RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 GNAI2P04899 355 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
CSMD2-205ENST00000373381 GMNNO75496 209 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 DAAM2Q86T65 1068 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 PDIA4P13667 645 aaKnown RBP10.55□□□□□ -0.72
CSMD2-205ENST00000373381 CCDC89Q8N998 374 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 MICALCLQ6ZW33 695 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 CCDC12Q8WUD4 166 aaPredicted RBP10.55□□□□□ -0.72
CSMD2-205ENST00000373381 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 SMTNL1A8MU46 457 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 VIMP08670 466 aaKnown RBP10.55□□□□□ -0.72
CSMD2-205ENST00000373381 PLVAPQ9BX97 442 aa10.55□□□□□ -0.72
CSMD2-205ENST00000373381 TTC12Q9H892 705 aaPredicted RBP10.55□□□□□ -0.72
CSMD2-205ENST00000373381 GAS8O95995 478 aa10.54□□□□□ -0.72
CSMD2-205ENST00000373381 KIF5AQ12840 1032 aa10.54□□□□□ -0.72
CSMD2-205ENST00000373381 C22orf23Q9BZE7 217 aa10.54□□□□□ -0.72
CSMD2-205ENST00000373381 GOLGA4Q13439 2230 aaKnown RBP10.54□□□□□ -0.72
CSMD2-205ENST00000373381 CEP126Q9P2H0 1117 aa10.54□□□□□ -0.72
CSMD2-205ENST00000373381 CCDC172P0C7W6 258 aa10.54□□□□□ -0.72
CSMD2-205ENST00000373381 NACADO15069 1562 aa10.54□□□□□ -0.72
CSMD2-205ENST00000373381 SPECC1LQ69YQ0 1117 aa10.54□□□□□ -0.72
CSMD2-205ENST00000373381 ZNF444Q8N0Y2 327 aaPredicted RBP10.54□□□□□ -0.72
CSMD2-205ENST00000373381 FIBPO43427 364 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 DDX11Q96FC9 970 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.53□□□□□ -0.72
CSMD2-205ENST00000373381 GBP3Q9H0R5 595 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 KRT32Q14532 448 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 FAM177A1Q8N128 213 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-205ENST00000373381 TMCO5BA8MYB1 307 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 USO1O60763 962 aaKnown RBP10.53□□□□□ -0.72
CSMD2-205ENST00000373381 CKAP2LQ8IYA6 745 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 KIAA1524Q8TCG1 905 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 CCDC178Q5BJE1 867 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 PSMC4P43686 418 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 APBB1IPQ7Z5R6 666 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-205ENST00000373381 SIL1Q9H173 461 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 LNPKQ9C0E8 428 aa10.53□□□□□ -0.72
CSMD2-205ENST00000373381 IFIT1P09914 478 aaKnown RBP10.52□□□□□ -0.72
CSMD2-205ENST00000373381 SRCIN1Q9C0H9 1055 aa10.52□□□□□ -0.72
CSMD2-205ENST00000373381 U3KPZ7 1027 aaPredicted RBP10.52□□□□□ -0.72
CSMD2-205ENST00000373381 HDGFL1Q5TGJ6 251 aa10.52□□□□□ -0.72
CSMD2-205ENST00000373381 SMC1BQ8NDV3 1235 aa10.52□□□□□ -0.73
CSMD2-205ENST00000373381 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
CSMD2-205ENST00000373381 NEK4P51957 841 aa10.52□□□□□ -0.73
CSMD2-205ENST00000373381 NLRP5P59047 1200 aa10.52□□□□□ -0.73
CSMD2-205ENST00000373381 SPC24Q8NBT2 197 aa10.52□□□□□ -0.73
CSMD2-205ENST00000373381 STK3Q13188 491 aa10.52□□□□□ -0.73
CSMD2-205ENST00000373381 HAUS7Q99871 368 aa10.52□□□□□ -0.73
CSMD2-205ENST00000373381 IQCGQ9H095 443 aaKnown RBP10.52□□□□□ -0.73
CSMD2-205ENST00000373381 CLEC11AQ9Y240 323 aa10.52□□□□□ -0.73
CSMD2-205ENST00000373381 CABP5Q9NP86 173 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 NOL3O60936 208 aaKnown RBP10.51□□□□□ -0.73
CSMD2-205ENST00000373381 KRT85P78386 507 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 NAA15Q9BXJ9 866 aaKnown RBP10.51□□□□□ -0.73
CSMD2-205ENST00000373381 MYL6BP14649 208 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
CSMD2-205ENST00000373381 RNF214Q8ND24 703 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 ABCF2Q9UG63 623 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 RIOK3O14730 519 aaKnown RBP10.51□□□□□ -0.73
CSMD2-205ENST00000373381 CFAP58Q5T655 872 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 NAP1L3Q99457 506 aaPredicted RBP10.51□□□□□ -0.73
CSMD2-205ENST00000373381 CCT4P50991 539 aaKnown RBP10.51□□□□□ -0.73
CSMD2-205ENST00000373381 TBC1D5Q92609 795 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 POLR3GO15318 223 aaPredicted RBP10.51□□□□□ -0.73
CSMD2-205ENST00000373381 KIF5CO60282 957 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 IDH1O75874 414 aaKnown RBP10.51□□□□□ -0.73
CSMD2-205ENST00000373381 SOGA1O94964 1423 aa10.51□□□□□ -0.73
CSMD2-205ENST00000373381 TPD52P55327 224 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-205ENST00000373381 PPP4R3BQ5MIZ7 849 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 KIF5BP33176 963 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 A0A1W2PRG0 241 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
CSMD2-205ENST00000373381 APAF1O14727 1248 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 LPXNO60711 386 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 AMPD3Q01432 767 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 ZNF530Q6P9A1 599 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-205ENST00000373381 AACSQ86V21 672 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 UPF3BQ9BZI7 483 aaKnown RBP10.5□□□□□ -0.73
CSMD2-205ENST00000373381 FAM107BQ9H098 131 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 CNGA1P29973 690 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 METTL24Q5JXM2 366 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 IFI16Q16666 785 aaKnown RBP10.5□□□□□ -0.73
CSMD2-205ENST00000373381 CEP112Q8N8E3 955 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 SPECC1Q5M775 1068 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 LARP1BQ659C4 914 aaKnown RBP10.5□□□□□ -0.73
CSMD2-205ENST00000373381 CTCFLQ8NI51 663 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-205ENST00000373381 STX6O43752 255 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 IMPG2Q9BZV3 1241 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 PDE4AP27815 886 aa10.5□□□□□ -0.73
CSMD2-205ENST00000373381 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
CSMD2-205ENST00000373381 TRAF1Q13077 416 aa10.49□□□□□ -0.73
CSMD2-205ENST00000373381 PODXL2Q9NZ53 605 aa10.49□□□□□ -0.73
CSMD2-205ENST00000373381 SERPINA10Q9UK55 444 aa10.49□□□□□ -0.73
CSMD2-205ENST00000373381 IQCA1Q86XH1 822 aa10.49□□□□□ -0.73
CSMD2-205ENST00000373381 RNF41Q9H4P4 317 aaPredicted RBP10.49□□□□□ -0.73
CSMD2-205ENST00000373381 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
CSMD2-205ENST00000373381 CUL4BQ13620 913 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms