RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 ERVV-2B6SEH9 535 aa19.04■□□□□ 0.64
SMPDL3B-201ENST00000373888 TAF7Q15545 349 aaPredicted RBP19.04■□□□□ 0.64
SMPDL3B-201ENST00000373888 SLC52A2Q9HAB3 445 aa19.04■□□□□ 0.64
SMPDL3B-201ENST00000373888 RXRBP28702 533 aa19.03■□□□□ 0.64
SMPDL3B-201ENST00000373888 LAS1LQ9Y4W2 734 aaKnown RBP19.03■□□□□ 0.64
SMPDL3B-201ENST00000373888 TSR2Q969E8 191 aaKnown RBP19.02■□□□□ 0.64
SMPDL3B-201ENST00000373888 MBIPQ9NS73 344 aa19.02■□□□□ 0.64
SMPDL3B-201ENST00000373888 POTEAQ6S8J7 498 aa19.01■□□□□ 0.63
SMPDL3B-201ENST00000373888 CABP4P57796 275 aa19■□□□□ 0.63
SMPDL3B-201ENST00000373888 BCL9O00512 1426 aa19■□□□□ 0.63
SMPDL3B-201ENST00000373888 KDM3BQ7LBC6 1761 aa19■□□□□ 0.63
SMPDL3B-201ENST00000373888 NFATC2IPQ8NCF5 419 aa19■□□□□ 0.63
SMPDL3B-201ENST00000373888 TSPYL4Q9UJ04 414 aa19■□□□□ 0.63
SMPDL3B-201ENST00000373888 DOT1LQ8TEK3 1739 aa18.99■□□□□ 0.63
SMPDL3B-201ENST00000373888 MIS18AQ9NYP9 233 aa18.99■□□□□ 0.63
SMPDL3B-201ENST00000373888 BTBD11A6QL63 1104 aa18.98■□□□□ 0.63
SMPDL3B-201ENST00000373888 RGS12O14924 1447 aa18.97■□□□□ 0.63
SMPDL3B-201ENST00000373888 BRWD3Q6RI45 1802 aa18.97■□□□□ 0.63
SMPDL3B-201ENST00000373888 TMOD3Q9NYL9 352 aa18.96■□□□□ 0.63
SMPDL3B-201ENST00000373888 ITGB4P16144 1822 aa18.96■□□□□ 0.63
SMPDL3B-201ENST00000373888 EXOSC9Q06265 439 aaKnown RBP18.95■□□□□ 0.62
SMPDL3B-201ENST00000373888 KRT27Q7Z3Y8 459 aa18.95■□□□□ 0.62
SMPDL3B-201ENST00000373888 PAPPAQ13219 1627 aa18.95■□□□□ 0.62
SMPDL3B-201ENST00000373888 CT47B1P0C2W7 299 aaPredicted RBP18.94■□□□□ 0.62
SMPDL3B-201ENST00000373888 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
SMPDL3B-201ENST00000373888 ZNF790Q6PG37 636 aa18.94■□□□□ 0.62
SMPDL3B-201ENST00000373888 PIGBQ92521 554 aa18.94■□□□□ 0.62
SMPDL3B-201ENST00000373888 NEFLP07196 543 aa18.93■□□□□ 0.62
SMPDL3B-201ENST00000373888 KCNQ3O43525 872 aa18.92■□□□□ 0.62
SMPDL3B-201ENST00000373888 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
SMPDL3B-201ENST00000373888 EIF4A1P60842 406 aaKnown RBP18.92■□□□□ 0.62
SMPDL3B-201ENST00000373888 SLC39A6Q13433 755 aa18.92■□□□□ 0.62
SMPDL3B-201ENST00000373888 ACSBG1Q96GR2 724 aa18.92■□□□□ 0.62
SMPDL3B-201ENST00000373888 NHSQ6T4R5 1651 aa18.91■□□□□ 0.62
SMPDL3B-201ENST00000373888 C8orf58Q8NAV2 365 aa18.91■□□□□ 0.62
SMPDL3B-201ENST00000373888 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
SMPDL3B-201ENST00000373888 HEG1Q9ULI3 1381 aa18.91■□□□□ 0.62
SMPDL3B-201ENST00000373888 UBR2Q8IWV8 1755 aa18.91■□□□□ 0.62
SMPDL3B-201ENST00000373888 FAM182BQ5T319 152 aa18.9■□□□□ 0.62
SMPDL3B-201ENST00000373888 TTC5Q8N0Z6 440 aa18.9■□□□□ 0.62
SMPDL3B-201ENST00000373888 SOS1Q07889 1333 aaPredicted RBP18.9■□□□□ 0.62
SMPDL3B-201ENST00000373888 KRT24Q2M2I5 525 aa18.9■□□□□ 0.62
SMPDL3B-201ENST00000373888 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
SMPDL3B-201ENST00000373888 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
SMPDL3B-201ENST00000373888 TSPYL6Q8N831 410 aa18.9■□□□□ 0.62
SMPDL3B-201ENST00000373888 KCPQ6ZWJ8 1503 aa18.89■□□□□ 0.62
SMPDL3B-201ENST00000373888 KCNQ2O43526 872 aa18.89■□□□□ 0.61
SMPDL3B-201ENST00000373888 VAMP4O75379 141 aa18.89■□□□□ 0.61
SMPDL3B-201ENST00000373888 ZNF428Q96B54 188 aa18.89■□□□□ 0.61
SMPDL3B-201ENST00000373888 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
SMPDL3B-201ENST00000373888 HOXB7P09629 217 aa18.88■□□□□ 0.61
SMPDL3B-201ENST00000373888 ATG3Q9NT62 314 aa18.88■□□□□ 0.61
SMPDL3B-201ENST00000373888 RCAN3Q9UKA8 241 aa18.88■□□□□ 0.61
SMPDL3B-201ENST00000373888 ZNF496Q96IT1 587 aaPredicted RBP18.87■□□□□ 0.61
SMPDL3B-201ENST00000373888 FMNL2Q96PY5 1086 aa18.87■□□□□ 0.61
SMPDL3B-201ENST00000373888 ASAP1Q9ULH1 1129 aa18.87■□□□□ 0.61
SMPDL3B-201ENST00000373888 ELL2O00472 640 aaPredicted RBP18.86■□□□□ 0.61
SMPDL3B-201ENST00000373888 SUPT16HQ9Y5B9 1047 aaKnown RBP18.86■□□□□ 0.61
SMPDL3B-201ENST00000373888 KAT6BQ8WYB5 2073 aa18.85■□□□□ 0.61
SMPDL3B-201ENST00000373888 GIGYF1O75420 1035 aaPredicted RBP18.85■□□□□ 0.61
SMPDL3B-201ENST00000373888 RARSP54136 660 aaKnown RBP18.84■□□□□ 0.61
SMPDL3B-201ENST00000373888 BTAF1O14981 1849 aa18.84■□□□□ 0.61
SMPDL3B-201ENST00000373888 BCL11BQ9C0K0 894 aaPredicted RBP18.84■□□□□ 0.61
SMPDL3B-201ENST00000373888 SNRPA1P09661 255 aaKnown RBP18.83■□□□□ 0.6
SMPDL3B-201ENST00000373888 ALDH1L2Q3SY69 923 aa18.83■□□□□ 0.6
SMPDL3B-201ENST00000373888 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.6
SMPDL3B-201ENST00000373888 SMARCC1Q92922 1105 aaPredicted RBP18.83■□□□□ 0.6
SMPDL3B-201ENST00000373888 C5P01031 1676 aa18.83■□□□□ 0.6
SMPDL3B-201ENST00000373888 PTCD1O75127 700 aaKnown RBP18.82■□□□□ 0.6
SMPDL3B-201ENST00000373888 VSIG10Q8N0Z9 540 aa18.82■□□□□ 0.6
SMPDL3B-201ENST00000373888 CHMP4AQ9BY43 222 aa18.82■□□□□ 0.6
SMPDL3B-201ENST00000373888 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
SMPDL3B-201ENST00000373888 SSH1Q8WYL5 1049 aa18.81■□□□□ 0.6
SMPDL3B-201ENST00000373888 LAMB4A4D0S4 1761 aa18.8■□□□□ 0.6
SMPDL3B-201ENST00000373888 PRAMEF22A3QJZ6 481 aa18.8■□□□□ 0.6
SMPDL3B-201ENST00000373888 CICQ96RK0 1608 aaPredicted RBP18.8■□□□□ 0.6
SMPDL3B-201ENST00000373888 BRPF1P55201 1214 aaPredicted RBP18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 HDGFL1Q5TGJ6 251 aa18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 CCDC30Q5VVM6 783 aa18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 ZNF831Q5JPB2 1677 aa18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 BCAR3O75815 825 aa18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 ERICH6BQ5W0A0 696 aa18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 SLC4A9Q96Q91 983 aa18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 SMC4Q9NTJ3 1288 aa18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 RNF123Q5XPI4 1314 aa18.79■□□□□ 0.6
SMPDL3B-201ENST00000373888 EP400Q96L91 3159 aa18.78■□□□□ 0.6
SMPDL3B-201ENST00000373888 TRIM37O94972 964 aa18.78■□□□□ 0.6
SMPDL3B-201ENST00000373888 FKBP8Q14318 412 aa18.78■□□□□ 0.6
SMPDL3B-201ENST00000373888 TEX13AQ9BXU3 409 aaPredicted RBP18.78■□□□□ 0.6
SMPDL3B-201ENST00000373888 LOC102724428A0A0B4J2F2 783 aa18.77■□□□□ 0.6
SMPDL3B-201ENST00000373888 EIF2S2P20042 333 aaKnown RBP18.77■□□□□ 0.6
SMPDL3B-201ENST00000373888 SIK1P57059 783 aa18.77■□□□□ 0.6
SMPDL3B-201ENST00000373888 BCL2L13Q9BXK5 485 aa18.77■□□□□ 0.6
SMPDL3B-201ENST00000373888 USP16Q9Y5T5 823 aa18.77■□□□□ 0.6
SMPDL3B-201ENST00000373888 TJP1Q07157 1748 aa18.77■□□□□ 0.59
SMPDL3B-201ENST00000373888 LY75O60449 1722 aa18.76■□□□□ 0.59
SMPDL3B-201ENST00000373888 MRPL50Q8N5N7 158 aaKnown RBP18.76■□□□□ 0.59
SMPDL3B-201ENST00000373888 TCERG1O14776 1098 aaKnown RBP18.75■□□□□ 0.59
SMPDL3B-201ENST00000373888 NECTIN2Q92692 538 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms