RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 C4BP0C0L5 1744 aa28.44■■■□□ 2.14
TMEM54-202ENST00000373463 LOC102724428A0A0B4J2F2 783 aa28.44■■■□□ 2.14
TMEM54-202ENST00000373463 SIK1P57059 783 aa28.44■■■□□ 2.14
TMEM54-202ENST00000373463 SLC4A9Q96Q91 983 aa28.44■■■□□ 2.14
TMEM54-202ENST00000373463 MYBBP1AQ9BQG0 1328 aaKnown RBP28.43■■■□□ 2.14
TMEM54-202ENST00000373463 FCHSD2O94868 740 aa28.43■■■□□ 2.14
TMEM54-202ENST00000373463 PRKRIP1Q9H875 184 aaPredicted RBP28.43■■■□□ 2.14
TMEM54-202ENST00000373463 PNPLA7Q6ZV29 1317 aa28.43■■■□□ 2.14
TMEM54-202ENST00000373463 ZNF831Q5JPB2 1677 aa28.42■■■□□ 2.14
TMEM54-202ENST00000373463 MAP3K5Q99683 1374 aa28.42■■■□□ 2.14
TMEM54-202ENST00000373463 ITPK1Q13572 414 aa28.42■■■□□ 2.14
TMEM54-202ENST00000373463 SIPA1L3O60292 1781 aaPredicted RBP28.4■■■□□ 2.14
TMEM54-202ENST00000373463 GAS2L2Q8NHY3 880 aa28.4■■■□□ 2.14
TMEM54-202ENST00000373463 SLC52A2Q9HAB3 445 aa28.4■■■□□ 2.14
TMEM54-202ENST00000373463 ZBTB7AO95365 584 aa28.39■■■□□ 2.14
TMEM54-202ENST00000373463 LINC00116Q8NCU8 138 aa28.39■■■□□ 2.14
TMEM54-202ENST00000373463 IL17REQ8NFR9 667 aa28.39■■■□□ 2.14
TMEM54-202ENST00000373463 UBR3Q6ZT12 1888 aa28.38■■■□□ 2.13
TMEM54-202ENST00000373463 COL5A3P25940 1745 aaPredicted RBP28.38■■■□□ 2.13
TMEM54-202ENST00000373463 AMIGO3Q86WK7 504 aa28.38■■■□□ 2.13
TMEM54-202ENST00000373463 GNAT3A8MTJ3 354 aa28.37■■■□□ 2.13
TMEM54-202ENST00000373463 TJP1Q07157 1748 aa28.36■■■□□ 2.13
TMEM54-202ENST00000373463 PLEKHF1Q96S99 279 aa28.36■■■□□ 2.13
TMEM54-202ENST00000373463 SPON1Q9HCB6 807 aa28.36■■■□□ 2.13
TMEM54-202ENST00000373463 TFCP2L1Q9NZI6 479 aa28.36■■■□□ 2.13
TMEM54-202ENST00000373463 CICQ96RK0 1608 aaPredicted RBP28.36■■■□□ 2.13
TMEM54-202ENST00000373463 COL24A1Q17RW2 1714 aa28.35■■■□□ 2.13
TMEM54-202ENST00000373463 ATP6V1AP38606 617 aa28.35■■■□□ 2.13
TMEM54-202ENST00000373463 CEMIPQ8WUJ3 1361 aa28.35■■■□□ 2.13
TMEM54-202ENST00000373463 DLG5Q8TDM6 1919 aa28.34■■■□□ 2.13
TMEM54-202ENST00000373463 PTGER2P43116 358 aa28.34■■■□□ 2.13
TMEM54-202ENST00000373463 RBM42Q9BTD8 480 aaKnown RBP28.34■■■□□ 2.13
TMEM54-202ENST00000373463 KCPQ6ZWJ8 1503 aa28.33■■■□□ 2.13
TMEM54-202ENST00000373463 UBR2Q8IWV8 1755 aa28.33■■■□□ 2.13
TMEM54-202ENST00000373463 SMIM5Q71RC9 77 aa28.33■■■□□ 2.13
TMEM54-202ENST00000373463 ATF5Q9Y2D1 282 aaPredicted RBP28.33■■■□□ 2.13
TMEM54-202ENST00000373463 PTCD1O75127 700 aaKnown RBP28.32■■■□□ 2.12
TMEM54-202ENST00000373463 SLC39A6Q13433 755 aa28.32■■■□□ 2.12
TMEM54-202ENST00000373463 COL23A1Q86Y22 540 aaPredicted RBP28.32■■■□□ 2.12
TMEM54-202ENST00000373463 SGIP1Q9BQI5 828 aa28.32■■■□□ 2.12
TMEM54-202ENST00000373463 MTFR1LQ9H019 292 aa28.32■■■□□ 2.12
TMEM54-202ENST00000373463 MYH14Q7Z406 1995 aaKnown RBP28.3■■■□□ 2.12
TMEM54-202ENST00000373463 AK7Q96M32 723 aa28.27■■■□□ 2.12
TMEM54-202ENST00000373463 DCTN1Q14203 1278 aa28.26■■■□□ 2.11
TMEM54-202ENST00000373463 SLC16A10Q8TF71 515 aa28.26■■■□□ 2.11
TMEM54-202ENST00000373463 MCM10Q7L590 875 aa28.25■■■□□ 2.11
TMEM54-202ENST00000373463 HMGB2P26583 209 aaKnown RBP28.24■■■□□ 2.11
TMEM54-202ENST00000373463 TEFQ10587 303 aa28.24■■■□□ 2.11
TMEM54-202ENST00000373463 CNTNAP4Q9C0A0 1308 aa28.23■■■□□ 2.11
TMEM54-202ENST00000373463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.22■■■□□ 2.11
TMEM54-202ENST00000373463 GNPATO15228 680 aa28.22■■■□□ 2.11
TMEM54-202ENST00000373463 HTATSF1O43719 755 aaKnown RBP28.21■■■□□ 2.11
TMEM54-202ENST00000373463 PHF14O94880 888 aa28.21■■■□□ 2.11
TMEM54-202ENST00000373463 NFE2L2Q16236 605 aa28.21■■■□□ 2.11
TMEM54-202ENST00000373463 CCDC184Q52MB2 194 aa28.21■■■□□ 2.11
TMEM54-202ENST00000373463 RC3H1Q5TC82 1133 aaKnown RBP28.21■■■□□ 2.11
TMEM54-202ENST00000373463 DNAJC10Q8IXB1 793 aa28.21■■■□□ 2.11
TMEM54-202ENST00000373463 SSFA2P28290 1259 aa28.2■■■□□ 2.1
TMEM54-202ENST00000373463 KCNQ3O43525 872 aa28.19■■■□□ 2.1
TMEM54-202ENST00000373463 ZNF790Q6PG37 636 aa28.19■■■□□ 2.1
TMEM54-202ENST00000373463 FLAD1Q8NFF5 587 aa28.19■■■□□ 2.1
TMEM54-202ENST00000373463 C4AP0C0L4 1744 aa28.18■■■□□ 2.1
TMEM54-202ENST00000373463 MSH5O43196 834 aa28.18■■■□□ 2.1
TMEM54-202ENST00000373463 CRKLP46109 303 aaKnown RBP28.18■■■□□ 2.1
TMEM54-202ENST00000373463 RTF1Q92541 710 aaKnown RBP28.18■■■□□ 2.1
TMEM54-202ENST00000373463 ZNF496Q96IT1 587 aaPredicted RBP28.18■■■□□ 2.1
TMEM54-202ENST00000373463 ADAMTS8Q9UP79 889 aa28.18■■■□□ 2.1
TMEM54-202ENST00000373463 MSL1Q68DK7 614 aa28.17■■■□□ 2.1
TMEM54-202ENST00000373463 PPP1R1BQ9UD71 204 aaPredicted RBP28.17■■■□□ 2.1
TMEM54-202ENST00000373463 MAPK8IP3Q9UPT6 1336 aa28.17■■■□□ 2.1
TMEM54-202ENST00000373463 NEFMP07197 916 aa28.16■■■□□ 2.1
TMEM54-202ENST00000373463 INTS5Q6P9B9 1019 aaKnown RBP28.16■■■□□ 2.1
TMEM54-202ENST00000373463 CCDC146Q8IYE0 955 aa28.16■■■□□ 2.1
TMEM54-202ENST00000373463 PNNQ9H307 717 aaKnown RBP28.16■■■□□ 2.1
TMEM54-202ENST00000373463 RPS6KA4O75676 772 aa28.15■■■□□ 2.1
TMEM54-202ENST00000373463 CYP19A1P11511 503 aaPredicted RBP28.15■■■□□ 2.1
TMEM54-202ENST00000373463 THUMPD2Q9BTF0 503 aaKnown RBP28.15■■■□□ 2.1
TMEM54-202ENST00000373463 BTBD11A6QL63 1104 aa28.14■■■□□ 2.1
TMEM54-202ENST00000373463 WDR43Q15061 677 aaKnown RBP eCLIP28.14■■■□□ 2.1
TMEM54-202ENST00000373463 VSIG10Q8N0Z9 540 aa28.14■■■□□ 2.1
TMEM54-202ENST00000373463 RTCBQ9Y3I0 505 aaKnown RBP28.14■■■□□ 2.1
TMEM54-202ENST00000373463 HEG1Q9ULI3 1381 aa28.13■■■□□ 2.09
TMEM54-202ENST00000373463 TTC5Q8N0Z6 440 aa28.13■■■□□ 2.09
TMEM54-202ENST00000373463 KDM3BQ7LBC6 1761 aa28.13■■■□□ 2.09
TMEM54-202ENST00000373463 TMPOP42166 694 aaKnown RBP28.12■■■□□ 2.09
TMEM54-202ENST00000373463 ARXQ96QS3 562 aa28.12■■■□□ 2.09
TMEM54-202ENST00000373463 ARHGEF1Q92888 912 aaKnown RBP28.11■■■□□ 2.09
TMEM54-202ENST00000373463 FHDC1Q9C0D6 1143 aaPredicted RBP28.1■■■□□ 2.09
TMEM54-202ENST00000373463 CCDC87Q9NVE4 849 aa28.1■■■□□ 2.09
TMEM54-202ENST00000373463 TAF7Q15545 349 aaPredicted RBP28.09■■■□□ 2.09
TMEM54-202ENST00000373463 TRAPPC3LQ5T215 181 aa28.09■■■□□ 2.09
TMEM54-202ENST00000373463 RUNDC1Q96C34 613 aa28.09■■■□□ 2.09
TMEM54-202ENST00000373463 MIS18AQ9NYP9 233 aa28.09■■■□□ 2.09
TMEM54-202ENST00000373463 RRP7AQ9Y3A4 280 aaKnown RBP28.09■■■□□ 2.09
TMEM54-202ENST00000373463 ADRA2BP18089 450 aa28.08■■■□□ 2.09
TMEM54-202ENST00000373463 RIPK4P57078 832 aa28.08■■■□□ 2.09
TMEM54-202ENST00000373463 ZBTB1Q9Y2K1 713 aa28.08■■■□□ 2.09
TMEM54-202ENST00000373463 FMNL2Q96PY5 1086 aa28.07■■■□□ 2.08
TMEM54-202ENST00000373463 SOS1Q07889 1333 aaPredicted RBP28.07■■■□□ 2.08
TMEM54-202ENST00000373463 ANP32CO43423 234 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms