091 742 aa18.54■□□□□ 0.56
UBXN11-204ENST00000374217 SPG7Q9UQ90 795 aa18.54■□□□□ 0.56
UBXN11-204ENST00000374217 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
UBXN11-204ENST00000374217 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
UBXN11-204ENST00000374217 CCDC9Q9Y3X0 531 aaKnown RBP18.53■□□□□ 0.56
UBXN11-204ENST00000374217 IL2RBP14784 551 aa18.53■□□□□ 0.56
UBXN11-204ENST00000374217 HS1BP3Q53T59 392 aa18.53■□□□□ 0.56
UBXN11-204ENST00000374217 DLG5Q8TDM6 1919 aa18.52■□□□□ 0.56
UBXN11-204ENST00000374217 LRP6O75581 1613 aa18.52■□□□□ 0.56
UBXN11-204ENST00000374217 ANP32BQ92688 251 aaKnown RBP18.52■□□□□ 0.56
UBXN11-204ENST00000374217 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 GOLGA6L22H0YM25 854 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
UBXN11-204ENST00000374217 DCTN1Q14203 1278 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 UNC5CLQ8IV45 518 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 TNPO1Q92973 898 aaKnown RBP18.51■□□□□ 0.55
UBXN11-204ENST00000374217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.55
UBXN11-204ENST00000374217 MEGF6O75095 1541 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 SLIT2O94813 1529 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 IL16Q14005 1332 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 NWD2Q9ULI1 1742 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 AKAP4Q5JQC9 854 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 MCM10Q7L590 875 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 MAP7D2Q96T17 732 aa18.51■□□□□ 0.55
UBXN11-204ENST00000374217 THUMPD2Q9BTF0 503 aaKnown RBP18.51■□□□□ 0.55
UBXN11-204ENST00000374217 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
UBXN11-204ENST00000374217 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
UBXN11-204ENST00000374217 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
UBXN11-204ENST00000374217 USP21Q9UK80 565 aa18.49■□□□□ 0.55
UBXN11-204ENST00000374217 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-204ENST00000374217 ZSCAN30Q86W11 494 aa18.49■□□□□ 0.55
UBXN11-204ENST00000374217 FNBP4Q8N3X1 1017 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-204ENST00000374217 SPRYD3Q8NCJ5 442 aa18.49■□□□□ 0.55
UBXN11-204ENST00000374217 ARXQ96QS3 562 aa18.49■□□□□ 0.55
UBXN11-204ENST00000374217 CHMP4BQ9H444 224 aaKnown RBP18.49■□□□□ 0.55
UBXN11-204ENST00000374217 NRAPQ86VF7 1730 aa18.48■□□□□ 0.55
UBXN11-204ENST00000374217 HSP90AB1P08238 724 aaKnown RBP18.48■□□□□ 0.55
UBXN11-204ENST00000374217 GNAI1P63096 354 aa18.48■□□□□ 0.55
UBXN11-204ENST00000374217 ZCRB1Q8TBF4 217 aaKnown RBP18.48■□□□□ 0.55
UBXN11-204ENST00000374217 PARP4Q9UKK3 1724 aaKnown RBP18.48■□□□□ 0.55
UBXN11-204ENST00000374217 BMP2KLQ5H9B9 411 aa18.47■□□□□ 0.55
UBXN11-204ENST00000374217 OVOS2A0A0G2JMS6 1433 aa18.47■□□□□ 0.55
UBXN11-204ENST00000374217 SPATA31A1Q5TZJ5 1347 aa18.47■□□□□ 0.55
UBXN11-204ENST00000374217 NUCB1Q02818 461 aa18.46■□□□□ 0.55
UBXN11-204ENST00000374217 IFNL2Q8IZJ0 200 aa18.46■□□□□ 0.55
UBXN11-204ENST00000374217 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
UBXN11-204ENST00000374217 OFD1O75665 1012 aa18.46■□□□□ 0.55
UBXN11-204ENST00000374217 KLHL40Q2TBA0 621 aa18.46■□□□□ 0.55
UBXN11-204ENST00000374217 ATF7IPQ6VMQ6 1270 aa18.46■□□□□ 0.55
UBXN11-204ENST00000374217 IFT57Q9NWB7 429 aa18.46■□□□□ 0.55
UBXN11-204ENST00000374217 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
UBXN11-204ENST00000374217 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
UBXN11-204ENST00000374217 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
UBXN11-204ENST00000374217 VPS72Q15906 364 aa18.45■□□□□ 0.54
UBXN11-204ENST00000374217 MPRIPQ6WCQ1 1025 aa18.45■□□□□ 0.54
UBXN11-204ENST00000374217 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms