RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 MPRIPQ6WCQ1 1025 aa13.66□□□□□ -0.22
RPRD1B-201ENST00000373433 RBSNQ9H1K0 784 aa13.66□□□□□ -0.22
RPRD1B-201ENST00000373433 KIF16BQ96L93 1317 aa13.66□□□□□ -0.22
RPRD1B-201ENST00000373433 TERF1P54274 439 aa13.65□□□□□ -0.22
RPRD1B-201ENST00000373433 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
RPRD1B-201ENST00000373433 ANKRD45Q5TZF3 282 aa13.65□□□□□ -0.22
RPRD1B-201ENST00000373433 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
RPRD1B-201ENST00000373433 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
RPRD1B-201ENST00000373433 TMEM57Q8N5G2 664 aa13.65□□□□□ -0.22
RPRD1B-201ENST00000373433 AMOTQ4VCS5 1084 aa13.65□□□□□ -0.23
RPRD1B-201ENST00000373433 AK9Q5TCS8 1911 aa13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 SSH1Q8WYL5 1049 aa13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 AATKQ6ZMQ8 1374 aa13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 PRIM1P49642 420 aaKnown RBP13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 FKBP5Q13451 457 aaPredicted RBP13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 ATF7IPQ6VMQ6 1270 aa13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 RNF214Q8ND24 703 aa13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 IFT57Q9NWB7 429 aa13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 CHD1LQ86WJ1 897 aa13.64□□□□□ -0.23
RPRD1B-201ENST00000373433 BRINP3Q76B58 766 aa13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 NAP1L2Q9ULW6 460 aaPredicted RBP13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 CHMP3Q9Y3E7 222 aa13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 KIF2CQ99661 725 aa13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 SMAP1Q8IYB5 467 aaPredicted RBP13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 ZKSCAN5Q9Y2L8 839 aa13.63□□□□□ -0.23
RPRD1B-201ENST00000373433 TULP1O00294 542 aaPredicted RBP13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 DYNC1I1O14576 645 aa13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 FOXD4L5Q5VV16 416 aaPredicted RBP13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 MTERF4Q7Z6M4 381 aaKnown RBP13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 FOXD4L4Q8WXT5 416 aaPredicted RBP13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 ZNF500O60304 480 aaPredicted RBP13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 NUCB1Q02818 461 aa13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 MPNDQ8N594 471 aa13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
RPRD1B-201ENST00000373433 CABP4P57796 275 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 ZNF445P59923 1031 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 HS1BP3Q53T59 392 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 MBIPQ9NS73 344 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 ARHGEF10O15013 1369 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 DIP2AQ14689 1571 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 HDGFL1Q5TGJ6 251 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 SASS6Q6UVJ0 657 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.61□□□□□ -0.23
RPRD1B-201ENST00000373433 PKP1Q13835 747 aa13.6□□□□□ -0.23
RPRD1B-201ENST00000373433 BMP2KLQ5H9B9 411 aa13.6□□□□□ -0.23
RPRD1B-201ENST00000373433 SYCE3A1L190 88 aa13.6□□□□□ -0.23
RPRD1B-201ENST00000373433 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
RPRD1B-201ENST00000373433 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
RPRD1B-201ENST00000373433 IBTKQ9P2D0 1353 aaPredicted RBP13.6□□□□□ -0.23
RPRD1B-201ENST00000373433 ARHGEF25Q86VW2 580 aa13.59□□□□□ -0.23
RPRD1B-201ENST00000373433 KAT6BQ8WYB5 2073 aa13.59□□□□□ -0.23
RPRD1B-201ENST00000373433 CPS1P31327 1500 aa13.59□□□□□ -0.23
RPRD1B-201ENST00000373433 NUCB2P80303 420 aa13.59□□□□□ -0.23
RPRD1B-201ENST00000373433 C1orf167Q5SNV9 1468 aa13.59□□□□□ -0.23
RPRD1B-201ENST00000373433 IL16Q14005 1332 aa13.59□□□□□ -0.23
RPRD1B-201ENST00000373433 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
RPRD1B-201ENST00000373433 AIMP1Q12904 312 aaKnown RBP13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 TSC1Q92574 1164 aa13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 CHAMP1Q96JM3 812 aa13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 ZBTB40Q9NUA8 1239 aa13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 LMBRD1Q9NUN5 540 aa13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 MYOM1P52179 1685 aa13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 KCNJ4P48050 445 aa13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 PLEKHF1Q96S99 279 aa13.58□□□□□ -0.24
RPRD1B-201ENST00000373433 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
RPRD1B-201ENST00000373433 PDLIM2Q96JY6 352 aa13.57□□□□□ -0.24
RPRD1B-201ENST00000373433 CDC42BPGQ6DT37 1551 aa13.57□□□□□ -0.24
RPRD1B-201ENST00000373433 MED14O60244 1454 aa13.57□□□□□ -0.24
RPRD1B-201ENST00000373433 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
RPRD1B-201ENST00000373433 CBX1P83916 185 aa13.56□□□□□ -0.24
RPRD1B-201ENST00000373433 ADAMTSL3P82987 1691 aa13.56□□□□□ -0.24
RPRD1B-201ENST00000373433 CCDC94Q9BW85 323 aaPredicted RBP13.56□□□□□ -0.24
RPRD1B-201ENST00000373433 KIAA0232Q92628 1395 aa13.55□□□□□ -0.24
RPRD1B-201ENST00000373433 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
RPRD1B-201ENST00000373433 FAM177BA6PVY3 158 aa13.55□□□□□ -0.24
RPRD1B-201ENST00000373433 CDC45O75419 566 aa13.55□□□□□ -0.24
RPRD1B-201ENST00000373433 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
RPRD1B-201ENST00000373433 GPT2Q8TD30 523 aa13.55□□□□□ -0.24
RPRD1B-201ENST00000373433 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
RPRD1B-201ENST00000373433 AKAP4Q5JQC9 854 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms